RNA–Protein interactions for RNA: YBR293W

VBA2, Transcript of Permease of basic amino acids in the vacuolar membrane, yeast

Gene VBA2, Length 1,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VBA2	YBR293W	SLX9	P53251	210 aa	Predicted RBP	4.13	□□□□□ -1.75
VBA2	YBR293W	HOL1	P53389	586 aa		4.13	□□□□□ -1.75
VBA2	YBR293W	IBD2	P53892	351 aa		4.13	□□□□□ -1.75
VBA2	YBR293W	YDR366C	P87287	132 aa		4.13	□□□□□ -1.75
VBA2	YBR293W	YSA1	Q01976	231 aa		4.13	□□□□□ -1.75
VBA2	YBR293W	YPL014W	Q02606	381 aa		4.13	□□□□□ -1.75
VBA2	YBR293W	RSM10	Q03201	203 aa		4.13	□□□□□ -1.75
VBA2	YBR293W	FIT1	Q04433	528 aa		4.13	□□□□□ -1.75
VBA2	YBR293W	SHH3	Q04487	196 aa		4.13	□□□□□ -1.75
VBA2	YBR293W	SEC13	Q04491	297 aa	Known RBP	4.13	□□□□□ -1.75
VBA2	YBR293W	SUE1	Q06524	206 aa		4.13	□□□□□ -1.75
VBA2	YBR293W	MRX9	Q07349	420 aa	Known RBP	4.13	□□□□□ -1.75
VBA2	YBR293W	REX4	Q08237	289 aa		4.13	□□□□□ -1.75
VBA2	YBR293W	SRO7	Q12038	1033 aa		4.13	□□□□□ -1.75
VBA2	YBR293W	NBP2	Q12163	236 aa		4.13	□□□□□ -1.75
VBA2	YBR293W	YOL114C	Q12322	202 aa		4.13	□□□□□ -1.75
VBA2	YBR293W	YPR071W	Q12346	211 aa		4.13	□□□□□ -1.75
VBA2	YBR293W	TFC7	Q12415	435 aa		4.13	□□□□□ -1.75
VBA2	YBR293W	PRM4	Q12498	284 aa		4.13	□□□□□ -1.75
VBA2	YBR293W	FIG2	P25653	1609 aa		4.13	□□□□□ -1.75
VBA2	YBR293W	STE4	P18851	423 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	HOP1	P20050	605 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	KIN82	P25341	720 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	MRP17	P28778	131 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	PEX4	P29340	183 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	ERG1	P32476	496 aa	Known RBP	4.12	□□□□□ -1.75
VBA2	YBR293W	YEF1	P32622	495 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	YMC2	P38087	329 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	AIM3	P38266	947 aa	Known RBP	4.12	□□□□□ -1.75
VBA2	YBR293W	DBP8	P38719	431 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	YHR035W	P38769	630 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	HTD2	P38790	280 aa	Known RBP	4.12	□□□□□ -1.75
VBA2	YBR293W	YHR122W	P38829	231 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	ARO9	P38840	513 aa	Predicted RBP	4.12	□□□□□ -1.75
VBA2	YBR293W	VPS52	P39904	641 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	FIS1	P40515	155 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	GAB1	P41733	394 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	YJR011C	P47086	261 aa	Predicted RBP	4.12	□□□□□ -1.75
VBA2	YBR293W	ASK10	P48361	1146 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	BUL1	P48524	976 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	YDL183C	P48569	320 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	SOL1	P50278	321 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	YGL114W	P53134	725 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	COG7	P53195	279 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	MEP3	P53390	489 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	RPT4	P53549	437 aa	Known RBP	4.12	□□□□□ -1.75
VBA2	YBR293W	FRE4	P53746	719 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	DUS1	P53759	423 aa	Known RBP	4.12	□□□□□ -1.75
VBA2	YBR293W	TPS1	Q00764	495 aa	Known RBP	4.12	□□□□□ -1.75
VBA2	YBR293W	AAT1	Q01802	451 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	MET14	Q02196	202 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	NUP100	Q02629	959 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	TRM44	Q02648	567 aa	Known RBP	4.12	□□□□□ -1.75
VBA2	YBR293W	STD1	Q02794	444 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	DIG2	Q03373	323 aa	Known RBP	4.12	□□□□□ -1.75
VBA2	YBR293W	EMI1	Q04406	187 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	AIM32	Q04689	311 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	YLR179C	Q06252	201 aa	Known RBP	4.12	□□□□□ -1.75
VBA2	YBR293W	YPR127W	Q06494	345 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	YPR147C	Q06522	304 aa	Known RBP	4.12	□□□□□ -1.75
VBA2	YBR293W	GPB1	Q08886	897 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	UBX3	Q12229	455 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	AHA1	Q12449	350 aa	Known RBP	4.12	□□□□□ -1.75
VBA2	YBR293W	YNR034W-A	Q3E841	98 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	UBR1	P19812	1950 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	COX5B	P00425	151 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	PUT1	P09368	476 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	YML003W	P0CF16	290 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	ASP3-2	P0CX77	362 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	ASP3-3	P0CX78	362 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	ASP3-4	P0CX79	362 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	ASP3-1	P0CZ17	362 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	SNF5	P18480	905 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	SEC22	P22214	214 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	PBN1	P25580	416 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	PRO1	P32264	428 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	RMA1	P36001	430 aa	Known RBP	4.12	□□□□□ -1.75
VBA2	YBR293W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
VBA2	YBR293W	MRPL11	P36521	249 aa	Predicted RBP	4.12	□□□□□ -1.75
VBA2	YBR293W	FAT1	P38225	669 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	SRP68	P38687	599 aa	Known RBP	4.12	□□□□□ -1.75
VBA2	YBR293W	EFM1	P38732	585 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	SFB3	P38810	929 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	EMC5	P40540	141 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	PAU15	P40585	124 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	FKH2	P41813	862 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	PFS2	P42841	465 aa	Known RBP	4.12	□□□□□ -1.75
VBA2	YBR293W	YJR111C	P47148	283 aa	Known RBP	4.12	□□□□□ -1.75
VBA2	YBR293W	AAH1	P53909	347 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	YNL134C	P53912	376 aa	Known RBP	4.12	□□□□□ -1.75
VBA2	YBR293W	RHO4	Q00246	291 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	YPL067C	Q02754	198 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	SSL1	Q04673	461 aa	Predicted RBP	4.12	□□□□□ -1.75
VBA2	YBR293W	MSC3	Q05812	728 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	LDB18	Q07887	179 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	ATG41	Q12048	136 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	UPC2	Q12151	913 aa		4.12	□□□□□ -1.75
VBA2	YBR293W	RAS2	P01120	322 aa	Known RBP	4.11	□□□□□ -1.75
VBA2	YBR293W	PRB1	P09232	635 aa		4.11	□□□□□ -1.75
VBA2	YBR293W	UNG1	P12887	359 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 66.2 ms