RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 BIRC5O15392 142 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 MMP1P03956 469 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 CAPN1P07384 714 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 LMNB1P20700 586 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 CIITAP33076 1130 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 HSPA1LP34931 641 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 ADCY8P40145 1251 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 CEBPAP49715 358 aaPredicted RBP7.86□□□□□ -1.15
PDE6A-205ENST00000617647 TUBA1BP68363 451 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 WASHC5Q12768 1159 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 KIAA1755Q5JYT7 1200 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 EMC10Q5UCC4 262 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 RNF43Q68DV7 783 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 RNF19BQ6ZMZ0 732 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 TUBA1AQ71U36 451 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 SAMD3Q8N6K7 520 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 CFAP57Q96MR6 1250 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 BTBD10Q9BSF8 475 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 SENP2Q9HC62 589 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 AIPL1Q9NZN9 384 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 PREX1Q8TCU6 1659 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 CDC42BPGQ6DT37 1551 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 SPOPO43791 374 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 MAN1A2O60476 641 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 TRMUO75648 421 aaKnown RBP7.86□□□□□ -1.15
PDE6A-205ENST00000617647 ITGA4P13612 1032 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 CHN2P52757 468 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 NLRP6P59044 892 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 OVGP1Q12889 678 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 PDAP1Q13442 181 aaKnown RBP7.86□□□□□ -1.15
PDE6A-205ENST00000617647 PDK3Q15120 406 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 USPL1Q5W0Q7 1092 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 CNNM4Q6P4Q7 775 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 RFWD3Q6PCD5 774 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 C4orf50Q6ZRC1 276 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 TOM1L2Q6ZVM7 507 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 C11orf74Q86VG3 221 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 LRRC6Q86X45 466 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 TREML1Q86YW5 311 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 GLG1Q92896 1179 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 CLIP3Q96DZ5 547 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 MAGEB18Q96M61 343 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 PRPF18Q99633 342 aaKnown RBP7.86□□□□□ -1.15
PDE6A-205ENST00000617647 NACAP1Q9BZK3 213 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 DHX36Q9H2U1 1008 aaKnown RBP7.86□□□□□ -1.15
PDE6A-205ENST00000617647 STRN4Q9NRL3 753 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 ATP6V0A2Q9Y487 856 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 MAD1L1Q9Y6D9 718 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 WASF2Q9Y6W5 498 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 SH3TC1Q8TE82 1336 aa7.86□□□□□ -1.15
PDE6A-205ENST00000617647 CPSF1Q10570 1443 aaKnown RBP7.85□□□□□ -1.15
PDE6A-205ENST00000617647 CYTH3O43739 400 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 TOM1O60784 492 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 PPARGP37231 505 aaPredicted RBP7.85□□□□□ -1.15
PDE6A-205ENST00000617647 NUP107P57740 925 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 TIMM10P62072 90 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 MRPS15P82914 257 aaKnown RBP7.85□□□□□ -1.15
PDE6A-205ENST00000617647 KRT76Q01546 638 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 C1orf141Q5JVX7 400 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 APOA5Q6Q788 366 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 MFSD6Q6ZSS7 791 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 SFR1Q86XK3 245 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 RNF169Q8NCN4 708 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 FBXO25Q8TCJ0 367 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 DDI1Q8WTU0 396 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 MKL1Q969V6 931 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 OMA1Q96E52 524 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 MAK16Q9BXY0 300 aaKnown RBP7.85□□□□□ -1.15
PDE6A-205ENST00000617647 ADAM33Q9BZ11 813 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 NEUROG2Q9H2A3 272 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 FOXP1Q9H334 677 aaPredicted RBP7.85□□□□□ -1.15
PDE6A-205ENST00000617647 ARHGAP20Q9P2F6 1191 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 PRKAG3Q9UGI9 489 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 DBNLQ9UJU6 430 aaKnown RBP7.85□□□□□ -1.15
PDE6A-205ENST00000617647 MYO5BQ9ULV0 1848 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 KIF20BQ96Q89 1820 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 EXOC1LA0A1B0GW35 172 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 MINDY4BA8MYZ0 360 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 ATP2A1O14983 1001 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 USP1O94782 785 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 DDX5P17844 614 aaKnown RBP7.85□□□□□ -1.15
PDE6A-205ENST00000617647 RAP1GDS1P52306 607 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 MDM2Q00987 491 aaPredicted RBP7.85□□□□□ -1.15
PDE6A-205ENST00000617647 TRIP13Q15645 432 aaPredicted RBP7.85□□□□□ -1.15
PDE6A-205ENST00000617647 PLEKHA7Q6IQ23 1121 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 KLHL35Q6PF15 583 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 UTS2BQ765I0 119 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 EXOC3L1Q86VI1 746 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 NLRP10Q86W26 655 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 ERP44Q9BS26 406 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 ALG13Q9NP73 1137 aaKnown RBP7.85□□□□□ -1.15
PDE6A-205ENST00000617647 CYLDQ9NQC7 956 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 DDX28Q9NUL7 540 aaKnown RBP7.85□□□□□ -1.15
PDE6A-205ENST00000617647 HEY2Q9UBP5 337 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 UMODL1Q5DID0 1318 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 MED23Q9ULK4 1368 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 A0A0G2JLW4 131 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 DDX3XO00571 662 aaKnown RBP eCLIP7.85□□□□□ -1.15
PDE6A-205ENST00000617647 TBX10O75333 385 aa7.85□□□□□ -1.15
PDE6A-205ENST00000617647 FGAP02671 866 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms