RNA–Protein interactions for RNA: ENST00000586900.1

PKN1-208, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 550 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-208	ENST00000586900	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	TTLL13P	A6NNM8	815 aa		13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	EIF3D	O15371	548 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	RHOBTB3	O94955	611 aa		13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	SMC2	O95347	1197 aa		13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	GCNT3	O95395	438 aa		13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	PRR29	P0C7W0	189 aa		13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	PROZ	P22891	400 aa		13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	SMAD3	P84022	425 aa	Known RBP	13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	KMT5B	Q4FZB7	885 aa		13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	L1TD1	Q5T7N2	865 aa	Known RBP	13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	ATF7IP2	Q5U623	682 aa		13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	ZNF598	Q86UK7	904 aa	Known RBP	13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	ZNF507	Q8TCN5	953 aa		13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	PGBD4	Q96DM1	585 aa		13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	GSDMA	Q96QA5	445 aa		13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	ACCS	Q96QU6	501 aa		13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	ADPGK	Q9BRR6	497 aa		13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	TARS2	Q9BW92	718 aa	Known RBP	13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	PDZD7	Q9H5P4	517 aa		13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	TMEM206	Q9H813	350 aa		13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	PTPRH	Q9HD43	1115 aa		13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	EXOC1	Q9NV70	894 aa		13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	TBC1D7	Q9P0N9	293 aa		13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	EXOC7	Q9UPT5	735 aa		13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	PCDHB7	Q9Y5E2	793 aa		13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	RANBP2	P49792	3224 aa	Known RBP	13.53	□□□□□ -0.24
PKN1-208	ENST00000586900	RBAK-RBAKDN	I3L0D1	243 aa		13.52	□□□□□ -0.25
PKN1-208	ENST00000586900	HOXA2	O43364	376 aa		13.52	□□□□□ -0.25
PKN1-208	ENST00000586900	TOM1L1	O75674	476 aa		13.52	□□□□□ -0.25
PKN1-208	ENST00000586900	MCM4	P33991	863 aa		13.52	□□□□□ -0.25
PKN1-208	ENST00000586900	HTRA4	P83105	476 aa	Predicted RBP	13.52	□□□□□ -0.25
PKN1-208	ENST00000586900	PNOC	Q13519	176 aa		13.52	□□□□□ -0.25
PKN1-208	ENST00000586900	TMEM132A	Q24JP5	1023 aa		13.52	□□□□□ -0.25
PKN1-208	ENST00000586900	DCAF4L1	Q3SXM0	396 aa		13.52	□□□□□ -0.25
PKN1-208	ENST00000586900	RAD9A	Q99638	391 aa		13.52	□□□□□ -0.25
PKN1-208	ENST00000586900	GTPBP4	Q9BZE4	634 aa	Known RBP	13.52	□□□□□ -0.25
PKN1-208	ENST00000586900	TRIM6	Q9C030	488 aa	Predicted RBP	13.52	□□□□□ -0.25
PKN1-208	ENST00000586900	RMND1	Q9NWS8	449 aa		13.52	□□□□□ -0.25
PKN1-208	ENST00000586900	LRFN2	Q9ULH4	789 aa		13.52	□□□□□ -0.25
PKN1-208	ENST00000586900	PCDHB2	Q9Y5E7	798 aa		13.52	□□□□□ -0.25
PKN1-208	ENST00000586900	UBE4B	O95155	1302 aa		13.52	□□□□□ -0.25
PKN1-208	ENST00000586900	ABLIM1	O14639	778 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	DGKI	O75912	1065 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	MBD3	O95983	291 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	MYB	P10242	640 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	MCF2	P10911	925 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	ATF7	P17544	494 aa	Predicted RBP	13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	LIG4	P49917	911 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	CASP5	P51878	434 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	MCL1	Q07820	350 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	RAB30	Q15771	203 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	BMT2	Q1RMZ1	405 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	EEF1DP3	Q658K8	133 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	MPZL3	Q6UWV2	235 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	HACE1	Q8IYU2	909 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	SMG8	Q8ND04	991 aa	Known RBP	13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	HPS3	Q969F9	1004 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	SMARCE1	Q969G3	411 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	ZNF689	Q96CS4	500 aa	Predicted RBP	13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	ZBED2	Q9BTP6	218 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	EIF2A	Q9BY44	585 aa	Known RBP	13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	FGFBP2	Q9BYJ0	223 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	SLC39A2	Q9NP94	309 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	UBN1	Q9NPG3	1134 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	USP20	Q9Y2K6	914 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	IPP	Q9Y573	584 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	INSL6	Q9Y581	213 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	PCDHA5	Q9Y5H7	936 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	PCDHA11	Q9Y5I1	949 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	STYXL1	Q9Y6J8	313 aa		13.51	□□□□□ -0.25
PKN1-208	ENST00000586900	COL4A6	Q14031	1691 aa		13.5	□□□□□ -0.25
PKN1-208	ENST00000586900	ZMYM2	Q9UBW7	1377 aa		13.5	□□□□□ -0.25
PKN1-208	ENST00000586900	HNRNPDL	O14979	420 aa	Known RBP	13.5	□□□□□ -0.25
PKN1-208	ENST00000586900	CLDN3	O15551	220 aa		13.5	□□□□□ -0.25
PKN1-208	ENST00000586900	TLL1	O43897	1013 aa		13.5	□□□□□ -0.25
PKN1-208	ENST00000586900	PRPF6	O94906	941 aa	Known RBP	13.5	□□□□□ -0.25
PKN1-208	ENST00000586900	UPP2	O95045	317 aa		13.5	□□□□□ -0.25
PKN1-208	ENST00000586900	KIF20A	O95235	890 aa		13.5	□□□□□ -0.25
PKN1-208	ENST00000586900	NPTXR	O95502	500 aa		13.5	□□□□□ -0.25
PKN1-208	ENST00000586900	PTMS	P20962	102 aa		13.5	□□□□□ -0.25
PKN1-208	ENST00000586900	SNRPF	P62306	86 aa	Known RBP	13.5	□□□□□ -0.25
PKN1-208	ENST00000586900	STK4	Q13043	487 aa		13.5	□□□□□ -0.25
PKN1-208	ENST00000586900	ZNF568	Q3ZCX4	644 aa		13.5	□□□□□ -0.25
PKN1-208	ENST00000586900	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.5	□□□□□ -0.25
PKN1-208	ENST00000586900	SLFN12L	Q6IEE8	588 aa		13.5	□□□□□ -0.25
PKN1-208	ENST00000586900	CDR2L	Q86X02	465 aa	Predicted RBP	13.5	□□□□□ -0.25
PKN1-208	ENST00000586900	SP7	Q8TDD2	431 aa	Predicted RBP	13.5	□□□□□ -0.25
PKN1-208	ENST00000586900	SCFD1	Q8WVM8	642 aa		13.5	□□□□□ -0.25
PKN1-208	ENST00000586900	BICD1	Q96G01	975 aa		13.5	□□□□□ -0.25
PKN1-208	ENST00000586900	TCHP	Q9BT92	498 aa		13.5	□□□□□ -0.25
PKN1-208	ENST00000586900	CDT1	Q9H211	546 aa		13.5	□□□□□ -0.25
PKN1-208	ENST00000586900	RC3H2	Q9HBD1	1191 aa	Known RBP	13.5	□□□□□ -0.25
PKN1-208	ENST00000586900	GIT1	Q9Y2X7	761 aa		13.5	□□□□□ -0.25
PKN1-208	ENST00000586900	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.49	□□□□□ -0.25
PKN1-208	ENST00000586900	GBF1	Q92538	1859 aa		13.49	□□□□□ -0.25
PKN1-208	ENST00000586900	GRXCR1	A8MXD5	290 aa		13.49	□□□□□ -0.25
PKN1-208	ENST00000586900	INPPL1	O15357	1258 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms