RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 RHOBTB2Q9BYZ6 727 aa11.34□□□□□ -0.59
NPLOC4-220ENST00000576940 VPS54Q9P1Q0 977 aa11.34□□□□□ -0.59
NPLOC4-220ENST00000576940 SSX2IPQ9Y2D8 614 aa11.34□□□□□ -0.59
NPLOC4-220ENST00000576940 MTF2Q9Y483 593 aaPredicted RBP11.34□□□□□ -0.59
NPLOC4-220ENST00000576940 DOCK8Q8NF50 2099 aa11.34□□□□□ -0.59
NPLOC4-220ENST00000576940 CACNA1BQ00975 2339 aa11.34□□□□□ -0.59
NPLOC4-220ENST00000576940 GPR179Q6PRD1 2367 aa11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 ANHXE9PGG2 379 aa11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 TDP2O95551 362 aa11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 ITGA4P13612 1032 aa11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 RPL17P18621 184 aaKnown RBP11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 NCLP19338 710 aaKnown RBP11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 GLUD2P49448 558 aa11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 ATXN1P54253 815 aaKnown RBP11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 STARD6P59095 220 aa11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 DSG1Q02413 1049 aa11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 HTR4Q13639 388 aa11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 PARM1Q6UWI2 310 aa11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 Q6ZUG5 572 aa11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 PJA1Q8NG27 643 aa11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 RDM1Q8NG50 284 aa11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 TBCKQ8TEA7 893 aa11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 PRPF31Q8WWY3 499 aaKnown RBP11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 FGF14Q92915 247 aa11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 GAD1Q99259 594 aa11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 EIF2AQ9BY44 585 aaKnown RBP11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 GPR62Q9BZJ7 368 aa11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 PRKD2Q9BZL6 878 aa11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 SLC2A4RGQ9NR83 387 aa11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 CHST7Q9NS84 486 aa11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 BMP2KQ9NSY1 1161 aaPredicted RBP11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 DPP7Q9UHL4 492 aa11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 HES2Q9Y543 173 aa11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 COL4A3BPQ9Y5P4 624 aa11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 DOCK6Q96HP0 2047 aa11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 CNTNAP2Q9UHC6 1331 aa11.33□□□□□ -0.6
NPLOC4-220ENST00000576940 FANCMQ8IYD8 2048 aa11.32□□□□□ -0.6
NPLOC4-220ENST00000576940 CCDC196A0A1B0GTZ2 297 aa11.32□□□□□ -0.6
NPLOC4-220ENST00000576940 ARL5CA6NH57 179 aa11.32□□□□□ -0.6
NPLOC4-220ENST00000576940 EML1O00423 815 aa11.32□□□□□ -0.6
NPLOC4-220ENST00000576940 KINO60870 393 aaKnown RBP11.32□□□□□ -0.6
NPLOC4-220ENST00000576940 SCNN1GP51170 649 aa11.32□□□□□ -0.6
NPLOC4-220ENST00000576940 NTHL1P78549 312 aa11.32□□□□□ -0.6
NPLOC4-220ENST00000576940 FGD1P98174 961 aa11.32□□□□□ -0.6
NPLOC4-220ENST00000576940 AKAP17AQ02040 695 aaKnown RBP11.32□□□□□ -0.6
NPLOC4-220ENST00000576940 TSGA10IPQ3SY00 556 aa11.32□□□□□ -0.6
NPLOC4-220ENST00000576940 Q4G0T1 1027 aa11.32□□□□□ -0.6
NPLOC4-220ENST00000576940 VARS2Q5ST30 1063 aaKnown RBP11.32□□□□□ -0.6
NPLOC4-220ENST00000576940 LILRA6Q6PI73 481 aa11.32□□□□□ -0.6
NPLOC4-220ENST00000576940 SRGAP1Q7Z6B7 1085 aa11.32□□□□□ -0.6
NPLOC4-220ENST00000576940 BICD2Q8TD16 824 aa11.32□□□□□ -0.6
NPLOC4-220ENST00000576940 HDAC7Q8WUI4 952 aa11.32□□□□□ -0.6
NPLOC4-220ENST00000576940 RABGGTAQ92696 567 aa11.32□□□□□ -0.6
NPLOC4-220ENST00000576940 ZFP42Q96MM3 310 aa11.32□□□□□ -0.6
NPLOC4-220ENST00000576940 PLEKHA4Q9H4M7 779 aa11.32□□□□□ -0.6
NPLOC4-220ENST00000576940 SPATA6Q9NWH7 488 aaPredicted RBP11.32□□□□□ -0.6
NPLOC4-220ENST00000576940 IPPQ9Y573 584 aa11.32□□□□□ -0.6
NPLOC4-220ENST00000576940 COL4A3Q01955 1670 aa11.32□□□□□ -0.6
NPLOC4-220ENST00000576940 SPTBN2O15020 2390 aa11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 TPRP12270 2363 aaKnown RBP11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 PAPLNO95428 1278 aa11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 CD72P21854 359 aa11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 FSHRP23945 695 aa11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 MLH1P40692 756 aa11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 RCAN1P53805 252 aa11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 NLRP5P59047 1200 aa11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 PSMC5P62195 406 aa11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 CSTF1Q05048 431 aaKnown RBP11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 DSC1Q08554 894 aa11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 LAMTOR4Q0VGL1 99 aa11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 NTRK3Q16288 839 aa11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 SLC44A4Q53GD3 710 aa11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 ELMSAN1Q6PJG2 1045 aa11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 GRASPQ7Z6J2 395 aaPredicted RBP11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 BRF1Q92994 677 aa11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 CPB2Q96IY4 423 aa11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 CEP170P1Q96L14 293 aa11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 YTHDC1Q96MU7 727 aaKnown RBP11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 JPH2Q9BR39 696 aaPredicted RBP11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 COLEC11Q9BWP8 271 aa11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 APOL6Q9BWW8 343 aa11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 SLC26A6Q9BXS9 759 aa11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 UBN1Q9NPG3 1134 aa11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 WRAP73Q9P2S5 460 aaPredicted RBP11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 NCDNQ9UBB6 729 aa11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 MTCL1Q9Y4B5 1905 aaKnown RBP11.31□□□□□ -0.6
NPLOC4-220ENST00000576940 CYP3A7-CYP3A51PA0A087WV96 503 aa11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 KANSL1LA0AUZ9 987 aa11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 FAM170BA6NMN3 283 aa11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 ZBTB39O15060 712 aa11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 LAMTOR5O43504 91 aa11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 ZMYND10O75800 440 aa11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 CYP3A7P24462 503 aa11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 IRX6P78412 446 aaPredicted RBP11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 UBXN2BQ14CS0 331 aa11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 USP41Q3LFD5 358 aa11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 FUT10Q6P4F1 479 aa11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 TSSK4Q6SA08 328 aa11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 PRSS55Q6UWB4 352 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms