RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 GCNT3O95395 438 aa17.96■□□□□ 0.47
USB1-206ENST00000562534 RPN1P04843 607 aaKnown RBP17.96■□□□□ 0.47
USB1-206ENST00000562534 EHHADHQ08426 723 aa17.96■□□□□ 0.47
USB1-206ENST00000562534 ZC2HC1CQ53FD0 456 aaPredicted RBP17.96■□□□□ 0.47
USB1-206ENST00000562534 FAM26FQ5R3K3 315 aa17.96■□□□□ 0.47
USB1-206ENST00000562534 UBXN11Q5T124 520 aa17.96■□□□□ 0.47
USB1-206ENST00000562534 MRPL10Q7Z7H8 261 aaKnown RBP17.96■□□□□ 0.47
USB1-206ENST00000562534 HACE1Q8IYU2 909 aa17.96■□□□□ 0.47
USB1-206ENST00000562534 TCHPQ9BT92 498 aa17.96■□□□□ 0.47
USB1-206ENST00000562534 TARS2Q9BW92 718 aaKnown RBP17.96■□□□□ 0.47
USB1-206ENST00000562534 EXOC1Q9NV70 894 aa17.96■□□□□ 0.47
USB1-206ENST00000562534 MSRAQ9UJ68 235 aa17.96■□□□□ 0.47
USB1-206ENST00000562534 PCDHA11Q9Y5I1 949 aa17.96■□□□□ 0.47
USB1-206ENST00000562534 MYH11P35749 1972 aa17.95■□□□□ 0.46
USB1-206ENST00000562534 RBAK-RBAKDNI3L0D1 243 aa17.95■□□□□ 0.46
USB1-206ENST00000562534 HOXA2O43364 376 aa17.95■□□□□ 0.46
USB1-206ENST00000562534 TLL1O43897 1013 aa17.95■□□□□ 0.46
USB1-206ENST00000562534 TOM1L1O75674 476 aa17.95■□□□□ 0.46
USB1-206ENST00000562534 KCNB1Q14721 858 aa17.95■□□□□ 0.46
USB1-206ENST00000562534 KMT5BQ4FZB7 885 aa17.95■□□□□ 0.46
USB1-206ENST00000562534 RSPH1Q8WYR4 309 aa17.95■□□□□ 0.46
USB1-206ENST00000562534 BICD1Q96G01 975 aa17.95■□□□□ 0.46
USB1-206ENST00000562534 GSDMAQ96QA5 445 aa17.95■□□□□ 0.46
USB1-206ENST00000562534 ACCSQ96QU6 501 aa17.95■□□□□ 0.46
USB1-206ENST00000562534 PDZD7Q9H5P4 517 aa17.95■□□□□ 0.46
USB1-206ENST00000562534 TMEM206Q9H813 350 aa17.95■□□□□ 0.46
USB1-206ENST00000562534 PTPRHQ9HD43 1115 aa17.95■□□□□ 0.46
USB1-206ENST00000562534 UBN1Q9NPG3 1134 aa17.95■□□□□ 0.46
USB1-206ENST00000562534 TTLL13PA6NNM8 815 aa17.94■□□□□ 0.46
USB1-206ENST00000562534 GRXCR1A8MXD5 290 aa17.94■□□□□ 0.46
USB1-206ENST00000562534 CLDN3O15551 220 aa17.94■□□□□ 0.46
USB1-206ENST00000562534 PPP1R37O75864 691 aa17.94■□□□□ 0.46
USB1-206ENST00000562534 DGKIO75912 1065 aa17.94■□□□□ 0.46
USB1-206ENST00000562534 PIGRP01833 764 aa17.94■□□□□ 0.46
USB1-206ENST00000562534 LIG4P49917 911 aa17.94■□□□□ 0.46
USB1-206ENST00000562534 HTRA4P83105 476 aaPredicted RBP17.94■□□□□ 0.46
USB1-206ENST00000562534 RAB30Q15771 203 aa17.94■□□□□ 0.46
USB1-206ENST00000562534 DCAF4L1Q3SXM0 396 aa17.94■□□□□ 0.46
USB1-206ENST00000562534 L1TD1Q5T7N2 865 aaKnown RBP17.94■□□□□ 0.46
USB1-206ENST00000562534 SLFN12LQ6IEE8 588 aa17.94■□□□□ 0.46
USB1-206ENST00000562534 FAM117BQ6P1L5 589 aa17.94■□□□□ 0.46
USB1-206ENST00000562534 ZNF598Q86UK7 904 aaKnown RBP17.94■□□□□ 0.46
USB1-206ENST00000562534 MAP4K3Q8IVH8 894 aa17.94■□□□□ 0.46
USB1-206ENST00000562534 ZNF507Q8TCN5 953 aa17.94■□□□□ 0.46
USB1-206ENST00000562534 GTPBP4Q9BZE4 634 aaKnown RBP17.94■□□□□ 0.46
USB1-206ENST00000562534 RMND1Q9NWS8 449 aa17.94■□□□□ 0.46
USB1-206ENST00000562534 USP20Q9Y2K6 914 aa17.94■□□□□ 0.46
USB1-206ENST00000562534 EIF3DO15371 548 aaKnown RBP eCLIP17.93■□□□□ 0.46
USB1-206ENST00000562534 RHOBTB3O94955 611 aa17.93■□□□□ 0.46
USB1-206ENST00000562534 NPTXRO95502 500 aa17.93■□□□□ 0.46
USB1-206ENST00000562534 EDN1P05305 212 aa17.93■□□□□ 0.46
USB1-206ENST00000562534 PRR29P0C7W0 189 aa17.93■□□□□ 0.46
USB1-206ENST00000562534 ITGA4P13612 1032 aa17.93■□□□□ 0.46
USB1-206ENST00000562534 IBSPP21815 317 aaPredicted RBP17.93■□□□□ 0.46
USB1-206ENST00000562534 PNOCQ13519 176 aa17.93■□□□□ 0.46
USB1-206ENST00000562534 HABP4Q5JVS0 413 aaKnown RBP17.93■□□□□ 0.46
USB1-206ENST00000562534 FAM109BQ6ICB4 259 aaPredicted RBP17.93■□□□□ 0.46
USB1-206ENST00000562534 MPZL3Q6UWV2 235 aa17.93■□□□□ 0.46
USB1-206ENST00000562534 TMCO2Q7Z6W1 182 aaPredicted RBP17.93■□□□□ 0.46
USB1-206ENST00000562534 CDR2LQ86X02 465 aaPredicted RBP17.93■□□□□ 0.46
USB1-206ENST00000562534 SYCP3Q8IZU3 236 aa17.93■□□□□ 0.46
USB1-206ENST00000562534 RNF169Q8NCN4 708 aa17.93■□□□□ 0.46
USB1-206ENST00000562534 HPS3Q969F9 1004 aa17.93■□□□□ 0.46
USB1-206ENST00000562534 ZNF689Q96CS4 500 aaPredicted RBP17.93■□□□□ 0.46
USB1-206ENST00000562534 YME1L1Q96TA2 773 aa17.93■□□□□ 0.46
USB1-206ENST00000562534 EIF2AQ9BY44 585 aaKnown RBP17.93■□□□□ 0.46
USB1-206ENST00000562534 SLC39A2Q9NP94 309 aa17.93■□□□□ 0.46
USB1-206ENST00000562534 IPPQ9Y573 584 aa17.93■□□□□ 0.46
USB1-206ENST00000562534 TTC3P53804 2025 aa17.93■□□□□ 0.46
USB1-206ENST00000562534 MICAL3Q7RTP6 2002 aa17.93■□□□□ 0.46
USB1-206ENST00000562534 HNRNPDLO14979 420 aaKnown RBP17.92■□□□□ 0.46
USB1-206ENST00000562534 KIF20AO95235 890 aa17.92■□□□□ 0.46
USB1-206ENST00000562534 MYBP10242 640 aa17.92■□□□□ 0.46
USB1-206ENST00000562534 MCF2P10911 925 aa17.92■□□□□ 0.46
USB1-206ENST00000562534 PROZP22891 400 aa17.92■□□□□ 0.46
USB1-206ENST00000562534 RABGGTBP53611 331 aa17.92■□□□□ 0.46
USB1-206ENST00000562534 EEF1DP3Q658K8 133 aa17.92■□□□□ 0.46
USB1-206ENST00000562534 EPM2AIP1Q7L775 607 aaPredicted RBP17.92■□□□□ 0.46
USB1-206ENST00000562534 ABI1Q8IZP0 508 aa17.92■□□□□ 0.46
USB1-206ENST00000562534 SMG8Q8ND04 991 aaKnown RBP17.92■□□□□ 0.46
USB1-206ENST00000562534 SPATA20Q8TB22 786 aa17.92■□□□□ 0.46
USB1-206ENST00000562534 SMARCE1Q969G3 411 aa17.92■□□□□ 0.46
USB1-206ENST00000562534 PBX4Q9BYU1 374 aa17.92■□□□□ 0.46
USB1-206ENST00000562534 PCDHA5Q9Y5H7 936 aa17.92■□□□□ 0.46
USB1-206ENST00000562534 PRPF6O94906 941 aaKnown RBP17.91■□□□□ 0.46
USB1-206ENST00000562534 ATF7P17544 494 aaPredicted RBP17.91■□□□□ 0.46
USB1-206ENST00000562534 MCM4P33991 863 aa17.91■□□□□ 0.46
USB1-206ENST00000562534 MATR3P43243 847 aaKnown RBP eCLIP17.91■□□□□ 0.46
USB1-206ENST00000562534 CASP5P51878 434 aa17.91■□□□□ 0.46
USB1-206ENST00000562534 MCL1Q07820 350 aa17.91■□□□□ 0.46
USB1-206ENST00000562534 STK4Q13043 487 aa17.91■□□□□ 0.46
USB1-206ENST00000562534 KYAT1Q16773 422 aa17.91■□□□□ 0.46
USB1-206ENST00000562534 ZNF568Q3ZCX4 644 aa17.91■□□□□ 0.46
USB1-206ENST00000562534 ZBTB45Q96K62 511 aaPredicted RBP17.91■□□□□ 0.46
USB1-206ENST00000562534 TMEM117Q9H0C3 514 aa17.91■□□□□ 0.46
USB1-206ENST00000562534 KANSL3Q9P2N6 904 aa17.91■□□□□ 0.46
USB1-206ENST00000562534 GIT1Q9Y2X7 761 aa17.91■□□□□ 0.46
USB1-206ENST00000562534 STYXL1Q9Y6J8 313 aa17.91■□□□□ 0.46
USB1-206ENST00000562534 SNRPFP62306 86 aaKnown RBP17.9■□□□□ 0.46
USB1-206ENST00000562534 KCNA1Q09470 495 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms