RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 SMARCE1Q969G3 411 aa19.22■□□□□ 0.67
PSEN1-218ENST00000556864 ACCSQ96QU6 501 aa19.22■□□□□ 0.67
PSEN1-218ENST00000556864 FAM105AQ9NUU6 356 aa19.22■□□□□ 0.67
PSEN1-218ENST00000556864 TMEM161AQ9NX61 479 aa19.22■□□□□ 0.67
PSEN1-218ENST00000556864 COL4A6Q14031 1691 aa19.21■□□□□ 0.67
PSEN1-218ENST00000556864 A0A0U1RQF3 1178 aa19.21■□□□□ 0.67
PSEN1-218ENST00000556864 A0A1B0GUA9 196 aa19.21■□□□□ 0.67
PSEN1-218ENST00000556864 TOM1L1O75674 476 aa19.21■□□□□ 0.67
PSEN1-218ENST00000556864 RHOBTB3O94955 611 aa19.21■□□□□ 0.67
PSEN1-218ENST00000556864 KIF20AO95235 890 aa19.21■□□□□ 0.67
PSEN1-218ENST00000556864 MYBP10242 640 aa19.21■□□□□ 0.67
PSEN1-218ENST00000556864 IBSPP21815 317 aaPredicted RBP19.21■□□□□ 0.67
PSEN1-218ENST00000556864 MCM4P33991 863 aa19.21■□□□□ 0.67
PSEN1-218ENST00000556864 ZNF568Q3ZCX4 644 aa19.21■□□□□ 0.67
PSEN1-218ENST00000556864 NT5DC1Q5TFE4 455 aa19.21■□□□□ 0.67
PSEN1-218ENST00000556864 ECHDC2Q86YB7 292 aa19.21■□□□□ 0.67
PSEN1-218ENST00000556864 RSPH1Q8WYR4 309 aa19.21■□□□□ 0.67
PSEN1-218ENST00000556864 PGBD4Q96DM1 585 aa19.21■□□□□ 0.67
PSEN1-218ENST00000556864 GSDMAQ96QA5 445 aa19.21■□□□□ 0.67
PSEN1-218ENST00000556864 TARS2Q9BW92 718 aaKnown RBP19.21■□□□□ 0.67
PSEN1-218ENST00000556864 TMEM206Q9H813 350 aa19.21■□□□□ 0.67
PSEN1-218ENST00000556864 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.2■□□□□ 0.66
PSEN1-218ENST00000556864 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.2■□□□□ 0.66
PSEN1-218ENST00000556864 NPTXRO95502 500 aa19.2■□□□□ 0.66
PSEN1-218ENST00000556864 EOMESO95936 686 aa19.2■□□□□ 0.66
PSEN1-218ENST00000556864 EDN1P05305 212 aa19.2■□□□□ 0.66
PSEN1-218ENST00000556864 CASP5P51878 434 aa19.2■□□□□ 0.66
PSEN1-218ENST00000556864 FAM189BP81408 668 aa19.2■□□□□ 0.66
PSEN1-218ENST00000556864 ZC2HC1CQ53FD0 456 aaPredicted RBP19.2■□□□□ 0.66
PSEN1-218ENST00000556864 UBXN11Q5T124 520 aa19.2■□□□□ 0.66
PSEN1-218ENST00000556864 MPZL3Q6UWV2 235 aa19.2■□□□□ 0.66
PSEN1-218ENST00000556864 RTN4RL1Q86UN2 441 aaPredicted RBP19.2■□□□□ 0.66
PSEN1-218ENST00000556864 SYCP3Q8IZU3 236 aa19.2■□□□□ 0.66
PSEN1-218ENST00000556864 RNF169Q8NCN4 708 aa19.2■□□□□ 0.66
PSEN1-218ENST00000556864 ACO2Q99798 780 aaKnown RBP19.2■□□□□ 0.66
PSEN1-218ENST00000556864 ZBED2Q9BTP6 218 aa19.2■□□□□ 0.66
PSEN1-218ENST00000556864 STRA6Q9BX79 667 aa19.2■□□□□ 0.66
PSEN1-218ENST00000556864 NUP62CLQ9H1M0 184 aa19.2■□□□□ 0.66
PSEN1-218ENST00000556864 CLSTN2Q9H4D0 955 aa19.2■□□□□ 0.66
PSEN1-218ENST00000556864 ANKFY1Q9P2R3 1169 aa19.2■□□□□ 0.66
PSEN1-218ENST00000556864 PCDHB7Q9Y5E2 793 aa19.2■□□□□ 0.66
PSEN1-218ENST00000556864 PCDHB2Q9Y5E7 798 aa19.2■□□□□ 0.66
PSEN1-218ENST00000556864 ZMYM2Q9UBW7 1377 aa19.19■□□□□ 0.66
PSEN1-218ENST00000556864 TET1Q8NFU7 2136 aa19.19■□□□□ 0.66
PSEN1-218ENST00000556864 ZNF623O75123 536 aa19.19■□□□□ 0.66
PSEN1-218ENST00000556864 GJB5O95377 273 aa19.19■□□□□ 0.66
PSEN1-218ENST00000556864 MCF2P10911 925 aa19.19■□□□□ 0.66
PSEN1-218ENST00000556864 MATR3P43243 847 aaKnown RBP eCLIP19.19■□□□□ 0.66
PSEN1-218ENST00000556864 NOLC1Q14978 699 aaKnown RBP eCLIP19.19■□□□□ 0.66
PSEN1-218ENST00000556864 RAB30Q15771 203 aa19.19■□□□□ 0.66
PSEN1-218ENST00000556864 EEF1DP3Q658K8 133 aa19.19■□□□□ 0.66
PSEN1-218ENST00000556864 ABI1Q8IZP0 508 aa19.19■□□□□ 0.66
PSEN1-218ENST00000556864 HPS3Q969F9 1004 aa19.19■□□□□ 0.66
PSEN1-218ENST00000556864 TOP1MTQ969P6 601 aa19.19■□□□□ 0.66
PSEN1-218ENST00000556864 TCHPQ9BT92 498 aa19.19■□□□□ 0.66
PSEN1-218ENST00000556864 FGFBP2Q9BYJ0 223 aa19.19■□□□□ 0.66
PSEN1-218ENST00000556864 SLC39A2Q9NP94 309 aa19.19■□□□□ 0.66
PSEN1-218ENST00000556864 TTLL13PA6NNM8 815 aa19.18■□□□□ 0.66
PSEN1-218ENST00000556864 UPP2O95045 317 aa19.18■□□□□ 0.66
PSEN1-218ENST00000556864 BMT2Q1RMZ1 405 aa19.18■□□□□ 0.66
PSEN1-218ENST00000556864 LRIT3Q3SXY7 679 aa19.18■□□□□ 0.66
PSEN1-218ENST00000556864 SLFN12LQ6IEE8 588 aa19.18■□□□□ 0.66
PSEN1-218ENST00000556864 FAM117BQ6P1L5 589 aa19.18■□□□□ 0.66
PSEN1-218ENST00000556864 EPM2AIP1Q7L775 607 aaPredicted RBP19.18■□□□□ 0.66
PSEN1-218ENST00000556864 CDR2LQ86X02 465 aaPredicted RBP19.18■□□□□ 0.66
PSEN1-218ENST00000556864 YME1L1Q96TA2 773 aa19.18■□□□□ 0.66
PSEN1-218ENST00000556864 EIF2AQ9BY44 585 aaKnown RBP19.18■□□□□ 0.66
PSEN1-218ENST00000556864 CDT1Q9H211 546 aa19.18■□□□□ 0.66
PSEN1-218ENST00000556864 UBN1Q9NPG3 1134 aa19.18■□□□□ 0.66
PSEN1-218ENST00000556864 IPPQ9Y573 584 aa19.18■□□□□ 0.66
PSEN1-218ENST00000556864 PCDHA5Q9Y5H7 936 aa19.18■□□□□ 0.66
PSEN1-218ENST00000556864 CLDN3O15551 220 aa19.17■□□□□ 0.66
PSEN1-218ENST00000556864 TLL1O43897 1013 aa19.17■□□□□ 0.66
PSEN1-218ENST00000556864 PRPF6O94906 941 aaKnown RBP19.17■□□□□ 0.66
PSEN1-218ENST00000556864 HARSP12081 509 aaKnown RBP19.17■□□□□ 0.66
PSEN1-218ENST00000556864 ITGA4P13612 1032 aa19.17■□□□□ 0.66
PSEN1-218ENST00000556864 PROZP22891 400 aa19.17■□□□□ 0.66
PSEN1-218ENST00000556864 SMAD3P84022 425 aaKnown RBP19.17■□□□□ 0.66
PSEN1-218ENST00000556864 KYAT1Q16773 422 aa19.17■□□□□ 0.66
PSEN1-218ENST00000556864 GLB1LQ6UWU2 654 aa19.17■□□□□ 0.66
PSEN1-218ENST00000556864 ZNF598Q86UK7 904 aaKnown RBP19.17■□□□□ 0.66
PSEN1-218ENST00000556864 KIAA0895Q8NCT3 520 aa19.17■□□□□ 0.66
PSEN1-218ENST00000556864 SPATA20Q8TB22 786 aa19.17■□□□□ 0.66
PSEN1-218ENST00000556864 CCDC94Q9BW85 323 aaPredicted RBP19.17■□□□□ 0.66
PSEN1-218ENST00000556864 NXF3Q9H4D5 531 aaKnown RBP19.17■□□□□ 0.66
PSEN1-218ENST00000556864 MSRAQ9UJ68 235 aa19.17■□□□□ 0.66
PSEN1-218ENST00000556864 USP20Q9Y2K6 914 aa19.17■□□□□ 0.66
PSEN1-218ENST00000556864 INSL6Q9Y581 213 aa19.17■□□□□ 0.66
PSEN1-218ENST00000556864 PCDHA11Q9Y5I1 949 aa19.17■□□□□ 0.66
PSEN1-218ENST00000556864 ATF7P17544 494 aaPredicted RBP19.16■□□□□ 0.66
PSEN1-218ENST00000556864 MCL1Q07820 350 aa19.16■□□□□ 0.66
PSEN1-218ENST00000556864 HSP90AA2PQ14568 343 aaPredicted RBP19.16■□□□□ 0.66
PSEN1-218ENST00000556864 HS2ST1Q7LGA3 356 aa19.16■□□□□ 0.66
PSEN1-218ENST00000556864 MRPL10Q7Z7H8 261 aaKnown RBP19.16■□□□□ 0.66
PSEN1-218ENST00000556864 ZBTB33Q86T24 672 aa19.16■□□□□ 0.66
PSEN1-218ENST00000556864 GOLGA5Q8TBA6 731 aa19.16■□□□□ 0.66
PSEN1-218ENST00000556864 ZNF507Q8TCN5 953 aa19.16■□□□□ 0.66
PSEN1-218ENST00000556864 GPT2Q8TD30 523 aa19.16■□□□□ 0.66
PSEN1-218ENST00000556864 SCFD1Q8WVM8 642 aa19.16■□□□□ 0.66
PSEN1-218ENST00000556864 RAD9AQ99638 391 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms