RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 ASIC1P78348 528 aa18.47■□□□□ 0.55
CCDC38-203ENST00000546803 GTF2BQ00403 316 aa18.47■□□□□ 0.55
CCDC38-203ENST00000546803 TPRNQ4KMQ1 711 aa18.47■□□□□ 0.55
CCDC38-203ENST00000546803 ZPBP2Q6X784 338 aa18.47■□□□□ 0.55
CCDC38-203ENST00000546803 ZNF720Q7Z2F6 126 aa18.47■□□□□ 0.55
CCDC38-203ENST00000546803 TMEM87AQ8NBN3 555 aa18.47■□□□□ 0.55
CCDC38-203ENST00000546803 HVCN1Q96D96 273 aa18.47■□□□□ 0.55
CCDC38-203ENST00000546803 PAGE5Q96GU1 130 aa18.47■□□□□ 0.55
CCDC38-203ENST00000546803 SAMD11Q96NU1 681 aa18.47■□□□□ 0.55
CCDC38-203ENST00000546803 ACO2Q99798 780 aaKnown RBP18.47■□□□□ 0.55
CCDC38-203ENST00000546803 EIF2AQ9BY44 585 aaKnown RBP18.47■□□□□ 0.55
CCDC38-203ENST00000546803 SEMA6BQ9H3T3 888 aa18.47■□□□□ 0.55
CCDC38-203ENST00000546803 GOLPH3LQ9H4A5 285 aa18.47■□□□□ 0.55
CCDC38-203ENST00000546803 PDZD7Q9H5P4 517 aa18.47■□□□□ 0.55
CCDC38-203ENST00000546803 UBN1Q9NPG3 1134 aa18.47■□□□□ 0.55
CCDC38-203ENST00000546803 RNF19AQ9NV58 838 aa18.47■□□□□ 0.55
CCDC38-203ENST00000546803 IPPQ9Y573 584 aa18.47■□□□□ 0.55
CCDC38-203ENST00000546803 MICAL3Q7RTP6 2002 aa18.46■□□□□ 0.55
CCDC38-203ENST00000546803 PVALEFA0A1B0GWK0 134 aa18.46■□□□□ 0.55
CCDC38-203ENST00000546803 TBKBP1A7MCY6 615 aa18.46■□□□□ 0.55
CCDC38-203ENST00000546803 NPTXRO95502 500 aa18.46■□□□□ 0.55
CCDC38-203ENST00000546803 EDN1P05305 212 aa18.46■□□□□ 0.55
CCDC38-203ENST00000546803 FGFR1P11362 822 aa18.46■□□□□ 0.55
CCDC38-203ENST00000546803 ALCAMQ13740 583 aa18.46■□□□□ 0.55
CCDC38-203ENST00000546803 DCAF4L1Q3SXM0 396 aa18.46■□□□□ 0.55
CCDC38-203ENST00000546803 GLB1LQ6UWU2 654 aa18.46■□□□□ 0.55
CCDC38-203ENST00000546803 CDR2LQ86X02 465 aaPredicted RBP18.46■□□□□ 0.55
CCDC38-203ENST00000546803 SMG8Q8ND04 991 aaKnown RBP18.46■□□□□ 0.55
CCDC38-203ENST00000546803 TGS1Q96RS0 853 aaKnown RBP18.46■□□□□ 0.55
CCDC38-203ENST00000546803 TARS2Q9BW92 718 aaKnown RBP18.46■□□□□ 0.55
CCDC38-203ENST00000546803 TTYH1Q9H313 450 aaPredicted RBP18.46■□□□□ 0.55
CCDC38-203ENST00000546803 MRPL44Q9H9J2 332 aaKnown RBP18.46■□□□□ 0.55
CCDC38-203ENST00000546803 TBX20Q9UMR3 447 aa18.46■□□□□ 0.55
CCDC38-203ENST00000546803 RWDD3Q9Y3V2 267 aa18.46■□□□□ 0.55
CCDC38-203ENST00000546803 RANBP2P49792 3224 aaKnown RBP18.45■□□□□ 0.54
CCDC38-203ENST00000546803 ARHGEF15O94989 841 aa18.45■□□□□ 0.54
CCDC38-203ENST00000546803 ITGA4P13612 1032 aa18.45■□□□□ 0.54
CCDC38-203ENST00000546803 NMT1P30419 496 aaKnown RBP18.45■□□□□ 0.54
CCDC38-203ENST00000546803 GATMP50440 423 aa18.45■□□□□ 0.54
CCDC38-203ENST00000546803 ERVK-21P61565 698 aa18.45■□□□□ 0.54
CCDC38-203ENST00000546803 COASYQ13057 564 aa18.45■□□□□ 0.54
CCDC38-203ENST00000546803 CLLU1OSQ5K130 101 aa18.45■□□□□ 0.54
CCDC38-203ENST00000546803 KANK3Q6NY19 840 aa18.45■□□□□ 0.54
CCDC38-203ENST00000546803 AGMOQ6ZNB7 445 aa18.45■□□□□ 0.54
CCDC38-203ENST00000546803 KRBA2Q6ZNG9 492 aa18.45■□□□□ 0.54
CCDC38-203ENST00000546803 CLEC17AQ6ZS10 378 aa18.45■□□□□ 0.54
CCDC38-203ENST00000546803 UNC13DQ70J99 1090 aa18.45■□□□□ 0.54
CCDC38-203ENST00000546803 DEFB123Q8N688 67 aa18.45■□□□□ 0.54
CCDC38-203ENST00000546803 CASD1Q96PB1 797 aa18.45■□□□□ 0.54
CCDC38-203ENST00000546803 MRPL9Q9BYD2 267 aaKnown RBP18.45■□□□□ 0.54
CCDC38-203ENST00000546803 RSAD1Q9HA92 442 aa18.45■□□□□ 0.54
CCDC38-203ENST00000546803 PTPRHQ9HD43 1115 aa18.45■□□□□ 0.54
CCDC38-203ENST00000546803 USP20Q9Y2K6 914 aa18.45■□□□□ 0.54
CCDC38-203ENST00000546803 PCDHB13Q9Y5F0 798 aa18.45■□□□□ 0.54
CCDC38-203ENST00000546803 TTC3P53804 2025 aa18.45■□□□□ 0.54
CCDC38-203ENST00000546803 COL4A6Q14031 1691 aa18.44■□□□□ 0.54
CCDC38-203ENST00000546803 GTPBP6O43824 516 aaPredicted RBP18.44■□□□□ 0.54
CCDC38-203ENST00000546803 TOM1L1O75674 476 aa18.44■□□□□ 0.54
CCDC38-203ENST00000546803 PPP1R37O75864 691 aa18.44■□□□□ 0.54
CCDC38-203ENST00000546803 PIGRP01833 764 aa18.44■□□□□ 0.54
CCDC38-203ENST00000546803 PROZP22891 400 aa18.44■□□□□ 0.54
CCDC38-203ENST00000546803 FAM160A1Q05DH4 1040 aa18.44■□□□□ 0.54
CCDC38-203ENST00000546803 CUL4BQ13620 913 aa18.44■□□□□ 0.54
CCDC38-203ENST00000546803 PAN2Q504Q3 1202 aaKnown RBP18.44■□□□□ 0.54
CCDC38-203ENST00000546803 EEF1DP3Q658K8 133 aa18.44■□□□□ 0.54
CCDC38-203ENST00000546803 MPZL3Q6UWV2 235 aa18.44■□□□□ 0.54
CCDC38-203ENST00000546803 STXBP4Q6ZWJ1 553 aa18.44■□□□□ 0.54
CCDC38-203ENST00000546803 MAP4K3Q8IVH8 894 aa18.44■□□□□ 0.54
CCDC38-203ENST00000546803 FMR1NBQ8N0W7 255 aaPredicted RBP18.44■□□□□ 0.54
CCDC38-203ENST00000546803 LRRC43Q8N309 656 aa18.44■□□□□ 0.54
CCDC38-203ENST00000546803 CLP1Q92989 425 aaKnown RBP18.44■□□□□ 0.54
CCDC38-203ENST00000546803 LPPQ93052 612 aa18.44■□□□□ 0.54
CCDC38-203ENST00000546803 BICD1Q96G01 975 aa18.44■□□□□ 0.54
CCDC38-203ENST00000546803 STRA6Q9BX79 667 aa18.44■□□□□ 0.54
CCDC38-203ENST00000546803 BLZF1Q9H2G9 400 aa18.44■□□□□ 0.54
CCDC38-203ENST00000546803 NXF3Q9H4D5 531 aaKnown RBP18.44■□□□□ 0.54
CCDC38-203ENST00000546803 GIT1Q9Y2X7 761 aa18.44■□□□□ 0.54
CCDC38-203ENST00000546803 ZMYM2Q9UBW7 1377 aa18.43■□□□□ 0.54
CCDC38-203ENST00000546803 OFD1O75665 1012 aa18.43■□□□□ 0.54
CCDC38-203ENST00000546803 GCNT3O95395 438 aa18.43■□□□□ 0.54
CCDC38-203ENST00000546803 MCF2P10911 925 aa18.43■□□□□ 0.54
CCDC38-203ENST00000546803 ZNF568Q3ZCX4 644 aa18.43■□□□□ 0.54
CCDC38-203ENST00000546803 NOMO2Q5JPE7 1267 aa18.43■□□□□ 0.54
CCDC38-203ENST00000546803 GRAMD1CQ8IYS0 662 aa18.43■□□□□ 0.54
CCDC38-203ENST00000546803 ENGASEQ8NFI3 743 aa18.43■□□□□ 0.54
CCDC38-203ENST00000546803 URGCPQ8TCY9 931 aa18.43■□□□□ 0.54
CCDC38-203ENST00000546803 HELQQ8TDG4 1101 aa18.43■□□□□ 0.54
CCDC38-203ENST00000546803 TCHPQ9BT92 498 aa18.43■□□□□ 0.54
CCDC38-203ENST00000546803 TBC1D7Q9P0N9 293 aa18.43■□□□□ 0.54
CCDC38-203ENST00000546803 KANSL3Q9P2N6 904 aa18.43■□□□□ 0.54
CCDC38-203ENST00000546803 EXOC7Q9UPT5 735 aa18.43■□□□□ 0.54
CCDC38-203ENST00000546803 HES2Q9Y543 173 aa18.43■□□□□ 0.54
CCDC38-203ENST00000546803 MRPL42Q9Y6G3 142 aaKnown RBP18.43■□□□□ 0.54
CCDC38-203ENST00000546803 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.42■□□□□ 0.54
CCDC38-203ENST00000546803 MEIS3P2A8K0S8 358 aa18.42■□□□□ 0.54
CCDC38-203ENST00000546803 HNRNPDLO14979 420 aaKnown RBP18.42■□□□□ 0.54
CCDC38-203ENST00000546803 INPPL1O15357 1258 aa18.42■□□□□ 0.54
CCDC38-203ENST00000546803 CLDN3O15551 220 aa18.42■□□□□ 0.54
CCDC38-203ENST00000546803 RB1P06400 928 aa18.42■□□□□ 0.54
CCDC38-203ENST00000546803 CASP1P29466 404 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms