RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 BICD1Q96G01 975 aa18.49■□□□□ 0.55
LTBR-215ENST00000546296 C7orf25Q9BPX7 421 aa18.49■□□□□ 0.55
LTBR-215ENST00000546296 TRIM9Q9C026 710 aa18.49■□□□□ 0.55
LTBR-215ENST00000546296 TTYH1Q9H313 450 aaPredicted RBP18.49■□□□□ 0.55
LTBR-215ENST00000546296 GOLPH3LQ9H4A5 285 aa18.49■□□□□ 0.55
LTBR-215ENST00000546296 PDZD7Q9H5P4 517 aa18.49■□□□□ 0.55
LTBR-215ENST00000546296 MRPL44Q9H9J2 332 aaKnown RBP18.49■□□□□ 0.55
LTBR-215ENST00000546296 CERS4Q9HA82 394 aa18.49■□□□□ 0.55
LTBR-215ENST00000546296 TBC1D7Q9P0N9 293 aa18.49■□□□□ 0.55
LTBR-215ENST00000546296 SEL1LQ9UBV2 794 aa18.49■□□□□ 0.55
LTBR-215ENST00000546296 ACTN4O43707 911 aaKnown RBP18.48■□□□□ 0.55
LTBR-215ENST00000546296 ARHGEF15O94989 841 aa18.48■□□□□ 0.55
LTBR-215ENST00000546296 ATF7P17544 494 aaPredicted RBP18.48■□□□□ 0.55
LTBR-215ENST00000546296 NMT1P30419 496 aaKnown RBP18.48■□□□□ 0.55
LTBR-215ENST00000546296 ABCD1P33897 745 aa18.48■□□□□ 0.55
LTBR-215ENST00000546296 SPOUT1Q5T280 376 aaKnown RBP18.48■□□□□ 0.55
LTBR-215ENST00000546296 GLB1LQ6UWU2 654 aa18.48■□□□□ 0.55
LTBR-215ENST00000546296 TAS1R3Q7RTX0 852 aa18.48■□□□□ 0.55
LTBR-215ENST00000546296 MRPL10Q7Z7H8 261 aaKnown RBP18.48■□□□□ 0.55
LTBR-215ENST00000546296 GRAMD1CQ8IYS0 662 aa18.48■□□□□ 0.55
LTBR-215ENST00000546296 HELQQ8TDG4 1101 aa18.48■□□□□ 0.55
LTBR-215ENST00000546296 ARNTL2Q8WYA1 636 aa18.48■□□□□ 0.55
LTBR-215ENST00000546296 PAGE5Q96GU1 130 aa18.48■□□□□ 0.55
LTBR-215ENST00000546296 TGS1Q96RS0 853 aaKnown RBP18.48■□□□□ 0.55
LTBR-215ENST00000546296 ACO2Q99798 780 aaKnown RBP18.48■□□□□ 0.55
LTBR-215ENST00000546296 TCHPQ9BT92 498 aa18.48■□□□□ 0.55
LTBR-215ENST00000546296 TARS2Q9BW92 718 aaKnown RBP18.48■□□□□ 0.55
LTBR-215ENST00000546296 APOL6Q9BWW8 343 aa18.48■□□□□ 0.55
LTBR-215ENST00000546296 TMEM117Q9H0C3 514 aa18.48■□□□□ 0.55
LTBR-215ENST00000546296 BLZF1Q9H2G9 400 aa18.48■□□□□ 0.55
LTBR-215ENST00000546296 MTUS1Q9ULD2 1270 aa18.48■□□□□ 0.55
LTBR-215ENST00000546296 IPPQ9Y573 584 aa18.48■□□□□ 0.55
LTBR-215ENST00000546296 EDN1P05305 212 aa18.47■□□□□ 0.55
LTBR-215ENST00000546296 SMG8Q8ND04 991 aaKnown RBP18.47■□□□□ 0.55
LTBR-215ENST00000546296 CASD1Q96PB1 797 aa18.47■□□□□ 0.55
LTBR-215ENST00000546296 RC3H2Q9HBD1 1191 aaKnown RBP18.47■□□□□ 0.55
LTBR-215ENST00000546296 UBN1Q9NPG3 1134 aa18.47■□□□□ 0.55
LTBR-215ENST00000546296 TBX20Q9UMR3 447 aa18.47■□□□□ 0.55
LTBR-215ENST00000546296 TNFSF13BQ9Y275 285 aa18.47■□□□□ 0.55
LTBR-215ENST00000546296 HES2Q9Y543 173 aa18.47■□□□□ 0.55
LTBR-215ENST00000546296 TTC3P53804 2025 aa18.47■□□□□ 0.55
LTBR-215ENST00000546296 ZNF202O95125 648 aa18.46■□□□□ 0.55
LTBR-215ENST00000546296 CASP1P29466 404 aa18.46■□□□□ 0.55
LTBR-215ENST00000546296 MATR3P43243 847 aaKnown RBP eCLIP18.46■□□□□ 0.55
LTBR-215ENST00000546296 GRIN2CQ14957 1233 aa18.46■□□□□ 0.55
LTBR-215ENST00000546296 DCAF4L1Q3SXM0 396 aa18.46■□□□□ 0.55
LTBR-215ENST00000546296 CLLU1OSQ5K130 101 aa18.46■□□□□ 0.55
LTBR-215ENST00000546296 EEF1DP3Q658K8 133 aa18.46■□□□□ 0.55
LTBR-215ENST00000546296 CNNM4Q6P4Q7 775 aa18.46■□□□□ 0.55
LTBR-215ENST00000546296 ZNF720Q7Z2F6 126 aa18.46■□□□□ 0.55
LTBR-215ENST00000546296 ZBTB33Q86T24 672 aa18.46■□□□□ 0.55
LTBR-215ENST00000546296 CCDC34Q96HJ3 373 aa18.46■□□□□ 0.55
LTBR-215ENST00000546296 C17orf80Q9BSJ5 609 aa18.46■□□□□ 0.55
LTBR-215ENST00000546296 RSAD1Q9HA92 442 aa18.46■□□□□ 0.55
LTBR-215ENST00000546296 RNF19AQ9NV58 838 aa18.46■□□□□ 0.55
LTBR-215ENST00000546296 PARP2Q9UGN5 583 aa18.46■□□□□ 0.55
LTBR-215ENST00000546296 INPP5FQ9Y2H2 1132 aa18.46■□□□□ 0.55
LTBR-215ENST00000546296 MRPL42Q9Y6G3 142 aaKnown RBP18.46■□□□□ 0.55
LTBR-215ENST00000546296 PTPRSQ13332 1948 aa18.45■□□□□ 0.54
LTBR-215ENST00000546296 FRMD3A2A2Y4 597 aa18.45■□□□□ 0.54
LTBR-215ENST00000546296 MEIS3P2A8K0S8 358 aa18.45■□□□□ 0.54
LTBR-215ENST00000546296 OFD1O75665 1012 aa18.45■□□□□ 0.54
LTBR-215ENST00000546296 GCNT3O95395 438 aa18.45■□□□□ 0.54
LTBR-215ENST00000546296 LIG4P49917 911 aa18.45■□□□□ 0.54
LTBR-215ENST00000546296 ERVK-21P61565 698 aa18.45■□□□□ 0.54
LTBR-215ENST00000546296 GTF2BQ00403 316 aa18.45■□□□□ 0.54
LTBR-215ENST00000546296 COASYQ13057 564 aa18.45■□□□□ 0.54
LTBR-215ENST00000546296 CUL4BQ13620 913 aa18.45■□□□□ 0.54
LTBR-215ENST00000546296 ZNF568Q3ZCX4 644 aa18.45■□□□□ 0.54
LTBR-215ENST00000546296 ZC2HC1CQ53FD0 456 aaPredicted RBP18.45■□□□□ 0.54
LTBR-215ENST00000546296 ZPBP2Q6X784 338 aa18.45■□□□□ 0.54
LTBR-215ENST00000546296 AGMOQ6ZNB7 445 aa18.45■□□□□ 0.54
LTBR-215ENST00000546296 TMEM192Q8IY95 271 aa18.45■□□□□ 0.54
LTBR-215ENST00000546296 URGCPQ8TCY9 931 aa18.45■□□□□ 0.54
LTBR-215ENST00000546296 SAMD11Q96NU1 681 aa18.45■□□□□ 0.54
LTBR-215ENST00000546296 FIZ1Q96SL8 496 aa18.45■□□□□ 0.54
LTBR-215ENST00000546296 RNF39Q9H2S5 420 aa18.45■□□□□ 0.54
LTBR-215ENST00000546296 NXF3Q9H4D5 531 aaKnown RBP18.45■□□□□ 0.54
LTBR-215ENST00000546296 ST6GALNAC4Q9H4F1 302 aa18.45■□□□□ 0.54
LTBR-215ENST00000546296 PRDM12Q9H4Q4 367 aa18.45■□□□□ 0.54
LTBR-215ENST00000546296 TYW1Q9NV66 732 aaKnown RBP18.45■□□□□ 0.54
LTBR-215ENST00000546296 RWDD3Q9Y3V2 267 aa18.45■□□□□ 0.54
LTBR-215ENST00000546296 PCDHB13Q9Y5F0 798 aa18.45■□□□□ 0.54
LTBR-215ENST00000546296 CHD9Q3L8U1 2897 aa18.44■□□□□ 0.54
LTBR-215ENST00000546296 TOM1L1O75674 476 aa18.44■□□□□ 0.54
LTBR-215ENST00000546296 HARSP12081 509 aaKnown RBP18.44■□□□□ 0.54
LTBR-215ENST00000546296 AKAP5P24588 427 aa18.44■□□□□ 0.54
LTBR-215ENST00000546296 CTNNB1P35222 781 aa18.44■□□□□ 0.54
LTBR-215ENST00000546296 RNASELQ05823 741 aaKnown RBP18.44■□□□□ 0.54
LTBR-215ENST00000546296 NOMO2Q5JPE7 1267 aa18.44■□□□□ 0.54
LTBR-215ENST00000546296 KANK3Q6NY19 840 aa18.44■□□□□ 0.54
LTBR-215ENST00000546296 MPZL3Q6UWV2 235 aa18.44■□□□□ 0.54
LTBR-215ENST00000546296 KRBA2Q6ZNG9 492 aa18.44■□□□□ 0.54
LTBR-215ENST00000546296 STXBP4Q6ZWJ1 553 aa18.44■□□□□ 0.54
LTBR-215ENST00000546296 UNC13DQ70J99 1090 aa18.44■□□□□ 0.54
LTBR-215ENST00000546296 SPRED2Q7Z698 418 aa18.44■□□□□ 0.54
LTBR-215ENST00000546296 FBXO22Q8NEZ5 403 aa18.44■□□□□ 0.54
LTBR-215ENST00000546296 RSPH1Q8WYR4 309 aa18.44■□□□□ 0.54
LTBR-215ENST00000546296 MRPL9Q9BYD2 267 aaKnown RBP18.44■□□□□ 0.54
LTBR-215ENST00000546296 AAASQ9NRG9 546 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms