RNA–Protein interactions for RNA: ENST00000520940.1

EXTL3-208, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 542 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-208ENST00000520940 ITGA4P13612 1032 aa11.66□□□□□ -0.54
EXTL3-208ENST00000520940 HOXB8P17481 243 aaPredicted RBP11.66□□□□□ -0.54
EXTL3-208ENST00000520940 ARF4P18085 180 aaPredicted RBP11.66□□□□□ -0.54
EXTL3-208ENST00000520940 RPA1P27694 616 aa11.66□□□□□ -0.54
EXTL3-208ENST00000520940 MLH1P40692 756 aa11.66□□□□□ -0.54
EXTL3-208ENST00000520940 NCBP1Q09161 790 aaKnown RBP11.66□□□□□ -0.54
EXTL3-208ENST00000520940 NBR1Q14596 966 aa11.66□□□□□ -0.54
EXTL3-208ENST00000520940 CBX2Q14781 532 aaPredicted RBP11.66□□□□□ -0.54
EXTL3-208ENST00000520940 HAUS3Q68CZ6 603 aa11.66□□□□□ -0.54
EXTL3-208ENST00000520940 MAEAQ7L5Y9 396 aa11.66□□□□□ -0.54
EXTL3-208ENST00000520940 AUTS2Q8WXX7 1259 aa11.66□□□□□ -0.54
EXTL3-208ENST00000520940 NACC1Q96RE7 527 aa11.66□□□□□ -0.54
EXTL3-208ENST00000520940 TMEM175Q9BSA9 504 aa11.66□□□□□ -0.54
EXTL3-208ENST00000520940 TRIM6Q9C030 488 aaPredicted RBP11.66□□□□□ -0.54
EXTL3-208ENST00000520940 NXF3Q9H4D5 531 aaKnown RBP11.66□□□□□ -0.54
EXTL3-208ENST00000520940 UBN1Q9NPG3 1134 aa11.66□□□□□ -0.54
EXTL3-208ENST00000520940 GPRC5CQ9NQ84 441 aa11.66□□□□□ -0.54
EXTL3-208ENST00000520940 KANSL3Q9P2N6 904 aa11.66□□□□□ -0.54
EXTL3-208ENST00000520940 STK39Q9UEW8 545 aa11.66□□□□□ -0.54
EXTL3-208ENST00000520940 NOL7Q9UMY1 257 aaKnown RBP11.66□□□□□ -0.54
EXTL3-208ENST00000520940 HES2Q9Y543 173 aa11.66□□□□□ -0.54
EXTL3-208ENST00000520940 IRAK3Q9Y616 596 aa11.66□□□□□ -0.54
EXTL3-208ENST00000520940 ARHGEF35A5YM69 484 aa11.65□□□□□ -0.54
EXTL3-208ENST00000520940 ARL5CA6NH57 179 aa11.65□□□□□ -0.54
EXTL3-208ENST00000520940 POMCP01189 267 aa11.65□□□□□ -0.54
EXTL3-208ENST00000520940 PLA2G5P39877 138 aa11.65□□□□□ -0.54
EXTL3-208ENST00000520940 GIT2Q14161 759 aa11.65□□□□□ -0.54
EXTL3-208ENST00000520940 RABEP1Q15276 862 aa11.65□□□□□ -0.54
EXTL3-208ENST00000520940 PTPN14Q15678 1187 aa11.65□□□□□ -0.54
EXTL3-208ENST00000520940 TPRNQ4KMQ1 711 aa11.65□□□□□ -0.54
EXTL3-208ENST00000520940 CDCA2Q69YH5 1023 aaPredicted RBP11.65□□□□□ -0.54
EXTL3-208ENST00000520940 TMEM87AQ8NBN3 555 aa11.65□□□□□ -0.54
EXTL3-208ENST00000520940 RPGRIP1Q96KN7 1286 aa11.65□□□□□ -0.54
EXTL3-208ENST00000520940 GAD1Q99259 594 aa11.65□□□□□ -0.54
EXTL3-208ENST00000520940 APOL6Q9BWW8 343 aa11.65□□□□□ -0.54
EXTL3-208ENST00000520940 RNF39Q9H2S5 420 aa11.65□□□□□ -0.54
EXTL3-208ENST00000520940 ZMYM2Q9UBW7 1377 aa11.65□□□□□ -0.55
EXTL3-208ENST00000520940 CITO14578 2027 aa11.64□□□□□ -0.55
EXTL3-208ENST00000520940 KMT2EQ8IZD2 1858 aa11.64□□□□□ -0.55
EXTL3-208ENST00000520940 NPTXRO95502 500 aa11.64□□□□□ -0.55
EXTL3-208ENST00000520940 MUTP22033 750 aa11.64□□□□□ -0.55
EXTL3-208ENST00000520940 U2AF2P26368 475 aaKnown RBP eCLIP11.64□□□□□ -0.55
EXTL3-208ENST00000520940 FXR2P51116 673 aaKnown RBP eCLIP11.64□□□□□ -0.55
EXTL3-208ENST00000520940 SCNN1GP51170 649 aa11.64□□□□□ -0.55
EXTL3-208ENST00000520940 DSC1Q08554 894 aa11.64□□□□□ -0.55
EXTL3-208ENST00000520940 SLC27A1Q6PCB7 646 aa11.64□□□□□ -0.55
EXTL3-208ENST00000520940 PPP4R3CPQ6ZMV5 832 aa11.64□□□□□ -0.55
EXTL3-208ENST00000520940 CDR2LQ86X02 465 aaPredicted RBP11.64□□□□□ -0.55
EXTL3-208ENST00000520940 ZBTB8OSQ8IWT0 167 aa11.64□□□□□ -0.55
EXTL3-208ENST00000520940 COLGALT2Q8IYK4 626 aa11.64□□□□□ -0.55
EXTL3-208ENST00000520940 HACE1Q8IYU2 909 aa11.64□□□□□ -0.55
EXTL3-208ENST00000520940 C4orf32Q8N8J7 132 aa11.64□□□□□ -0.55
EXTL3-208ENST00000520940 PRIMPOLQ96LW4 560 aa11.64□□□□□ -0.55
EXTL3-208ENST00000520940 ZFP42Q96MM3 310 aa11.64□□□□□ -0.55
EXTL3-208ENST00000520940 PRMT7Q9NVM4 692 aaPredicted RBP11.64□□□□□ -0.55
EXTL3-208ENST00000520940 DZANK1Q9NVP4 752 aa11.64□□□□□ -0.55
EXTL3-208ENST00000520940 MARCH5Q9NX47 278 aa11.64□□□□□ -0.55
EXTL3-208ENST00000520940 CDH22Q9UJ99 828 aa11.64□□□□□ -0.55
EXTL3-208ENST00000520940 FAN1Q9Y2M0 1017 aa11.64□□□□□ -0.55
EXTL3-208ENST00000520940 GIT1Q9Y2X7 761 aa11.64□□□□□ -0.55
EXTL3-208ENST00000520940 PRG3Q9Y2Y8 225 aaPredicted RBP11.64□□□□□ -0.55
EXTL3-208ENST00000520940 ARIH1Q9Y4X5 557 aaPredicted RBP11.64□□□□□ -0.55
EXTL3-208ENST00000520940 VWA8A3KMH1 1905 aa11.63□□□□□ -0.55
EXTL3-208ENST00000520940 A0A1B0GUA9 196 aa11.63□□□□□ -0.55
EXTL3-208ENST00000520940 NRP1O14786 923 aa11.63□□□□□ -0.55
EXTL3-208ENST00000520940 ST18O60284 1047 aa11.63□□□□□ -0.55
EXTL3-208ENST00000520940 ALDH2P05091 517 aa11.63□□□□□ -0.55
EXTL3-208ENST00000520940 SSBP05455 408 aaKnown RBP eCLIP11.63□□□□□ -0.55
EXTL3-208ENST00000520940 EPCAMP16422 314 aa11.63□□□□□ -0.55
EXTL3-208ENST00000520940 CYP11B2P19099 503 aa11.63□□□□□ -0.55
EXTL3-208ENST00000520940 SP100P23497 879 aaPredicted RBP11.63□□□□□ -0.55
EXTL3-208ENST00000520940 CCT6AP40227 531 aaKnown RBP11.63□□□□□ -0.55
EXTL3-208ENST00000520940 OR1G1P47890 313 aa11.63□□□□□ -0.55
EXTL3-208ENST00000520940 TOB1P50616 345 aaPredicted RBP11.63□□□□□ -0.55
EXTL3-208ENST00000520940 ITIH3Q06033 890 aa11.63□□□□□ -0.55
EXTL3-208ENST00000520940 ECM1Q16610 540 aa11.63□□□□□ -0.55
EXTL3-208ENST00000520940 FAM187BQ17R55 369 aa11.63□□□□□ -0.55
EXTL3-208ENST00000520940 RARS2Q5T160 578 aaKnown RBP11.63□□□□□ -0.55
EXTL3-208ENST00000520940 CES5AQ6NT32 575 aa11.63□□□□□ -0.55
EXTL3-208ENST00000520940 PADI6Q6TGC4 694 aa11.63□□□□□ -0.55
EXTL3-208ENST00000520940 HFE2Q6ZVN8 426 aa11.63□□□□□ -0.55
EXTL3-208ENST00000520940 BSNDQ8WZ55 320 aa11.63□□□□□ -0.55
EXTL3-208ENST00000520940 EDAQ92838 391 aa11.63□□□□□ -0.55
EXTL3-208ENST00000520940 FAM122AQ96E09 287 aa11.63□□□□□ -0.55
EXTL3-208ENST00000520940 NECTIN4Q96NY8 510 aa11.63□□□□□ -0.55
EXTL3-208ENST00000520940 HERC2P3Q9BVR0 1158 aa11.63□□□□□ -0.55
EXTL3-208ENST00000520940 C2orf40Q9H1Z8 148 aa11.63□□□□□ -0.55
EXTL3-208ENST00000520940 ADAM7Q9H2U9 754 aa11.63□□□□□ -0.55
EXTL3-208ENST00000520940 LRWD1Q9UFC0 647 aa11.63□□□□□ -0.55
EXTL3-208ENST00000520940 KIF3AQ9Y496 699 aa11.63□□□□□ -0.55
EXTL3-208ENST00000520940 PCDHB6Q9Y5E3 794 aa11.63□□□□□ -0.55
EXTL3-208ENST00000520940 PDCD11Q14690 1871 aaKnown RBP11.62□□□□□ -0.55
EXTL3-208ENST00000520940 SOD2P04179 222 aa11.62□□□□□ -0.55
EXTL3-208ENST00000520940 PRKCBP05771 671 aa11.62□□□□□ -0.55
EXTL3-208ENST00000520940 URODP06132 367 aa11.62□□□□□ -0.55
EXTL3-208ENST00000520940 AKAP5P24588 427 aa11.62□□□□□ -0.55
EXTL3-208ENST00000520940 NAMPTP43490 491 aa11.62□□□□□ -0.55
EXTL3-208ENST00000520940 GRIK3Q13003 919 aa11.62□□□□□ -0.55
EXTL3-208ENST00000520940 PTGDRQ13258 359 aa11.62□□□□□ -0.55
EXTL3-208ENST00000520940 PPFIBP1Q86W92 1011 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms