RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 MBOAT7Q96N66 472 aa10.72□□□□□ -0.69
CLCN3-208ENST00000512813 DUSP15Q9H1R2 295 aaPredicted RBP10.72□□□□□ -0.69
CLCN3-208ENST00000512813 TOMM22Q9NS69 142 aa10.72□□□□□ -0.69
CLCN3-208ENST00000512813 DACT1Q9NYF0 836 aa10.72□□□□□ -0.69
CLCN3-208ENST00000512813 KCNH3Q9ULD8 1083 aa10.72□□□□□ -0.69
CLCN3-208ENST00000512813 COL1A2P08123 1366 aa10.72□□□□□ -0.69
CLCN3-208ENST00000512813 EVPLQ92817 2033 aa10.72□□□□□ -0.69
CLCN3-208ENST00000512813 UPK3BL1B0FP48 263 aa10.71□□□□□ -0.69
CLCN3-208ENST00000512813 UPK3BL2E5RIL1 263 aa10.71□□□□□ -0.69
CLCN3-208ENST00000512813 KHNYNO15037 678 aaKnown RBP10.71□□□□□ -0.69
CLCN3-208ENST00000512813 VTNP04004 478 aa10.71□□□□□ -0.69
CLCN3-208ENST00000512813 HOXA9P31269 272 aa10.71□□□□□ -0.69
CLCN3-208ENST00000512813 MLLT6P55198 1093 aaPredicted RBP10.71□□□□□ -0.69
CLCN3-208ENST00000512813 ELF2Q15723 593 aa10.71□□□□□ -0.69
CLCN3-208ENST00000512813 CCNI2Q6ZMN8 369 aaPredicted RBP10.71□□□□□ -0.69
CLCN3-208ENST00000512813 TAS1R1Q7RTX1 841 aa10.71□□□□□ -0.69
CLCN3-208ENST00000512813 MAP4K3Q8IVH8 894 aa10.71□□□□□ -0.69
CLCN3-208ENST00000512813 PNMA1Q8ND90 353 aa10.71□□□□□ -0.69
CLCN3-208ENST00000512813 IRF7Q92985 503 aa10.71□□□□□ -0.69
CLCN3-208ENST00000512813 MTMR8Q96EF0 704 aa10.71□□□□□ -0.69
CLCN3-208ENST00000512813 MSANTD3Q96H12 275 aa10.71□□□□□ -0.69
CLCN3-208ENST00000512813 SEC62Q99442 399 aaKnown RBP10.71□□□□□ -0.69
CLCN3-208ENST00000512813 NOTCH4Q99466 2003 aa10.71□□□□□ -0.69
CLCN3-208ENST00000512813 TMEM175Q9BSA9 504 aa10.71□□□□□ -0.69
CLCN3-208ENST00000512813 TRAIPQ9BWF2 469 aa10.71□□□□□ -0.69
CLCN3-208ENST00000512813 BCL11AQ9H165 835 aa10.71□□□□□ -0.69
CLCN3-208ENST00000512813 VAT1LQ9HCJ6 419 aa10.71□□□□□ -0.69
CLCN3-208ENST00000512813 ZNF334Q9HCZ1 680 aaPredicted RBP10.71□□□□□ -0.69
CLCN3-208ENST00000512813 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.71□□□□□ -0.69
CLCN3-208ENST00000512813 RBM12Q9NTZ6 932 aaKnown RBP10.71□□□□□ -0.69
CLCN3-208ENST00000512813 GDE1Q9NZC3 331 aa10.71□□□□□ -0.69
CLCN3-208ENST00000512813 FBXW11Q9UKB1 542 aa10.71□□□□□ -0.69
CLCN3-208ENST00000512813 INPP5FQ9Y2H2 1132 aa10.71□□□□□ -0.69
CLCN3-208ENST00000512813 PTPRQQ9UMZ3 2332 aa10.7□□□□□ -0.7
CLCN3-208ENST00000512813 NUP205Q92621 2012 aa10.7□□□□□ -0.7
CLCN3-208ENST00000512813 CAPN9O14815 690 aa10.7□□□□□ -0.7
CLCN3-208ENST00000512813 ZBTB5O15062 677 aa10.7□□□□□ -0.7
CLCN3-208ENST00000512813 POU2F2P09086 479 aa10.7□□□□□ -0.7
CLCN3-208ENST00000512813 EIF4BP23588 611 aaKnown RBP10.7□□□□□ -0.7
CLCN3-208ENST00000512813 FCARP24071 287 aa10.7□□□□□ -0.7
CLCN3-208ENST00000512813 CCNE1P24864 410 aa10.7□□□□□ -0.7
CLCN3-208ENST00000512813 PHKA2P46019 1235 aa10.7□□□□□ -0.7
CLCN3-208ENST00000512813 SLC26A2P50443 739 aa10.7□□□□□ -0.7
CLCN3-208ENST00000512813 STAT5BP51692 787 aa10.7□□□□□ -0.7
CLCN3-208ENST00000512813 GRM2Q14416 872 aa10.7□□□□□ -0.7
CLCN3-208ENST00000512813 WDR44Q5JSH3 913 aa10.7□□□□□ -0.7
CLCN3-208ENST00000512813 DGKKQ5KSL6 1271 aa10.7□□□□□ -0.7
CLCN3-208ENST00000512813 TANGO2Q6ICL3 276 aa10.7□□□□□ -0.7
CLCN3-208ENST00000512813 C1orf228Q6PIY5 440 aa10.7□□□□□ -0.7
CLCN3-208ENST00000512813 SCUBE3Q8IX30 993 aa10.7□□□□□ -0.7
CLCN3-208ENST00000512813 GPR65Q8IYL9 337 aa10.7□□□□□ -0.7
CLCN3-208ENST00000512813 FRAT1Q92837 279 aaPredicted RBP10.7□□□□□ -0.7
CLCN3-208ENST00000512813 LPPQ93052 612 aa10.7□□□□□ -0.7
CLCN3-208ENST00000512813 JPH1Q9HDC5 661 aaPredicted RBP10.7□□□□□ -0.7
CLCN3-208ENST00000512813 MARCH5Q9NX47 278 aa10.7□□□□□ -0.7
CLCN3-208ENST00000512813 FNIP2Q9P278 1114 aa10.7□□□□□ -0.7
CLCN3-208ENST00000512813 FAN1Q9Y2M0 1017 aa10.7□□□□□ -0.7
CLCN3-208ENST00000512813 PLXNB3Q9ULL4 1909 aa10.7□□□□□ -0.7
CLCN3-208ENST00000512813 ATMQ13315 3056 aa10.69□□□□□ -0.7
CLCN3-208ENST00000512813 MEIS3P2A8K0S8 358 aa10.69□□□□□ -0.7
CLCN3-208ENST00000512813 ZBTB42B2RXF5 422 aa10.69□□□□□ -0.7
CLCN3-208ENST00000512813 HBP1O60381 514 aa10.69□□□□□ -0.7
CLCN3-208ENST00000512813 XYLBO75191 536 aa10.69□□□□□ -0.7
CLCN3-208ENST00000512813 OFD1O75665 1012 aa10.69□□□□□ -0.7
CLCN3-208ENST00000512813 DDHD2O94830 711 aa10.69□□□□□ -0.7
CLCN3-208ENST00000512813 RHOBTB1O94844 696 aa10.69□□□□□ -0.7
CLCN3-208ENST00000512813 C22orf31O95567 290 aa10.69□□□□□ -0.7
CLCN3-208ENST00000512813 ALDH2P05091 517 aa10.69□□□□□ -0.7
CLCN3-208ENST00000512813 ABCG1P45844 678 aa10.69□□□□□ -0.7
CLCN3-208ENST00000512813 PXNP49023 591 aaPredicted RBP10.69□□□□□ -0.7
CLCN3-208ENST00000512813 CFHR1Q03591 330 aa10.69□□□□□ -0.7
CLCN3-208ENST00000512813 TRAF1Q13077 416 aa10.69□□□□□ -0.7
CLCN3-208ENST00000512813 LIN9Q5TKA1 542 aa10.69□□□□□ -0.7
CLCN3-208ENST00000512813 DGKHQ86XP1 1220 aa10.69□□□□□ -0.7
CLCN3-208ENST00000512813 ING5Q8WYH8 240 aa10.69□□□□□ -0.7
CLCN3-208ENST00000512813 TRMT61BQ9BVS5 477 aaKnown RBP10.69□□□□□ -0.7
CLCN3-208ENST00000512813 CHST7Q9NS84 486 aa10.69□□□□□ -0.7
CLCN3-208ENST00000512813 PDCD11Q14690 1871 aaKnown RBP10.69□□□□□ -0.7
CLCN3-208ENST00000512813 CCDC194A0A1B0GVG4 234 aa10.68□□□□□ -0.7
CLCN3-208ENST00000512813 TRIM6-TRIM34B2RNG4 842 aa10.68□□□□□ -0.7
CLCN3-208ENST00000512813 NRP1O14786 923 aa10.68□□□□□ -0.7
CLCN3-208ENST00000512813 CCL16O15467 120 aa10.68□□□□□ -0.7
CLCN3-208ENST00000512813 EXTL3O43909 919 aa10.68□□□□□ -0.7
CLCN3-208ENST00000512813 PARP1P09874 1014 aaKnown RBP10.68□□□□□ -0.7
CLCN3-208ENST00000512813 CREMQ03060 361 aa10.68□□□□□ -0.7
CLCN3-208ENST00000512813 SEMA3BQ13214 749 aa10.68□□□□□ -0.7
CLCN3-208ENST00000512813 PABPC1LQ4VXU2 614 aaKnown RBP10.68□□□□□ -0.7
CLCN3-208ENST00000512813 ZNF484Q5JVG2 852 aa10.68□□□□□ -0.7
CLCN3-208ENST00000512813 ZNF710Q8N1W2 664 aa10.68□□□□□ -0.7
CLCN3-208ENST00000512813 URGCPQ8TCY9 931 aa10.68□□□□□ -0.7
CLCN3-208ENST00000512813 ADAMTS14Q8WXS8 1223 aa10.68□□□□□ -0.7
CLCN3-208ENST00000512813 PKD2L1Q9P0L9 805 aa10.68□□□□□ -0.7
CLCN3-208ENST00000512813 SLC9A2Q9UBY0 812 aa10.68□□□□□ -0.7
CLCN3-208ENST00000512813 PCDHB15Q9Y5E8 787 aa10.68□□□□□ -0.7
CLCN3-208ENST00000512813 LRRK2Q5S007 2527 aa10.67□□□□□ -0.7
CLCN3-208ENST00000512813 FLNCQ14315 2725 aa10.67□□□□□ -0.7
CLCN3-208ENST00000512813 PATE3B3GLJ2 98 aa10.67□□□□□ -0.7
CLCN3-208ENST00000512813 MEFVO15553 781 aaPredicted RBP10.67□□□□□ -0.7
CLCN3-208ENST00000512813 RAB11FIP3O75154 756 aa10.67□□□□□ -0.7
CLCN3-208ENST00000512813 WISP1O95388 367 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms