RNA–Protein interactions for RNA: ENST00000497730.1

TRA2A-210, Transcript of transformer 2 alpha homolog, human

TSL 3

Gene TRA2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2A-210	ENST00000497730	MEGF9	Q9H1U4	602 aa		7.52	□□□□□ -1.21
TRA2A-210	ENST00000497730	IL23A	Q9NPF7	189 aa		7.52	□□□□□ -1.21
TRA2A-210	ENST00000497730	GIT1	Q9Y2X7	761 aa		7.52	□□□□□ -1.21
TRA2A-210	ENST00000497730		A0A1W2PRX2	142 aa		7.51	□□□□□ -1.21
TRA2A-210	ENST00000497730	NPEPPSL1	A6NEC2	478 aa		7.51	□□□□□ -1.21
TRA2A-210	ENST00000497730	NRP1	O14786	923 aa		7.51	□□□□□ -1.21
TRA2A-210	ENST00000497730	PLAT	P00750	562 aa		7.51	□□□□□ -1.21
TRA2A-210	ENST00000497730	ECHS1	P30084	290 aa		7.51	□□□□□ -1.21
TRA2A-210	ENST00000497730	ADAM8	P78325	824 aa		7.51	□□□□□ -1.21
TRA2A-210	ENST00000497730	RIN1	Q13671	783 aa		7.51	□□□□□ -1.21
TRA2A-210	ENST00000497730	PPP2R5A	Q15172	486 aa		7.51	□□□□□ -1.21
TRA2A-210	ENST00000497730	C19orf54	Q5BKX5	351 aa		7.51	□□□□□ -1.21
TRA2A-210	ENST00000497730	ZFYVE27	Q5T4F4	411 aa		7.51	□□□□□ -1.21
TRA2A-210	ENST00000497730	TAX1BP1	Q86VP1	789 aa		7.51	□□□□□ -1.21
TRA2A-210	ENST00000497730	GIMAP8	Q8ND71	665 aa	Predicted RBP	7.51	□□□□□ -1.21
TRA2A-210	ENST00000497730	ZNF480	Q8WV37	535 aa		7.51	□□□□□ -1.21
TRA2A-210	ENST00000497730	CDH19	Q9H159	772 aa		7.51	□□□□□ -1.21
TRA2A-210	ENST00000497730	CSRNP2	Q9H175	543 aa		7.51	□□□□□ -1.21
TRA2A-210	ENST00000497730	PPP4R1L	Q9P1A2	415 aa		7.51	□□□□□ -1.21
TRA2A-210	ENST00000497730	SERPINB13	Q9UIV8	391 aa		7.51	□□□□□ -1.21
TRA2A-210	ENST00000497730	ANKRD6	Q9Y2G4	727 aa		7.51	□□□□□ -1.21
TRA2A-210	ENST00000497730	MTSS1	O43312	755 aa		7.5	□□□□□ -1.21
TRA2A-210	ENST00000497730	PHF2	O75151	1096 aa		7.5	□□□□□ -1.21
TRA2A-210	ENST00000497730	HOXA5	P20719	270 aa		7.5	□□□□□ -1.21
TRA2A-210	ENST00000497730	CASR	P41180	1078 aa		7.5	□□□□□ -1.21
TRA2A-210	ENST00000497730	ADK	P55263	362 aa	Known RBP	7.5	□□□□□ -1.21
TRA2A-210	ENST00000497730	WNT3A	P56704	352 aa		7.5	□□□□□ -1.21
TRA2A-210	ENST00000497730	LRRC41	Q15345	812 aa		7.5	□□□□□ -1.21
TRA2A-210	ENST00000497730	NFE2	Q16621	373 aa	Predicted RBP	7.5	□□□□□ -1.21
TRA2A-210	ENST00000497730	MST1L	Q2TV78	715 aa		7.5	□□□□□ -1.21
TRA2A-210	ENST00000497730	GLB1L	Q6UWU2	654 aa		7.5	□□□□□ -1.21
TRA2A-210	ENST00000497730	GPR135	Q8IZ08	494 aa		7.5	□□□□□ -1.21
TRA2A-210	ENST00000497730	CMTM4	Q8IZR5	234 aa		7.5	□□□□□ -1.21
TRA2A-210	ENST00000497730	OR5M3	Q8NGP4	307 aa		7.5	□□□□□ -1.21
TRA2A-210	ENST00000497730	TMEM176A	Q96HP8	235 aa		7.5	□□□□□ -1.21
TRA2A-210	ENST00000497730	OR14A2	Q96R54	314 aa		7.5	□□□□□ -1.21
TRA2A-210	ENST00000497730	PLA2G12B	Q9BX93	195 aa		7.5	□□□□□ -1.21
TRA2A-210	ENST00000497730	AGO3	Q9H9G7	860 aa	Known RBP	7.5	□□□□□ -1.21
TRA2A-210	ENST00000497730	TCF7L1	Q9HCS4	588 aa		7.5	□□□□□ -1.21
TRA2A-210	ENST00000497730		A0A0G2JLL6	359 aa	Predicted RBP	7.49	□□□□□ -1.21
TRA2A-210	ENST00000497730	UBE2QL1	A1L167	161 aa		7.49	□□□□□ -1.21
TRA2A-210	ENST00000497730	SCGB1D2	O95969	90 aa		7.49	□□□□□ -1.21
TRA2A-210	ENST00000497730	NPEPPS	P55786	919 aa		7.49	□□□□□ -1.21
TRA2A-210	ENST00000497730	PER3	P56645	1201 aa		7.49	□□□□□ -1.21
TRA2A-210	ENST00000497730	MGAT2	Q10469	447 aa		7.49	□□□□□ -1.21
TRA2A-210	ENST00000497730	LIMS2	Q7Z4I7	341 aa		7.49	□□□□□ -1.21
TRA2A-210	ENST00000497730	ADGRE4P	Q86SQ3	457 aa		7.49	□□□□□ -1.21
TRA2A-210	ENST00000497730	OR2I1P	Q8NGU4	316 aa		7.49	□□□□□ -1.21
TRA2A-210	ENST00000497730	COA7	Q96BR5	231 aa		7.49	□□□□□ -1.21
TRA2A-210	ENST00000497730	UHRF1	Q96T88	793 aa	Predicted RBP	7.49	□□□□□ -1.21
TRA2A-210	ENST00000497730	GPRC5D	Q9NZD1	345 aa		7.49	□□□□□ -1.21
TRA2A-210	ENST00000497730	NOB1	Q9ULX3	412 aa	Known RBP	7.49	□□□□□ -1.21
TRA2A-210	ENST00000497730	LIMCH1	Q9UPQ0	1083 aa		7.49	□□□□□ -1.21
TRA2A-210	ENST00000497730	CCDC154	A6NI56	674 aa		7.48	□□□□□ -1.21
TRA2A-210	ENST00000497730	FAM171A2	A8MVW0	826 aa		7.48	□□□□□ -1.21
TRA2A-210	ENST00000497730	ITGA10	O75578	1167 aa		7.48	□□□□□ -1.21
TRA2A-210	ENST00000497730	GYPE	P15421	78 aa		7.48	□□□□□ -1.21
TRA2A-210	ENST00000497730	SEPT2	Q15019	361 aa		7.48	□□□□□ -1.21
TRA2A-210	ENST00000497730	LCE4A	Q5TA78	99 aa		7.48	□□□□□ -1.21
TRA2A-210	ENST00000497730		Q6ZVL8	140 aa		7.48	□□□□□ -1.21
TRA2A-210	ENST00000497730	MIGA2	Q7L4E1	593 aa		7.48	□□□□□ -1.21
TRA2A-210	ENST00000497730	FMNL3	Q8IVF7	1028 aa		7.48	□□□□□ -1.21
TRA2A-210	ENST00000497730	CHPF	Q8IZ52	775 aa		7.48	□□□□□ -1.21
TRA2A-210	ENST00000497730	CDC5L	Q99459	802 aa	Known RBP	7.48	□□□□□ -1.21
TRA2A-210	ENST00000497730	C7orf25	Q9BPX7	421 aa		7.48	□□□□□ -1.21
TRA2A-210	ENST00000497730	TCF25	Q9BQ70	676 aa		7.48	□□□□□ -1.21
TRA2A-210	ENST00000497730	PMS2P1	A4D2B8	440 aa		7.47	□□□□□ -1.21
TRA2A-210	ENST00000497730	ADCY6	O43306	1168 aa		7.47	□□□□□ -1.21
TRA2A-210	ENST00000497730	NFIX	Q14938	502 aa		7.47	□□□□□ -1.21
TRA2A-210	ENST00000497730	GJC2	Q5T442	439 aa	Predicted RBP	7.47	□□□□□ -1.21
TRA2A-210	ENST00000497730	TTLL10	Q6ZVT0	673 aa		7.47	□□□□□ -1.21
TRA2A-210	ENST00000497730	CIR1	Q86X95	450 aa	Predicted RBP	7.47	□□□□□ -1.21
TRA2A-210	ENST00000497730	TPH2	Q8IWU9	490 aa		7.47	□□□□□ -1.21
TRA2A-210	ENST00000497730	PQLC1	Q8N2U9	271 aa		7.47	□□□□□ -1.21
TRA2A-210	ENST00000497730	LILRA3	Q8N6C8	439 aa	Predicted RBP	7.47	□□□□□ -1.21
TRA2A-210	ENST00000497730	FBXO18	Q8NFZ0	1043 aa		7.47	□□□□□ -1.21
TRA2A-210	ENST00000497730	HOXB13	Q92826	284 aa	Predicted RBP	7.47	□□□□□ -1.21
TRA2A-210	ENST00000497730	ARL8A	Q96BM9	186 aa		7.47	□□□□□ -1.21
TRA2A-210	ENST00000497730	EPC1	Q9H2F5	836 aa		7.47	□□□□□ -1.21
TRA2A-210	ENST00000497730	NELFA	Q9H3P2	528 aa		7.47	□□□□□ -1.21
TRA2A-210	ENST00000497730	RTEL1	Q9NZ71	1219 aa		7.47	□□□□□ -1.21
TRA2A-210	ENST00000497730	TRPS1	Q9UHF7	1281 aa		7.47	□□□□□ -1.21
TRA2A-210	ENST00000497730	HTRA2	O43464	458 aa	Predicted RBP	7.46	□□□□□ -1.22
TRA2A-210	ENST00000497730	TSPAN6	O43657	245 aa		7.46	□□□□□ -1.22
TRA2A-210	ENST00000497730	ENDOD1	O94919	500 aa		7.46	□□□□□ -1.22
TRA2A-210	ENST00000497730	PARN	O95453	639 aa	Known RBP	7.46	□□□□□ -1.22
TRA2A-210	ENST00000497730	GAST	P01350	101 aa		7.46	□□□□□ -1.22
TRA2A-210	ENST00000497730	VCAM1	P19320	739 aa		7.46	□□□□□ -1.22
TRA2A-210	ENST00000497730	RPS19	P39019	145 aa	Known RBP	7.46	□□□□□ -1.22
TRA2A-210	ENST00000497730	WAS	P42768	502 aa		7.46	□□□□□ -1.22
TRA2A-210	ENST00000497730	GRM7	Q14831	915 aa		7.46	□□□□□ -1.22
TRA2A-210	ENST00000497730	TCTN3	Q6NUS6	607 aa		7.46	□□□□□ -1.22
TRA2A-210	ENST00000497730	CATIP	Q7Z7H3	387 aa		7.46	□□□□□ -1.22
TRA2A-210	ENST00000497730	RHOT1	Q8IXI2	618 aa		7.46	□□□□□ -1.22
TRA2A-210	ENST00000497730	REPS2	Q8NFH8	660 aa		7.46	□□□□□ -1.22
TRA2A-210	ENST00000497730	OR7D4	Q8NG98	312 aa		7.46	□□□□□ -1.22
TRA2A-210	ENST00000497730	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	7.46	□□□□□ -1.22	5e-42	■■□□□ 12
TRA2A-210	ENST00000497730	MDM1	Q8TC05	714 aa		7.46	□□□□□ -1.22
TRA2A-210	ENST00000497730	TSR2	Q969E8	191 aa	Known RBP	7.46	□□□□□ -1.22
TRA2A-210	ENST00000497730	HDAC10	Q969S8	669 aa		7.46	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms