RNA–Protein interactions for RNA: ENST00000497730.1

TRA2A-210, Transcript of transformer 2 alpha homolog, humanhuman

TSL 3

Gene TRA2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-210ENST00000497730 AEBP2Q6ZN18 517 aaPredicted RBP28.26■■■□□ 2.11
TRA2A-210ENST00000497730 CHIC1Q5VXU3 224 aa27.84■■■□□ 2.05
TRA2A-210ENST00000497730 PHF23Q9BUL5 403 aaPredicted RBP24.51■■□□□ 1.51
TRA2A-210ENST00000497730 SENP3Q9H4L4 574 aaPredicted RBP24.01■■□□□ 1.43
TRA2A-210ENST00000497730 PLPPR3Q6T4P5 718 aa22.74■■□□□ 1.23
TRA2A-210ENST00000497730 FOXD1Q16676 465 aa22.45■■□□□ 1.18
TRA2A-210ENST00000497730 ADRA2BP18089 450 aa21.58■■□□□ 1.05
TRA2A-210ENST00000497730 POTEDQ86YR6 584 aa21.57■■□□□ 1.04
TRA2A-210ENST00000497730 PPP6R1Q9UPN7 881 aa21.57■■□□□ 1.04
TRA2A-210ENST00000497730 PIAS4Q8N2W9 510 aaPredicted RBP21.02■□□□□ 0.96
TRA2A-210ENST00000497730 MSH5O43196 834 aa20.95■□□□□ 0.94
TRA2A-210ENST00000497730 PPP4R3CPQ6ZMV5 832 aa20.09■□□□□ 0.81
TRA2A-210ENST00000497730 KCNA4P22459 653 aa19.94■□□□□ 0.78
TRA2A-210ENST00000497730 SCAF1Q9H7N4 1312 aaKnown RBP19.73■□□□□ 0.75
TRA2A-210ENST00000497730 NCBP3Q53F19 620 aaKnown RBP19.64■□□□□ 0.73
TRA2A-210ENST00000497730 MAPK8IP2Q13387 824 aaPredicted RBP19.51■□□□□ 0.71
TRA2A-210ENST00000497730 CNKSR2Q8WXI2 1034 aa19.44■□□□□ 0.7
TRA2A-210ENST00000497730 NPM3O75607 178 aaKnown RBP19.34■□□□□ 0.69
TRA2A-210ENST00000497730 DMRT2Q9Y5R5 561 aa19.14■□□□□ 0.65
TRA2A-210ENST00000497730 SLC4A1APQ9BWU0 796 aaKnown RBP19.04■□□□□ 0.64
TRA2A-210ENST00000497730 RNF216Q9NWF9 866 aaPredicted RBP18.99■□□□□ 0.63
TRA2A-210ENST00000497730 EHMT2Q96KQ7 1210 aa18.86■□□□□ 0.61
TRA2A-210ENST00000497730 HOXD11P31277 338 aaPredicted RBP18.83■□□□□ 0.6
TRA2A-210ENST00000497730 DNAJC5BQ9UF47 199 aa18.63■□□□□ 0.57
TRA2A-210ENST00000497730 CSRNP3Q8WYN3 585 aa18.45■□□□□ 0.54
TRA2A-210ENST00000497730 DCAF8L1A6NGE4 600 aa18.41■□□□□ 0.54
TRA2A-210ENST00000497730 CACNB1Q02641 598 aaPredicted RBP18.35■□□□□ 0.53
TRA2A-210ENST00000497730 ZBTB22O15209 634 aa18.34■□□□□ 0.53
TRA2A-210ENST00000497730 FOXD4L1Q9NU39 408 aa18.25■□□□□ 0.51
TRA2A-210ENST00000497730 SLC4A2P04920 1241 aa18.19■□□□□ 0.5
TRA2A-210ENST00000497730 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.02■□□□□ 0.48
TRA2A-210ENST00000497730 RNF39Q9H2S5 420 aa17.93■□□□□ 0.46
TRA2A-210ENST00000497730 MYCNP04198 464 aaPredicted RBP17.86■□□□□ 0.45
TRA2A-210ENST00000497730 U3KPZ7 1027 aaPredicted RBP17.72■□□□□ 0.43
TRA2A-210ENST00000497730 C1QBPQ07021 282 aaKnown RBP17.61■□□□□ 0.41
TRA2A-210ENST00000497730 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.58■□□□□ 0.4
TRA2A-210ENST00000497730 HNRNPUL2Q1KMD3 747 aaKnown RBP17.58■□□□□ 0.4
TRA2A-210ENST00000497730 ATXN8OSP0DMR3 200 aa17.57■□□□□ 0.4
TRA2A-210ENST00000497730 SAMD1Q6SPF0 538 aaPredicted RBP17.54■□□□□ 0.4
TRA2A-210ENST00000497730 ATF5Q9Y2D1 282 aaPredicted RBP17.39■□□□□ 0.37
TRA2A-210ENST00000497730 APLP2Q06481 763 aa17.34■□□□□ 0.37
TRA2A-210ENST00000497730 SPINK5Q9NQ38 1064 aaPredicted RBP17.18■□□□□ 0.34
TRA2A-210ENST00000497730 CAPN15O75808 1086 aa17.11■□□□□ 0.33
TRA2A-210ENST00000497730 TRHP20396 242 aaPredicted RBP17.1■□□□□ 0.33
TRA2A-210ENST00000497730 ZNF219Q9P2Y4 722 aaPredicted RBP17.09■□□□□ 0.33
TRA2A-210ENST00000497730 POLA2Q14181 598 aa16.86■□□□□ 0.29
TRA2A-210ENST00000497730 ABCB7O75027 752 aa16.82■□□□□ 0.28
TRA2A-210ENST00000497730 DSG3P32926 999 aa16.76■□□□□ 0.27
TRA2A-210ENST00000497730 POTEHQ6S545 545 aa16.74■□□□□ 0.27
TRA2A-210ENST00000497730 FKBP8Q14318 412 aa16.7■□□□□ 0.26
TRA2A-210ENST00000497730 FBLN2P98095 1184 aa16.66■□□□□ 0.26
TRA2A-210ENST00000497730 MKRN4PQ13434 485 aaPredicted RBP16.62■□□□□ 0.25
TRA2A-210ENST00000497730 ZBTB12Q9Y330 459 aaPredicted RBP16.57■□□□□ 0.24
TRA2A-210ENST00000497730 SPDYE4A6NLX3 237 aa16.41■□□□□ 0.22
TRA2A-210ENST00000497730 OSCARQ8IYS5 282 aa16.29■□□□□ 0.2
TRA2A-210ENST00000497730 ZNF692Q9BU19 519 aaPredicted RBP16.16■□□□□ 0.18
TRA2A-210ENST00000497730 SPDYE2BA6NHP3 402 aa16.14■□□□□ 0.17
TRA2A-210ENST00000497730 SPDYE6P0CI01 402 aa16.14■□□□□ 0.17
TRA2A-210ENST00000497730 SPDYE2Q495Y8 402 aa16.14■□□□□ 0.17
TRA2A-210ENST00000497730 PROM2Q8N271 834 aa16.11■□□□□ 0.17
TRA2A-210ENST00000497730 SSUH2Q9Y2M2 353 aa16.03■□□□□ 0.16
TRA2A-210ENST00000497730 FBXO3Q9UK99 471 aa16.01■□□□□ 0.15
TRA2A-210ENST00000497730 PABPN1Q86U42 306 aaKnown RBP eCLIP15.96■□□□□ 0.15
TRA2A-210ENST00000497730 RBM42Q9BTD8 480 aaKnown RBP15.92■□□□□ 0.14
TRA2A-210ENST00000497730 VASPP50552 380 aaPredicted RBP15.79■□□□□ 0.12
TRA2A-210ENST00000497730 AKT1S1Q96B36 256 aa15.77■□□□□ 0.12
TRA2A-210ENST00000497730 STAG3Q9UJ98 1225 aa15.71■□□□□ 0.11
TRA2A-210ENST00000497730 CHRDL2Q6WN34 429 aa15.68■□□□□ 0.1
TRA2A-210ENST00000497730 AMER1Q5JTC6 1135 aaPredicted RBP15.66■□□□□ 0.1
TRA2A-210ENST00000497730 REM2Q8IYK8 340 aaPredicted RBP15.65■□□□□ 0.1
TRA2A-210ENST00000497730 RTN4Q9NQC3 1192 aaKnown RBP15.65■□□□□ 0.1
TRA2A-210ENST00000497730 SPDYE1Q8NFV5 336 aaPredicted RBP15.62■□□□□ 0.09
TRA2A-210ENST00000497730 IFNLR1Q8IU57 520 aaPredicted RBP15.59■□□□□ 0.09
TRA2A-210ENST00000497730 CLEC11AQ9Y240 323 aa15.58■□□□□ 0.08
TRA2A-210ENST00000497730 PLCD3Q8N3E9 789 aa15.57■□□□□ 0.08
TRA2A-210ENST00000497730 MIER1Q8N108 512 aa15.56■□□□□ 0.08
TRA2A-210ENST00000497730 KLHL34Q8N239 644 aa15.5■□□□□ 0.07
TRA2A-210ENST00000497730 PITPNM1O00562 1244 aa15.47■□□□□ 0.07
TRA2A-210ENST00000497730 PRR29P0C7W0 189 aa15.46■□□□□ 0.07
TRA2A-210ENST00000497730 PLEKHG5O94827 1062 aa15.45■□□□□ 0.06
TRA2A-210ENST00000497730 SP7Q8TDD2 431 aaPredicted RBP15.41■□□□□ 0.06
TRA2A-210ENST00000497730 SPOCK2Q92563 424 aa15.37■□□□□ 0.05
TRA2A-210ENST00000497730 ZBTB47Q9UFB7 747 aaPredicted RBP15.33■□□□□ 0.04
TRA2A-210ENST00000497730 PIP4P2Q8N4L2 257 aa15.3■□□□□ 0.04
TRA2A-210ENST00000497730 CREBZFQ9NS37 354 aa15.29■□□□□ 0.04
TRA2A-210ENST00000497730 FXR2P51116 673 aaKnown RBP eCLIP15.17■□□□□ 0.02
TRA2A-210ENST00000497730 CHADLQ6NUI6 762 aa15.17■□□□□ 0.02
TRA2A-210ENST00000497730 PKD2Q13563 968 aa15.16■□□□□ 0.02
TRA2A-210ENST00000497730 MNX1P50219 401 aaPredicted RBP15.15■□□□□ 0.02
TRA2A-210ENST00000497730 CIZ1Q9ULV3 898 aaPredicted RBP15.12■□□□□ 0.01
TRA2A-210ENST00000497730 PRKAR2AP13861 404 aaKnown RBP15.09■□□□□ 0.01
TRA2A-210ENST00000497730 NUBP1P53384 320 aa15.08■□□□□ 0
TRA2A-210ENST00000497730 NPM1P06748 294 aaKnown RBP eCLIP15.06■□□□□ 0
TRA2A-210ENST00000497730 ECM2O94769 699 aaPredicted RBP15.05■□□□□ -0
TRA2A-210ENST00000497730 HAX1O00165 279 aa15.03■□□□□ -0
TRA2A-210ENST00000497730 FARP1Q9Y4F1 1045 aaPredicted RBP15.02■□□□□ -0
TRA2A-210ENST00000497730 DCAF8L2P0C7V8 631 aa15.01□□□□□ -0.01
TRA2A-210ENST00000497730 DCAF8Q5TAQ9 597 aa15.01□□□□□ -0.01
TRA2A-210ENST00000497730 GSE1Q14687 1217 aa14.99□□□□□ -0.01
TRA2A-210ENST00000497730 FAM212AQ96EL1 285 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms