RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 TTC23LQ6PF05 361 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 MXRA8Q9BRK3 442 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 ZMYND12Q9H0C1 365 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 FAM96AQ9H5X1 160 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 KRT38O76015 456 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 CYBBP04839 570 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 VEGFAP15692 232 aaPredicted RBP10.08□□□□□ -0.8
GARNL3-216ENST00000481242 TAC1P20366 129 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 PCSK1P29120 753 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 CYP2C19P33261 490 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 GNGT1P63211 74 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 EDRF1Q3B7T1 1238 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 CYP4F22Q6NT55 531 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 MOXD1Q6UVY6 613 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 CYFIP1Q7L576 1253 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 FAM83AQ86UY5 434 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 MOV10L1Q9BXT6 1211 aaKnown RBP10.08□□□□□ -0.8
GARNL3-216ENST00000481242 ENC1O14682 589 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 FOXP2O15409 715 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 MAP3K7O43318 606 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 DHX9Q08211 1270 aaKnown RBP10.08□□□□□ -0.8
GARNL3-216ENST00000481242 DYNC1I2Q13409 638 aaKnown RBP10.08□□□□□ -0.8
GARNL3-216ENST00000481242 SNX1Q13596 522 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 CDO1Q16878 200 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 ZNF394Q53GI3 561 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 ALS2CLQ60I27 953 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 MYLK4Q86YV6 388 aaPredicted RBP10.08□□□□□ -0.8
GARNL3-216ENST00000481242 MKNK1Q9BUB5 465 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 TRIM9Q9C026 710 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 LSM7Q9UK45 103 aaKnown RBP10.08□□□□□ -0.8
GARNL3-216ENST00000481242 EXOC1LA0A1B0GW35 172 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 ARHGAP42A6NI28 874 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 COBLO75128 1261 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 SOX5P35711 763 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 RFX5P48382 616 aaPredicted RBP10.08□□□□□ -0.8
GARNL3-216ENST00000481242 KRT33BQ14525 404 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 SNX17Q15036 470 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 CDKL3Q8IVW4 592 aaPredicted RBP10.08□□□□□ -0.8
GARNL3-216ENST00000481242 RHOT1Q8IXI2 618 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 MCUQ8NE86 351 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 BATF3Q9NR55 127 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 RPS6KA5O75582 802 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 PLS3P13797 630 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 CYP2B6P20813 491 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 CAP2P40123 477 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 HSD17B4P51659 736 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 DRAP1Q14919 205 aaPredicted RBP10.08□□□□□ -0.8
GARNL3-216ENST00000481242 SGSM1Q2NKQ1 1148 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 CCDC92Q53HC0 331 aaPredicted RBP10.08□□□□□ -0.8
GARNL3-216ENST00000481242 C6orf118Q5T5N4 469 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 ZNF746Q6NUN9 644 aaPredicted RBP10.08□□□□□ -0.8
GARNL3-216ENST00000481242 DCP1BQ8IZD4 617 aaKnown RBP10.08□□□□□ -0.8
GARNL3-216ENST00000481242 TAB3Q8N5C8 712 aaPredicted RBP10.08□□□□□ -0.8
GARNL3-216ENST00000481242 IFT43Q96FT9 208 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 GDAP1L1Q96MZ0 367 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 C7orf25Q9BPX7 421 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 Q9H521 79 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 SMYD2Q9NRG4 433 aa10.08□□□□□ -0.8
GARNL3-216ENST00000481242 DIP2BQ9P265 1576 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 P4HA2O15460 535 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 CYP27A1Q02318 531 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 ADCY2Q08462 1091 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 PDIA6Q15084 440 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 ACRBPQ8NEB7 543 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 EPAS1Q99814 870 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 C11orf70Q9BRQ4 267 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 FSD1LQ9BXM9 530 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 AAASQ9NRG9 546 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 SPATA31D1Q6ZQQ2 1576 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 NEMP1O14524 444 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 RASGRF2O14827 1237 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 KPNA6O60684 536 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 ICAM1P05362 532 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 SRGNP10124 158 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 RPA1P27694 616 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 SLC26A2P50443 739 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 COL23A1Q86Y22 540 aaPredicted RBP10.07□□□□□ -0.8
GARNL3-216ENST00000481242 YAF2Q8IY57 180 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 ELOA2Q8IYF1 753 aaPredicted RBP10.07□□□□□ -0.8
GARNL3-216ENST00000481242 AFG1LQ8WV93 481 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 PPP1R2P1Q96PQ5 205 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 PPP1R12CQ9BZL4 782 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 WNT8AQ9H1J5 351 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 ZWILCHQ9H900 591 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 GJB4Q9NTQ9 266 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 PARVAQ9NVD7 372 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 BFARQ9NZS9 450 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 ATP8A1Q9Y2Q0 1164 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 STAG3L1P0CL83 205 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 PNPLA4P41247 253 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 SLC1A1P43005 524 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 PSMD7P51665 324 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 SNCBQ16143 134 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 ATG16L1Q676U5 607 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 SPOPLQ6IQ16 392 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 HSPH1Q92598 858 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 FAF2Q96CS3 445 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 PLEKHA4Q9H4M7 779 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 ABHD10Q9NUJ1 306 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 EPS15L1Q9UBC2 864 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms