RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 SMG5Q9UPR3 1016 aaKnown RBP8.51□□□□□ -1.05
CBX3-206ENST00000481057 MAPRE3Q9UPY8 281 aa8.51□□□□□ -1.05
CBX3-206ENST00000481057 PRKAB1Q9Y478 270 aa8.51□□□□□ -1.05
CBX3-206ENST00000481057 POLR2AP24928 1970 aaKnown RBP8.51□□□□□ -1.05
CBX3-206ENST00000481057 SPTBN4Q9H254 2564 aa8.51□□□□□ -1.05
CBX3-206ENST00000481057 CDHR2Q9BYE9 1310 aa8.51□□□□□ -1.05
CBX3-206ENST00000481057 KDM3BQ7LBC6 1761 aa8.5□□□□□ -1.05
CBX3-206ENST00000481057 NPC1L1Q9UHC9 1359 aa8.5□□□□□ -1.05
CBX3-206ENST00000481057 FAM90A27PA6NNH2 459 aa8.5□□□□□ -1.05
CBX3-206ENST00000481057 ACOT7O00154 380 aa8.5□□□□□ -1.05
CBX3-206ENST00000481057 SYN1P17600 705 aa8.5□□□□□ -1.05
CBX3-206ENST00000481057 NKX3-2P78367 333 aa8.5□□□□□ -1.05
CBX3-206ENST00000481057 FOXO4P98177 505 aa8.5□□□□□ -1.05
CBX3-206ENST00000481057 CXCL9Q07325 125 aa8.5□□□□□ -1.05
CBX3-206ENST00000481057 SEPT7Q16181 437 aaKnown RBP8.5□□□□□ -1.05
CBX3-206ENST00000481057 PKN1Q16512 942 aa8.5□□□□□ -1.05
CBX3-206ENST00000481057 RNF180Q86T96 592 aa8.5□□□□□ -1.05
CBX3-206ENST00000481057 EPB41L4AQ9HCS5 686 aaPredicted RBP8.5□□□□□ -1.05
CBX3-206ENST00000481057 RIC8BQ9NVN3 520 aa8.5□□□□□ -1.05
CBX3-206ENST00000481057 CNOT7Q9UIV1 285 aaKnown RBP8.5□□□□□ -1.05
CBX3-206ENST00000481057 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.5□□□□□ -1.05
CBX3-206ENST00000481057 SOS1Q07889 1333 aaPredicted RBP8.5□□□□□ -1.05
CBX3-206ENST00000481057 KTN1Q86UP2 1357 aaKnown RBP8.49□□□□□ -1.05
CBX3-206ENST00000481057 SBNO2Q9Y2G9 1366 aa8.49□□□□□ -1.05
CBX3-206ENST00000481057 UBE2Q2LH0YL09 131 aa8.49□□□□□ -1.05
CBX3-206ENST00000481057 H7C1D1 291 aa8.49□□□□□ -1.05
CBX3-206ENST00000481057 SMIM22K7EJ46 135 aa8.49□□□□□ -1.05
CBX3-206ENST00000481057 NPHP1O15259 732 aa8.49□□□□□ -1.05
CBX3-206ENST00000481057 C8AP07357 584 aa8.49□□□□□ -1.05
CBX3-206ENST00000481057 GJB1P08034 283 aa8.49□□□□□ -1.05
CBX3-206ENST00000481057 ZBTB48P10074 688 aaPredicted RBP8.49□□□□□ -1.05
CBX3-206ENST00000481057 NPR1P16066 1061 aa8.49□□□□□ -1.05
CBX3-206ENST00000481057 PI3P19957 117 aa8.49□□□□□ -1.05
CBX3-206ENST00000481057 RAP1GAPP47736 663 aa8.49□□□□□ -1.05
CBX3-206ENST00000481057 AMPHP49418 695 aa8.49□□□□□ -1.05
CBX3-206ENST00000481057 MRPS5P82675 430 aaKnown RBP8.49□□□□□ -1.05
CBX3-206ENST00000481057 IRF9Q00978 393 aa8.49□□□□□ -1.05
CBX3-206ENST00000481057 SEC23AQ15436 765 aa8.49□□□□□ -1.05
CBX3-206ENST00000481057 ZNF124Q15973 351 aa8.49□□□□□ -1.05
CBX3-206ENST00000481057 TBC1D9BQ66K14 1250 aa8.49□□□□□ -1.05
CBX3-206ENST00000481057 CPZQ66K79 652 aa8.49□□□□□ -1.05
CBX3-206ENST00000481057 ZNF662Q6ZS27 426 aa8.49□□□□□ -1.05
CBX3-206ENST00000481057 MOB2Q70IA6 237 aa8.49□□□□□ -1.05
CBX3-206ENST00000481057 FAM129CQ86XR2 697 aa8.49□□□□□ -1.05
CBX3-206ENST00000481057 KIF18BQ86Y91 864 aa8.49□□□□□ -1.05
CBX3-206ENST00000481057 CDCA5Q96FF9 252 aa8.49□□□□□ -1.05
CBX3-206ENST00000481057 CNOT6Q9ULM6 557 aaKnown RBP8.49□□□□□ -1.05
CBX3-206ENST00000481057 B3GALT1Q9Y5Z6 326 aa8.49□□□□□ -1.05
CBX3-206ENST00000481057 PTPDC1A2A3K4 754 aa8.48□□□□□ -1.05
CBX3-206ENST00000481057 SCDO00767 359 aa8.48□□□□□ -1.05
CBX3-206ENST00000481057 C4BPAP04003 597 aaKnown RBP8.48□□□□□ -1.05
CBX3-206ENST00000481057 PLA2G1BP04054 148 aaKnown RBP8.48□□□□□ -1.05
CBX3-206ENST00000481057 ITGB8P26012 769 aa8.48□□□□□ -1.05
CBX3-206ENST00000481057 STAT3P40763 770 aa8.48□□□□□ -1.05
CBX3-206ENST00000481057 LINC00310P59036 64 aa8.48□□□□□ -1.05
CBX3-206ENST00000481057 KCNA10Q16322 511 aa8.48□□□□□ -1.05
CBX3-206ENST00000481057 PROSER1Q86XN7 944 aa8.48□□□□□ -1.05
CBX3-206ENST00000481057 CNBD1Q8NA66 436 aa8.48□□□□□ -1.05
CBX3-206ENST00000481057 DLG3Q92796 817 aa8.48□□□□□ -1.05
CBX3-206ENST00000481057 NOX5Q96PH1 765 aa8.48□□□□□ -1.05
CBX3-206ENST00000481057 SYT3Q9BQG1 590 aa8.48□□□□□ -1.05
CBX3-206ENST00000481057 GORASP1Q9BQQ3 440 aa8.48□□□□□ -1.05
CBX3-206ENST00000481057 TMX1Q9H3N1 280 aa8.48□□□□□ -1.05
CBX3-206ENST00000481057 PCDH18Q9HCL0 1135 aa8.48□□□□□ -1.05
CBX3-206ENST00000481057 KCTD3Q9Y597 815 aa8.48□□□□□ -1.05
CBX3-206ENST00000481057 COL2A1P02458 1487 aaPredicted RBP8.48□□□□□ -1.05
CBX3-206ENST00000481057 SNED1Q8TER0 1413 aa8.47□□□□□ -1.05
CBX3-206ENST00000481057 VIL1P09327 827 aaKnown RBP8.47□□□□□ -1.05
CBX3-206ENST00000481057 DSG1Q02413 1049 aa8.47□□□□□ -1.05
CBX3-206ENST00000481057 ARHGEF6Q15052 776 aa8.47□□□□□ -1.05
CBX3-206ENST00000481057 SKOR2Q2VWA4 1001 aaPredicted RBP8.47□□□□□ -1.05
CBX3-206ENST00000481057 TTYH1Q9H313 450 aaPredicted RBP8.47□□□□□ -1.05
CBX3-206ENST00000481057 KCNH7Q9NS40 1196 aa8.47□□□□□ -1.05
CBX3-206ENST00000481057 THEGQ9P2T0 379 aa8.47□□□□□ -1.05
CBX3-206ENST00000481057 WASF3Q9UPY6 502 aa8.47□□□□□ -1.05
CBX3-206ENST00000481057 SETXQ7Z333 2677 aaKnown RBP8.47□□□□□ -1.05
CBX3-206ENST00000481057 COL15A1P39059 1388 aa8.47□□□□□ -1.05
CBX3-206ENST00000481057 C5orf42Q9H799 3197 aa8.47□□□□□ -1.05
CBX3-206ENST00000481057 ZNF646O15015 1829 aaPredicted RBP8.46□□□□□ -1.06
CBX3-206ENST00000481057 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.46□□□□□ -1.06
CBX3-206ENST00000481057 ZNF891A8MT65 544 aaPredicted RBP8.46□□□□□ -1.06
CBX3-206ENST00000481057 NPIPB6E9PJ23 425 aa8.46□□□□□ -1.06
CBX3-206ENST00000481057 RFXAPO00287 272 aa8.46□□□□□ -1.06
CBX3-206ENST00000481057 HIP1RO75146 1068 aa8.46□□□□□ -1.06
CBX3-206ENST00000481057 F2P00734 622 aa8.46□□□□□ -1.06
CBX3-206ENST00000481057 ITGA1P56199 1179 aa8.46□□□□□ -1.06
CBX3-206ENST00000481057 CRHR2Q13324 411 aa8.46□□□□□ -1.06
CBX3-206ENST00000481057 TBC1D10BQ4KMP7 808 aaPredicted RBP8.46□□□□□ -1.06
CBX3-206ENST00000481057 CD276Q5ZPR3 534 aa8.46□□□□□ -1.06
CBX3-206ENST00000481057 CREB3L3Q68CJ9 461 aa8.46□□□□□ -1.06
CBX3-206ENST00000481057 CNKSR3Q6P9H4 555 aa8.46□□□□□ -1.06
CBX3-206ENST00000481057 FAM177A1Q8N128 213 aaPredicted RBP8.46□□□□□ -1.06
CBX3-206ENST00000481057 CHAC2Q8WUX2 184 aa8.46□□□□□ -1.06
CBX3-206ENST00000481057 LEO1Q8WVC0 666 aaPredicted RBP8.46□□□□□ -1.06
CBX3-206ENST00000481057 CAAP1Q9H8G2 361 aa8.46□□□□□ -1.06
CBX3-206ENST00000481057 RBPJLQ9UBG7 517 aa8.46□□□□□ -1.06
CBX3-206ENST00000481057 PMF1-BGLAPU3KQ54 211 aa8.46□□□□□ -1.06
CBX3-206ENST00000481057 ALPK3Q96L96 1907 aa8.45□□□□□ -1.06
CBX3-206ENST00000481057 PRAMEF25A6NGN4 478 aa8.45□□□□□ -1.06
CBX3-206ENST00000481057 GAS7O60861 476 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms