RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 TARS2Q9BW92 718 aaKnown RBP17.3■□□□□ 0.36
COL1A1-204ENST00000474644 STRA6Q9BX79 667 aa17.3■□□□□ 0.36
COL1A1-204ENST00000474644 EIF2AQ9BY44 585 aaKnown RBP17.3■□□□□ 0.36
COL1A1-204ENST00000474644 ELAC1Q9H777 363 aaKnown RBP17.3■□□□□ 0.36
COL1A1-204ENST00000474644 TMEM161AQ9NX61 479 aa17.3■□□□□ 0.36
COL1A1-204ENST00000474644 COL4A6Q14031 1691 aa17.29■□□□□ 0.36
COL1A1-204ENST00000474644 GCNT3O95395 438 aa17.29■□□□□ 0.36
COL1A1-204ENST00000474644 NPTXRO95502 500 aa17.29■□□□□ 0.36
COL1A1-204ENST00000474644 RPN1P04843 607 aaKnown RBP17.29■□□□□ 0.36
COL1A1-204ENST00000474644 STAG3L1P0CL83 205 aa17.29■□□□□ 0.36
COL1A1-204ENST00000474644 RABGGTBP53611 331 aa17.29■□□□□ 0.36
COL1A1-204ENST00000474644 SMAD3P84022 425 aaKnown RBP17.29■□□□□ 0.36
COL1A1-204ENST00000474644 PNOCQ13519 176 aa17.29■□□□□ 0.36
COL1A1-204ENST00000474644 EEF1DP3Q658K8 133 aa17.29■□□□□ 0.36
COL1A1-204ENST00000474644 ZNF598Q86UK7 904 aaKnown RBP17.29■□□□□ 0.36
COL1A1-204ENST00000474644 RNF169Q8NCN4 708 aa17.29■□□□□ 0.36
COL1A1-204ENST00000474644 GLIS3Q8NEA6 775 aa17.29■□□□□ 0.36
COL1A1-204ENST00000474644 HVCN1Q96D96 273 aa17.29■□□□□ 0.36
COL1A1-204ENST00000474644 ACO2Q99798 780 aaKnown RBP17.29■□□□□ 0.36
COL1A1-204ENST00000474644 ZBED2Q9BTP6 218 aa17.29■□□□□ 0.36
COL1A1-204ENST00000474644 PBX4Q9BYU1 374 aa17.29■□□□□ 0.36
COL1A1-204ENST00000474644 RC3H2Q9HBD1 1191 aaKnown RBP17.29■□□□□ 0.36
COL1A1-204ENST00000474644 EXOC1Q9NV70 894 aa17.29■□□□□ 0.36
COL1A1-204ENST00000474644 LRFN2Q9ULH4 789 aa17.29■□□□□ 0.36
COL1A1-204ENST00000474644 TNFSF13BQ9Y275 285 aa17.29■□□□□ 0.36
COL1A1-204ENST00000474644 PCDHB2Q9Y5E7 798 aa17.29■□□□□ 0.36
COL1A1-204ENST00000474644 GOLGA6L22H0YM25 854 aa17.28■□□□□ 0.36
COL1A1-204ENST00000474644 SOX1O00570 391 aaPredicted RBP17.28■□□□□ 0.36
COL1A1-204ENST00000474644 TLL1O43897 1013 aa17.28■□□□□ 0.36
COL1A1-204ENST00000474644 ZNF623O75123 536 aa17.28■□□□□ 0.36
COL1A1-204ENST00000474644 PIGRP01833 764 aa17.28■□□□□ 0.36
COL1A1-204ENST00000474644 SKIP12755 728 aa17.28■□□□□ 0.36
COL1A1-204ENST00000474644 PBX2P40425 430 aa17.28■□□□□ 0.36
COL1A1-204ENST00000474644 HTRA4P83105 476 aaPredicted RBP17.28■□□□□ 0.36
COL1A1-204ENST00000474644 ALCAMQ13740 583 aa17.28■□□□□ 0.36
COL1A1-204ENST00000474644 KMT5BQ4FZB7 885 aa17.28■□□□□ 0.36
COL1A1-204ENST00000474644 L1TD1Q5T7N2 865 aaKnown RBP17.28■□□□□ 0.36
COL1A1-204ENST00000474644 ZPBP2Q6X784 338 aa17.28■□□□□ 0.36
COL1A1-204ENST00000474644 SMG8Q8ND04 991 aaKnown RBP17.28■□□□□ 0.36
COL1A1-204ENST00000474644 BICD1Q96G01 975 aa17.28■□□□□ 0.36
COL1A1-204ENST00000474644 PTPRHQ9HD43 1115 aa17.28■□□□□ 0.36
COL1A1-204ENST00000474644 RNF216Q9NWF9 866 aaPredicted RBP17.28■□□□□ 0.36
COL1A1-204ENST00000474644 YBX2Q9Y2T7 364 aaKnown RBP17.28■□□□□ 0.36
COL1A1-204ENST00000474644 IPPQ9Y573 584 aa17.28■□□□□ 0.36
COL1A1-204ENST00000474644 PCDHB7Q9Y5E2 793 aa17.28■□□□□ 0.36
COL1A1-204ENST00000474644 PCDHA11Q9Y5I1 949 aa17.28■□□□□ 0.36
COL1A1-204ENST00000474644 TTC3P53804 2025 aa17.28■□□□□ 0.36
COL1A1-204ENST00000474644 ABLIM1O14639 778 aa17.27■□□□□ 0.36
COL1A1-204ENST00000474644 HNRNPDLO14979 420 aaKnown RBP17.27■□□□□ 0.36
COL1A1-204ENST00000474644 DGKIO75912 1065 aa17.27■□□□□ 0.36
COL1A1-204ENST00000474644 EOMESO95936 686 aa17.27■□□□□ 0.36
COL1A1-204ENST00000474644 FGFR1P11362 822 aa17.27■□□□□ 0.36
COL1A1-204ENST00000474644 MYOGP15173 224 aa17.27■□□□□ 0.36
COL1A1-204ENST00000474644 PROZP22891 400 aa17.27■□□□□ 0.36
COL1A1-204ENST00000474644 GATMP50440 423 aa17.27■□□□□ 0.36
COL1A1-204ENST00000474644 KCNA1Q09470 495 aa17.27■□□□□ 0.36
COL1A1-204ENST00000474644 RAB30Q15771 203 aa17.27■□□□□ 0.36
COL1A1-204ENST00000474644 DCAF4L1Q3SXM0 396 aa17.27■□□□□ 0.36
COL1A1-204ENST00000474644 ZNF568Q3ZCX4 644 aa17.27■□□□□ 0.36
COL1A1-204ENST00000474644 MRPL10Q7Z7H8 261 aaKnown RBP17.27■□□□□ 0.36
COL1A1-204ENST00000474644 ELOA2Q8IYF1 753 aaPredicted RBP17.27■□□□□ 0.36
COL1A1-204ENST00000474644 LPPQ93052 612 aa17.27■□□□□ 0.36
COL1A1-204ENST00000474644 YME1L1Q96TA2 773 aa17.27■□□□□ 0.36
COL1A1-204ENST00000474644 RAD9AQ99638 391 aa17.27■□□□□ 0.36
COL1A1-204ENST00000474644 ADPGKQ9BRR6 497 aa17.27■□□□□ 0.36
COL1A1-204ENST00000474644 TRIM6Q9C030 488 aaPredicted RBP17.27■□□□□ 0.36
COL1A1-204ENST00000474644 CDT1Q9H211 546 aa17.27■□□□□ 0.36
COL1A1-204ENST00000474644 NXF3Q9H4D5 531 aaKnown RBP17.27■□□□□ 0.36
COL1A1-204ENST00000474644 RNF19AQ9NV58 838 aa17.27■□□□□ 0.36
COL1A1-204ENST00000474644 ANKFY1Q9P2R3 1169 aa17.27■□□□□ 0.36
COL1A1-204ENST00000474644 PCDHB13Q9Y5F0 798 aa17.27■□□□□ 0.36
COL1A1-204ENST00000474644 LCHNA4D1U4 455 aa17.26■□□□□ 0.35
COL1A1-204ENST00000474644 MEIS3P2A8K0S8 358 aa17.26■□□□□ 0.35
COL1A1-204ENST00000474644 TOM1L1O75674 476 aa17.26■□□□□ 0.35
COL1A1-204ENST00000474644 DNAJB2P25686 324 aa17.26■□□□□ 0.35
COL1A1-204ENST00000474644 LIG4P49917 911 aa17.26■□□□□ 0.35
COL1A1-204ENST00000474644 SLC39A4Q6P5W5 647 aa17.26■□□□□ 0.35
COL1A1-204ENST00000474644 MPZL3Q6UWV2 235 aa17.26■□□□□ 0.35
COL1A1-204ENST00000474644 STXBP4Q6ZWJ1 553 aa17.26■□□□□ 0.35
COL1A1-204ENST00000474644 EPM2AIP1Q7L775 607 aaPredicted RBP17.26■□□□□ 0.35
COL1A1-204ENST00000474644 SP7Q8TDD2 431 aaPredicted RBP17.26■□□□□ 0.35
COL1A1-204ENST00000474644 ERCC4Q92889 916 aaPredicted RBP17.26■□□□□ 0.35
COL1A1-204ENST00000474644 ZNF689Q96CS4 500 aaPredicted RBP17.26■□□□□ 0.35
COL1A1-204ENST00000474644 ACCSQ96QU6 501 aa17.26■□□□□ 0.35
COL1A1-204ENST00000474644 IKZF4Q9H2S9 585 aa17.26■□□□□ 0.35
COL1A1-204ENST00000474644 SLC39A2Q9NP94 309 aa17.26■□□□□ 0.35
COL1A1-204ENST00000474644 HOOK1Q9UJC3 728 aaKnown RBP17.26■□□□□ 0.35
COL1A1-204ENST00000474644 HES2Q9Y543 173 aa17.26■□□□□ 0.35
COL1A1-204ENST00000474644 INSL6Q9Y581 213 aa17.26■□□□□ 0.35
COL1A1-204ENST00000474644 ZMYM2Q9UBW7 1377 aa17.26■□□□□ 0.35
COL1A1-204ENST00000474644 COL6A3P12111 3177 aa17.26■□□□□ 0.35
COL1A1-204ENST00000474644 TISP43B9A030 160 aa17.25■□□□□ 0.35
COL1A1-204ENST00000474644 EIF3DO15371 548 aaKnown RBP eCLIP17.25■□□□□ 0.35
COL1A1-204ENST00000474644 HOXA2O43364 376 aa17.25■□□□□ 0.35
COL1A1-204ENST00000474644 PRPF6O94906 941 aaKnown RBP17.25■□□□□ 0.35
COL1A1-204ENST00000474644 RHOBTB3O94955 611 aa17.25■□□□□ 0.35
COL1A1-204ENST00000474644 CA3P07451 260 aa17.25■□□□□ 0.35
COL1A1-204ENST00000474644 MCF2P10911 925 aa17.25■□□□□ 0.35
COL1A1-204ENST00000474644 STK4Q13043 487 aa17.25■□□□□ 0.35
COL1A1-204ENST00000474644 KCNB1Q14721 858 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms