RNA–Protein interactions for RNA: ENST00000462181.1

CALD1-213, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 188 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-213ENST00000462181 PCDHGA2Q9Y5H1 932 aa7.4□□□□□ -1.22
CALD1-213ENST00000462181 NCANO14594 1321 aa7.39□□□□□ -1.23
CALD1-213ENST00000462181 KLHL33A6NCF5 533 aa7.39□□□□□ -1.23
CALD1-213ENST00000462181 XPOTO43592 962 aaKnown RBP7.39□□□□□ -1.23
CALD1-213ENST00000462181 RBP3P10745 1247 aa7.39□□□□□ -1.23
CALD1-213ENST00000462181 GYPEP15421 78 aa7.39□□□□□ -1.23
CALD1-213ENST00000462181 ACO1P21399 889 aaKnown RBP7.39□□□□□ -1.23
CALD1-213ENST00000462181 CCND1P24385 295 aa7.39□□□□□ -1.23
CALD1-213ENST00000462181 ADSLP30566 484 aaPredicted RBP7.39□□□□□ -1.23
CALD1-213ENST00000462181 SELENOPP49908 381 aa7.39□□□□□ -1.23
CALD1-213ENST00000462181 ADAM17P78536 824 aa7.39□□□□□ -1.23
CALD1-213ENST00000462181 MALLQ13021 153 aa7.39□□□□□ -1.23
CALD1-213ENST00000462181 PTPN21Q16825 1174 aa7.39□□□□□ -1.23
CALD1-213ENST00000462181 FKBP15Q5T1M5 1219 aa7.39□□□□□ -1.23
CALD1-213ENST00000462181 PNMA8AQ86V59 439 aaPredicted RBP7.39□□□□□ -1.23
CALD1-213ENST00000462181 DVL3Q92997 716 aaPredicted RBP7.39□□□□□ -1.23
CALD1-213ENST00000462181 CDK5RAP1Q96SZ6 601 aaKnown RBP7.39□□□□□ -1.23
CALD1-213ENST00000462181 ZNF277Q9NRM2 450 aaPredicted RBP7.39□□□□□ -1.23
CALD1-213ENST00000462181 RBM12Q9NTZ6 932 aaKnown RBP7.39□□□□□ -1.23
CALD1-213ENST00000462181 SH3BP1Q9Y3L3 701 aa7.39□□□□□ -1.23
CALD1-213ENST00000462181 SPEF1Q9Y4P9 236 aa7.39□□□□□ -1.23
CALD1-213ENST00000462181 TNKSO95271 1327 aa7.38□□□□□ -1.23
CALD1-213ENST00000462181 GSPT1P15170 499 aaKnown RBP7.38□□□□□ -1.23
CALD1-213ENST00000462181 EXOSC10Q01780 885 aaKnown RBP7.38□□□□□ -1.23
CALD1-213ENST00000462181 GJC2Q5T442 439 aaPredicted RBP7.38□□□□□ -1.23
CALD1-213ENST00000462181 MFSD5Q6N075 450 aa7.38□□□□□ -1.23
CALD1-213ENST00000462181 Q6ZSN1 163 aa7.38□□□□□ -1.23
CALD1-213ENST00000462181 PPM1NQ8N819 430 aa7.38□□□□□ -1.23
CALD1-213ENST00000462181 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.38□□□□□ -1.23
CALD1-213ENST00000462181 EDAQ92838 391 aa7.38□□□□□ -1.23
CALD1-213ENST00000462181 ZNF512Q96ME7 567 aaPredicted RBP7.38□□□□□ -1.23
CALD1-213ENST00000462181 CDC5LQ99459 802 aaKnown RBP7.38□□□□□ -1.23
CALD1-213ENST00000462181 JAG2Q9Y219 1238 aa7.38□□□□□ -1.23
CALD1-213ENST00000462181 MUSKO15146 869 aa7.37□□□□□ -1.23
CALD1-213ENST00000462181 GASTP01350 101 aa7.37□□□□□ -1.23
CALD1-213ENST00000462181 GZMKP49863 264 aa7.37□□□□□ -1.23
CALD1-213ENST00000462181 PRKD1Q15139 912 aaPredicted RBP7.37□□□□□ -1.23
CALD1-213ENST00000462181 NOMO1Q15155 1222 aa7.37□□□□□ -1.23
CALD1-213ENST00000462181 PCBP2Q15366 365 aaKnown RBP eCLIP7.37□□□□□ -1.23
CALD1-213ENST00000462181 ELAVL1Q15717 326 aaKnown RBP7.37□□□□□ -1.23
CALD1-213ENST00000462181 MAMDC4Q6UXC1 1216 aa7.37□□□□□ -1.23
CALD1-213ENST00000462181 PALM2Q8IXS6 379 aa7.37□□□□□ -1.23
CALD1-213ENST00000462181 ANKRD35Q8N283 1001 aa7.37□□□□□ -1.23
CALD1-213ENST00000462181 ZNF808Q8N4W9 903 aaPredicted RBP7.37□□□□□ -1.23
CALD1-213ENST00000462181 ZNF480Q8WV37 535 aa7.37□□□□□ -1.23
CALD1-213ENST00000462181 JADE3Q92613 823 aa7.37□□□□□ -1.23
CALD1-213ENST00000462181 IL17RAQ96F46 866 aa7.37□□□□□ -1.23
CALD1-213ENST00000462181 ENKD1Q9H0I2 346 aa7.37□□□□□ -1.23
CALD1-213ENST00000462181 GPRC5DQ9NZD1 345 aa7.37□□□□□ -1.23
CALD1-213ENST00000462181 SCOCQ9UIL1 159 aa7.37□□□□□ -1.23
CALD1-213ENST00000462181 DNM3Q9UQ16 869 aa7.37□□□□□ -1.23
CALD1-213ENST00000462181 CAPN14A8MX76 684 aa7.36□□□□□ -1.23
CALD1-213ENST00000462181 HOXA3O43365 443 aaPredicted RBP7.36□□□□□ -1.23
CALD1-213ENST00000462181 PCDHGA12O60330 932 aa7.36□□□□□ -1.23
CALD1-213ENST00000462181 MFAP3LO75121 409 aa7.36□□□□□ -1.23
CALD1-213ENST00000462181 ITGA10O75578 1167 aa7.36□□□□□ -1.23
CALD1-213ENST00000462181 ZNF20P17024 532 aa7.36□□□□□ -1.23
CALD1-213ENST00000462181 HIBADHP31937 336 aaKnown RBP7.36□□□□□ -1.23
CALD1-213ENST00000462181 MCAMP43121 646 aa7.36□□□□□ -1.23
CALD1-213ENST00000462181 PER3P56645 1201 aa7.36□□□□□ -1.23
CALD1-213ENST00000462181 APBA1Q02410 837 aa7.36□□□□□ -1.23
CALD1-213ENST00000462181 PDZD4Q76G19 769 aaPredicted RBP7.36□□□□□ -1.23
CALD1-213ENST00000462181 GSPT2Q8IYD1 628 aaKnown RBP7.36□□□□□ -1.23
CALD1-213ENST00000462181 MIEF2Q96C03 454 aa7.36□□□□□ -1.23
CALD1-213ENST00000462181 CEP89Q96ST8 783 aa7.36□□□□□ -1.23
CALD1-213ENST00000462181 C1QTNF3Q9BXJ4 246 aa7.36□□□□□ -1.23
CALD1-213ENST00000462181 DMRT3Q9NQL9 472 aa7.36□□□□□ -1.23
CALD1-213ENST00000462181 TYW1Q9NV66 732 aaKnown RBP7.36□□□□□ -1.23
CALD1-213ENST00000462181 DDX56Q9NY93 547 aaKnown RBP7.36□□□□□ -1.23
CALD1-213ENST00000462181 PCDHGA9Q9Y5G4 932 aaKnown RBP7.36□□□□□ -1.23
CALD1-213ENST00000462181 PCDHGA8Q9Y5G5 932 aa7.36□□□□□ -1.23
CALD1-213ENST00000462181 PCDHGA7Q9Y5G6 932 aa7.36□□□□□ -1.23
CALD1-213ENST00000462181 PCDHGA6Q9Y5G7 932 aa7.36□□□□□ -1.23
CALD1-213ENST00000462181 PCDHGA3Q9Y5H0 932 aa7.36□□□□□ -1.23
CALD1-213ENST00000462181 CYP27B1O15528 508 aa7.35□□□□□ -1.23
CALD1-213ENST00000462181 STC2O76061 302 aa7.35□□□□□ -1.23
CALD1-213ENST00000462181 ADRB1P08588 477 aa7.35□□□□□ -1.23
CALD1-213ENST00000462181 GNAT2P19087 354 aa7.35□□□□□ -1.23
CALD1-213ENST00000462181 ECHS1P30084 290 aa7.35□□□□□ -1.23
CALD1-213ENST00000462181 CRHR1P34998 444 aa7.35□□□□□ -1.23
CALD1-213ENST00000462181 BUD31P41223 144 aaPredicted RBP7.35□□□□□ -1.23
CALD1-213ENST00000462181 KRT85P78386 507 aa7.35□□□□□ -1.23
CALD1-213ENST00000462181 MRPL49Q13405 166 aaKnown RBP7.35□□□□□ -1.23
CALD1-213ENST00000462181 MST1LQ2TV78 715 aa7.35□□□□□ -1.23
CALD1-213ENST00000462181 UHRF1Q96T88 793 aaPredicted RBP7.35□□□□□ -1.23
CALD1-213ENST00000462181 GPR20Q99678 358 aa7.35□□□□□ -1.23
CALD1-213ENST00000462181 SLC13A1Q9BZW2 595 aa7.35□□□□□ -1.23
CALD1-213ENST00000462181 HECAQ9UBI9 543 aaPredicted RBP7.35□□□□□ -1.23
CALD1-213ENST00000462181 KRTAP4-8A0A0G2JLE6 195 aa7.34□□□□□ -1.23
CALD1-213ENST00000462181 NDUFS2O75306 463 aa7.34□□□□□ -1.23
CALD1-213ENST00000462181 IPO13O94829 963 aaKnown RBP7.34□□□□□ -1.23
CALD1-213ENST00000462181 PPP3CAQ08209 521 aa7.34□□□□□ -1.23
CALD1-213ENST00000462181 FAM214AQ32MH5 1076 aa7.34□□□□□ -1.23
CALD1-213ENST00000462181 EFCAB2Q5VUJ9 269 aa7.34□□□□□ -1.23
CALD1-213ENST00000462181 SPTY2D1Q68D10 685 aaPredicted RBP7.34□□□□□ -1.23
CALD1-213ENST00000462181 ELOA2Q8IYF1 753 aaPredicted RBP7.34□□□□□ -1.23
CALD1-213ENST00000462181 THEMISQ8N1K5 641 aaPredicted RBP7.34□□□□□ -1.23
CALD1-213ENST00000462181 MDM1Q8TC05 714 aa7.34□□□□□ -1.23
CALD1-213ENST00000462181 BORCS6Q96GS4 357 aa7.34□□□□□ -1.23
CALD1-213ENST00000462181 KRTAP3-1Q9BYR8 98 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms