RNA–Protein interactions for RNA: ENST00000457212.5

FAM3A-217, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-217ENST00000457212 GPT2Q8TD30 523 aa22.56■■□□□ 1.2
FAM3A-217ENST00000457212 HPS3Q969F9 1004 aa22.56■■□□□ 1.2
FAM3A-217ENST00000457212 ACCSQ96QU6 501 aa22.56■■□□□ 1.2
FAM3A-217ENST00000457212 ADPGKQ9BRR6 497 aa22.56■■□□□ 1.2
FAM3A-217ENST00000457212 TARS2Q9BW92 718 aaKnown RBP22.56■■□□□ 1.2
FAM3A-217ENST00000457212 GTPBP4Q9BZE4 634 aaKnown RBP22.56■■□□□ 1.2
FAM3A-217ENST00000457212 CLSTN2Q9H4D0 955 aa22.56■■□□□ 1.2
FAM3A-217ENST00000457212 PDZD7Q9H5P4 517 aa22.56■■□□□ 1.2
FAM3A-217ENST00000457212 ELAC1Q9H777 363 aaKnown RBP22.56■■□□□ 1.2
FAM3A-217ENST00000457212 FAM105AQ9NUU6 356 aa22.56■■□□□ 1.2
FAM3A-217ENST00000457212 PCDHA5Q9Y5H7 936 aa22.56■■□□□ 1.2
FAM3A-217ENST00000457212 TTC3P53804 2025 aa22.56■■□□□ 1.2
FAM3A-217ENST00000457212 UBE4BO95155 1302 aa22.56■■□□□ 1.2
FAM3A-217ENST00000457212 TTLL13PA6NNM8 815 aa22.55■■□□□ 1.2
FAM3A-217ENST00000457212 ZNF623O75123 536 aa22.55■■□□□ 1.2
FAM3A-217ENST00000457212 DEFB103AP81534 67 aa22.55■■□□□ 1.2
FAM3A-217ENST00000457212 UBXN11Q5T124 520 aa22.55■■□□□ 1.2
FAM3A-217ENST00000457212 EPM2AIP1Q7L775 607 aaPredicted RBP22.55■■□□□ 1.2
FAM3A-217ENST00000457212 ECHDC2Q86YB7 292 aa22.55■■□□□ 1.2
FAM3A-217ENST00000457212 NPAS4Q8IUM7 802 aa22.55■■□□□ 1.2
FAM3A-217ENST00000457212 MYOCDQ8IZQ8 938 aa22.55■■□□□ 1.2
FAM3A-217ENST00000457212 TOP1MTQ969P6 601 aa22.55■■□□□ 1.2
FAM3A-217ENST00000457212 BICD1Q96G01 975 aa22.55■■□□□ 1.2
FAM3A-217ENST00000457212 FGFBP2Q9BYJ0 223 aa22.55■■□□□ 1.2
FAM3A-217ENST00000457212 TMEM206Q9H813 350 aa22.55■■□□□ 1.2
FAM3A-217ENST00000457212 SLC39A2Q9NP94 309 aa22.55■■□□□ 1.2
FAM3A-217ENST00000457212 COLQQ9Y215 455 aaPredicted RBP22.55■■□□□ 1.2
FAM3A-217ENST00000457212 TOM1L1O75674 476 aa22.54■■□□□ 1.2
FAM3A-217ENST00000457212 EOMESO95936 686 aa22.54■■□□□ 1.2
FAM3A-217ENST00000457212 ATP2A2P16615 1042 aaKnown RBP22.54■■□□□ 1.2
FAM3A-217ENST00000457212 LIG4P49917 911 aa22.54■■□□□ 1.2
FAM3A-217ENST00000457212 DCAF4L1Q3SXM0 396 aa22.54■■□□□ 1.2
FAM3A-217ENST00000457212 ZNF507Q8TCN5 953 aa22.54■■□□□ 1.2
FAM3A-217ENST00000457212 TRIM6Q9C030 488 aaPredicted RBP22.54■■□□□ 1.2
FAM3A-217ENST00000457212 PTPRHQ9HD43 1115 aa22.54■■□□□ 1.2
FAM3A-217ENST00000457212 TMEM161AQ9NX61 479 aa22.54■■□□□ 1.2
FAM3A-217ENST00000457212 LRFN2Q9ULH4 789 aa22.54■■□□□ 1.2
FAM3A-217ENST00000457212 USP20Q9Y2K6 914 aa22.54■■□□□ 1.2
FAM3A-217ENST00000457212 PCDHB2Q9Y5E7 798 aa22.54■■□□□ 1.2
FAM3A-217ENST00000457212 HNRNPDLO14979 420 aaKnown RBP22.53■■□□□ 1.2
FAM3A-217ENST00000457212 PRPF6O94906 941 aaKnown RBP22.53■■□□□ 1.2
FAM3A-217ENST00000457212 PROZP22891 400 aa22.53■■□□□ 1.2
FAM3A-217ENST00000457212 STK4Q13043 487 aa22.53■■□□□ 1.2
FAM3A-217ENST00000457212 BMT2Q1RMZ1 405 aa22.53■■□□□ 1.2
FAM3A-217ENST00000457212 EEF1DP3Q658K8 133 aa22.53■■□□□ 1.2
FAM3A-217ENST00000457212 MRPL10Q7Z7H8 261 aaKnown RBP22.53■■□□□ 1.2
FAM3A-217ENST00000457212 HACE1Q8IYU2 909 aa22.53■■□□□ 1.2
FAM3A-217ENST00000457212 CRIPAKQ8N1N5 446 aa22.53■■□□□ 1.2
FAM3A-217ENST00000457212 PGBD4Q96DM1 585 aa22.53■■□□□ 1.2
FAM3A-217ENST00000457212 TCHPQ9BT92 498 aa22.53■■□□□ 1.2
FAM3A-217ENST00000457212 NUP62CLQ9H1M0 184 aa22.53■■□□□ 1.2
FAM3A-217ENST00000457212 PCDHB7Q9Y5E2 793 aa22.53■■□□□ 1.2
FAM3A-217ENST00000457212 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.52■■□□□ 1.2
FAM3A-217ENST00000457212 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.52■■□□□ 1.2
FAM3A-217ENST00000457212 KIF20AO95235 890 aa22.52■■□□□ 1.2
FAM3A-217ENST00000457212 NPTXRO95502 500 aa22.52■■□□□ 1.2
FAM3A-217ENST00000457212 CAMK4Q16566 473 aa22.52■■□□□ 1.2
FAM3A-217ENST00000457212 ZNF568Q3ZCX4 644 aa22.52■■□□□ 1.2
FAM3A-217ENST00000457212 SLFN12LQ6IEE8 588 aa22.52■■□□□ 1.2
FAM3A-217ENST00000457212 MPZL3Q6UWV2 235 aa22.52■■□□□ 1.2
FAM3A-217ENST00000457212 ZNF598Q86UK7 904 aaKnown RBP22.52■■□□□ 1.2
FAM3A-217ENST00000457212 CDR2LQ86X02 465 aaPredicted RBP22.52■■□□□ 1.2
FAM3A-217ENST00000457212 HERC6Q8IVU3 1022 aa22.52■■□□□ 1.2
FAM3A-217ENST00000457212 SYCP3Q8IZU3 236 aa22.52■■□□□ 1.2
FAM3A-217ENST00000457212 KIAA0895Q8NCT3 520 aa22.52■■□□□ 1.2
FAM3A-217ENST00000457212 GLIS3Q8NEA6 775 aa22.52■■□□□ 1.2
FAM3A-217ENST00000457212 SCFD1Q8WVM8 642 aa22.52■■□□□ 1.2
FAM3A-217ENST00000457212 EIF2AQ9BY44 585 aaKnown RBP22.52■■□□□ 1.2
FAM3A-217ENST00000457212 PTPRSQ13332 1948 aa22.51■■□□□ 1.19
FAM3A-217ENST00000457212 CLDN3O15551 220 aa22.51■■□□□ 1.19
FAM3A-217ENST00000457212 HOXA2O43364 376 aa22.51■■□□□ 1.19
FAM3A-217ENST00000457212 GJB5O95377 273 aa22.51■■□□□ 1.19
FAM3A-217ENST00000457212 MCF2P10911 925 aa22.51■■□□□ 1.19
FAM3A-217ENST00000457212 KCNA1Q09470 495 aa22.51■■□□□ 1.19
FAM3A-217ENST00000457212 RSPH1Q8WYR4 309 aa22.51■■□□□ 1.19
FAM3A-217ENST00000457212 ERCC4Q92889 916 aaPredicted RBP22.51■■□□□ 1.19
FAM3A-217ENST00000457212 KIAA1468Q9P260 1216 aa22.51■■□□□ 1.19
FAM3A-217ENST00000457212 IPPQ9Y573 584 aa22.51■■□□□ 1.19
FAM3A-217ENST00000457212 ABLIM1O14639 778 aa22.5■■□□□ 1.19
FAM3A-217ENST00000457212 SNRPFP62306 86 aaKnown RBP22.5■■□□□ 1.19
FAM3A-217ENST00000457212 MCL1Q07820 350 aa22.5■■□□□ 1.19
FAM3A-217ENST00000457212 ZNF658Q5TYW1 1059 aaPredicted RBP22.5■■□□□ 1.19
FAM3A-217ENST00000457212 SMG8Q8ND04 991 aaKnown RBP22.5■■□□□ 1.19
FAM3A-217ENST00000457212 ZBED2Q9BTP6 218 aa22.5■■□□□ 1.19
FAM3A-217ENST00000457212 CDT1Q9H211 546 aa22.5■■□□□ 1.19
FAM3A-217ENST00000457212 UBN1Q9NPG3 1134 aa22.5■■□□□ 1.19
FAM3A-217ENST00000457212 ANKFY1Q9P2R3 1169 aa22.5■■□□□ 1.19
FAM3A-217ENST00000457212 STYXL1Q9Y6J8 313 aa22.5■■□□□ 1.19
FAM3A-217ENST00000457212 UPP2O95045 317 aa22.49■■□□□ 1.19
FAM3A-217ENST00000457212 ITGA4P13612 1032 aa22.49■■□□□ 1.19
FAM3A-217ENST00000457212 ATF7P17544 494 aaPredicted RBP22.49■■□□□ 1.19
FAM3A-217ENST00000457212 HOXD13P35453 343 aa22.49■■□□□ 1.19
FAM3A-217ENST00000457212 MATR3P43243 847 aaKnown RBP eCLIP22.49■■□□□ 1.19
FAM3A-217ENST00000457212 NOLC1Q14978 699 aaKnown RBP eCLIP22.49■■□□□ 1.19
FAM3A-217ENST00000457212 KNOP1Q1ED39 458 aaKnown RBP22.49■■□□□ 1.19
FAM3A-217ENST00000457212 LRIT3Q3SXY7 679 aa22.49■■□□□ 1.19
FAM3A-217ENST00000457212 TRIML1Q8N9V2 468 aa22.49■■□□□ 1.19
FAM3A-217ENST00000457212 RNF169Q8NCN4 708 aa22.49■■□□□ 1.19
FAM3A-217ENST00000457212 ZBTB45Q96K62 511 aaPredicted RBP22.49■■□□□ 1.19
FAM3A-217ENST00000457212 GBP3Q9H0R5 595 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms