RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 RWDD3Q9Y3V2 267 aa15.42■□□□□ 0.06
GTF3C3-206ENST00000448539 ARHGEF15O94989 841 aa15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 NPTXRO95502 500 aa15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 MAPTP10636 758 aaKnown RBP15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 ITGA4P13612 1032 aa15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 SYKP43405 635 aa15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 GATMP50440 423 aa15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 NCKAP1LP55160 1127 aa15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 ERVK-21P61565 698 aa15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 HERC4Q5GLZ8 1057 aaPredicted RBP15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 ATF7IP2Q5U623 682 aa15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 GLB1LQ6UWU2 654 aa15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 HAUS6Q7Z4H7 955 aa15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 CDR2LQ86X02 465 aaPredicted RBP15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 CCDC65Q8IXS2 484 aa15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 RSPH1Q8WYR4 309 aa15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 LPPQ93052 612 aa15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 BICD1Q96G01 975 aa15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 IPO9Q96P70 1041 aaKnown RBP15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 APOL6Q9BWW8 343 aa15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 EIF2AQ9BY44 585 aaKnown RBP15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 RC3H2Q9HBD1 1191 aaKnown RBP15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 UBN1Q9NPG3 1134 aa15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 PANK4Q9NVE7 773 aa15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 SEL1LQ9UBV2 794 aa15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 IPPQ9Y573 584 aa15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 PRUNE2Q8WUY3 3088 aa15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 PTPRSQ13332 1948 aa15.41■□□□□ 0.06
GTF3C3-206ENST00000448539 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 SLFN14P0C7P3 912 aa15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 FOSL2P15408 326 aa15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 ATF7P17544 494 aaPredicted RBP15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 CTNNB1P35222 781 aa15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 ASIC1P78348 528 aa15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 GRIN2CQ14957 1233 aa15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 DCAF4L1Q3SXM0 396 aa15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 NT5DC1Q5TFE4 455 aa15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 MRPL10Q7Z7H8 261 aaKnown RBP15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 SFR1Q86XK3 245 aa15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 MAFAQ8NHW3 353 aaPredicted RBP15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 URGCPQ8TCY9 931 aa15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 HELQQ8TDG4 1101 aa15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 DNAJC19Q96DA6 116 aa15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 CCDC34Q96HJ3 373 aa15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 CASD1Q96PB1 797 aa15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 GAS2L1Q99501 681 aaPredicted RBP15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 C17orf80Q9BSJ5 609 aa15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 TCHPQ9BT92 498 aa15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 MRPL9Q9BYD2 267 aaKnown RBP15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 PRDM12Q9H4Q4 367 aa15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 PDZD7Q9H5P4 517 aa15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 MRPL44Q9H9J2 332 aaKnown RBP15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 AAASQ9NRG9 546 aa15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 SERTAD1Q9UHV2 236 aa15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 USP20Q9Y2K6 914 aa15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 GBF1Q92538 1859 aa15.4■□□□□ 0.06
GTF3C3-206ENST00000448539 TTLL13PA6NNM8 815 aa15.39■□□□□ 0.05
GTF3C3-206ENST00000448539 MATR3P43243 847 aaKnown RBP eCLIP15.39■□□□□ 0.05
GTF3C3-206ENST00000448539 AFMP43652 599 aa15.39■□□□□ 0.05
GTF3C3-206ENST00000448539 NDUFA8P51970 172 aa15.39■□□□□ 0.05
GTF3C3-206ENST00000448539 CLLU1OSQ5K130 101 aa15.39■□□□□ 0.05
GTF3C3-206ENST00000448539 TMEM192Q8IY95 271 aa15.39■□□□□ 0.05
GTF3C3-206ENST00000448539 LRRC43Q8N309 656 aa15.39■□□□□ 0.05
GTF3C3-206ENST00000448539 SMG8Q8ND04 991 aaKnown RBP15.39■□□□□ 0.05
GTF3C3-206ENST00000448539 FBXO22Q8NEZ5 403 aa15.39■□□□□ 0.05
GTF3C3-206ENST00000448539 ACO2Q99798 780 aaKnown RBP15.39■□□□□ 0.05
GTF3C3-206ENST00000448539 C7orf25Q9BPX7 421 aa15.39■□□□□ 0.05
GTF3C3-206ENST00000448539 TARS2Q9BW92 718 aaKnown RBP15.39■□□□□ 0.05
GTF3C3-206ENST00000448539 TRIM9Q9C026 710 aa15.39■□□□□ 0.05
GTF3C3-206ENST00000448539 RSAD1Q9HA92 442 aa15.39■□□□□ 0.05
GTF3C3-206ENST00000448539 TYW1Q9NV66 732 aaKnown RBP15.39■□□□□ 0.05
GTF3C3-206ENST00000448539 PARP2Q9UGN5 583 aa15.39■□□□□ 0.05
GTF3C3-206ENST00000448539 HPSEQ9Y251 543 aa15.39■□□□□ 0.05
GTF3C3-206ENST00000448539 TNFSF13BQ9Y275 285 aa15.39■□□□□ 0.05
GTF3C3-206ENST00000448539 INPP5FQ9Y2H2 1132 aa15.39■□□□□ 0.05
GTF3C3-206ENST00000448539 MRPL42Q9Y6G3 142 aaKnown RBP15.39■□□□□ 0.05
GTF3C3-206ENST00000448539 FAM237AA0A1B0GTK4 181 aa15.38■□□□□ 0.05
GTF3C3-206ENST00000448539 NMT1P30419 496 aaKnown RBP15.38■□□□□ 0.05
GTF3C3-206ENST00000448539 BMPR1AP36894 532 aa15.38■□□□□ 0.05
GTF3C3-206ENST00000448539 LIG4P49917 911 aa15.38■□□□□ 0.05
GTF3C3-206ENST00000448539 RNASELQ05823 741 aaKnown RBP15.38■□□□□ 0.05
GTF3C3-206ENST00000448539 ZNF568Q3ZCX4 644 aa15.38■□□□□ 0.05
GTF3C3-206ENST00000448539 EPC2Q52LR7 807 aa15.38■□□□□ 0.05
GTF3C3-206ENST00000448539 NOMO2Q5JPE7 1267 aa15.38■□□□□ 0.05
GTF3C3-206ENST00000448539 EEF1DP3Q658K8 133 aa15.38■□□□□ 0.05
GTF3C3-206ENST00000448539 ZPBP2Q6X784 338 aa15.38■□□□□ 0.05
GTF3C3-206ENST00000448539 AGMOQ6ZNB7 445 aa15.38■□□□□ 0.05
GTF3C3-206ENST00000448539 TAS1R3Q7RTX0 852 aa15.38■□□□□ 0.05
GTF3C3-206ENST00000448539 CLP1Q92989 425 aaKnown RBP15.38■□□□□ 0.05
GTF3C3-206ENST00000448539 NXF3Q9H4D5 531 aaKnown RBP15.38■□□□□ 0.05
GTF3C3-206ENST00000448539 RNF19AQ9NV58 838 aa15.38■□□□□ 0.05
GTF3C3-206ENST00000448539 TBC1D7Q9P0N9 293 aa15.38■□□□□ 0.05
GTF3C3-206ENST00000448539 KANSL3Q9P2N6 904 aa15.38■□□□□ 0.05
GTF3C3-206ENST00000448539 TBX20Q9UMR3 447 aa15.38■□□□□ 0.05
GTF3C3-206ENST00000448539 GIT1Q9Y2X7 761 aa15.38■□□□□ 0.05
GTF3C3-206ENST00000448539 HES2Q9Y543 173 aa15.38■□□□□ 0.05
GTF3C3-206ENST00000448539 PCDHB12Q9Y5F1 795 aa15.38■□□□□ 0.05
GTF3C3-206ENST00000448539 CHD9Q3L8U1 2897 aa15.38■□□□□ 0.05
GTF3C3-206ENST00000448539 COL4A6Q14031 1691 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms