RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 SFR1Q86XK3 245 aa17.32■□□□□ 0.36
BRAT1-202ENST00000421712 CNNM3Q8NE01 707 aa17.32■□□□□ 0.36
BRAT1-202ENST00000421712 ZNF689Q96CS4 500 aaPredicted RBP17.32■□□□□ 0.36
BRAT1-202ENST00000421712 DNAJC19Q96DA6 116 aa17.32■□□□□ 0.36
BRAT1-202ENST00000421712 BICD1Q96G01 975 aa17.32■□□□□ 0.36
BRAT1-202ENST00000421712 TGS1Q96RS0 853 aaKnown RBP17.32■□□□□ 0.36
BRAT1-202ENST00000421712 TCHPQ9BT92 498 aa17.32■□□□□ 0.36
BRAT1-202ENST00000421712 MRPL44Q9H9J2 332 aaKnown RBP17.32■□□□□ 0.36
BRAT1-202ENST00000421712 TBC1D7Q9P0N9 293 aa17.32■□□□□ 0.36
BRAT1-202ENST00000421712 USP25Q9UHP3 1055 aa17.32■□□□□ 0.36
BRAT1-202ENST00000421712 IPPQ9Y573 584 aa17.32■□□□□ 0.36
BRAT1-202ENST00000421712 MAPTP10636 758 aaKnown RBP17.31■□□□□ 0.36
BRAT1-202ENST00000421712 ATF7P17544 494 aaPredicted RBP17.31■□□□□ 0.36
BRAT1-202ENST00000421712 NMT1P30419 496 aaKnown RBP17.31■□□□□ 0.36
BRAT1-202ENST00000421712 MATR3P43243 847 aaKnown RBP eCLIP17.31■□□□□ 0.36
BRAT1-202ENST00000421712 NCKAP1LP55160 1127 aa17.31■□□□□ 0.36
BRAT1-202ENST00000421712 GRIN2CQ14957 1233 aa17.31■□□□□ 0.36
BRAT1-202ENST00000421712 NT5DC1Q5TFE4 455 aa17.31■□□□□ 0.36
BRAT1-202ENST00000421712 GLB1LQ6UWU2 654 aa17.31■□□□□ 0.36
BRAT1-202ENST00000421712 ZNF598Q86UK7 904 aaKnown RBP17.31■□□□□ 0.36
BRAT1-202ENST00000421712 SLC17A8Q8NDX2 589 aa17.31■□□□□ 0.36
BRAT1-202ENST00000421712 SP7Q8TDD2 431 aaPredicted RBP17.31■□□□□ 0.36
BRAT1-202ENST00000421712 HELQQ8TDG4 1101 aa17.31■□□□□ 0.36
BRAT1-202ENST00000421712 TARS2Q9BW92 718 aaKnown RBP17.31■□□□□ 0.36
BRAT1-202ENST00000421712 TMEM117Q9H0C3 514 aa17.31■□□□□ 0.36
BRAT1-202ENST00000421712 BLZF1Q9H2G9 400 aa17.31■□□□□ 0.36
BRAT1-202ENST00000421712 PDZD7Q9H5P4 517 aa17.31■□□□□ 0.36
BRAT1-202ENST00000421712 SEL1LQ9UBV2 794 aa17.31■□□□□ 0.36
BRAT1-202ENST00000421712 INPP5FQ9Y2H2 1132 aa17.31■□□□□ 0.36
BRAT1-202ENST00000421712 HES2Q9Y543 173 aa17.31■□□□□ 0.36
BRAT1-202ENST00000421712 EDN1P05305 212 aa17.3■□□□□ 0.36
BRAT1-202ENST00000421712 TAS1R3Q7RTX0 852 aa17.3■□□□□ 0.36
BRAT1-202ENST00000421712 MRPL10Q7Z7H8 261 aaKnown RBP17.3■□□□□ 0.36
BRAT1-202ENST00000421712 ZBTB33Q86T24 672 aa17.3■□□□□ 0.36
BRAT1-202ENST00000421712 GRAMD1CQ8IYS0 662 aa17.3■□□□□ 0.36
BRAT1-202ENST00000421712 PAGE5Q96GU1 130 aa17.3■□□□□ 0.36
BRAT1-202ENST00000421712 CASD1Q96PB1 797 aa17.3■□□□□ 0.36
BRAT1-202ENST00000421712 ACO2Q99798 780 aaKnown RBP17.3■□□□□ 0.36
BRAT1-202ENST00000421712 C7orf25Q9BPX7 421 aa17.3■□□□□ 0.36
BRAT1-202ENST00000421712 C17orf80Q9BSJ5 609 aa17.3■□□□□ 0.36
BRAT1-202ENST00000421712 TRIM9Q9C026 710 aa17.3■□□□□ 0.36
BRAT1-202ENST00000421712 PRDM12Q9H4Q4 367 aa17.3■□□□□ 0.36
BRAT1-202ENST00000421712 PARP2Q9UGN5 583 aa17.3■□□□□ 0.36
BRAT1-202ENST00000421712 TBX20Q9UMR3 447 aa17.3■□□□□ 0.36
BRAT1-202ENST00000421712 HPSEQ9Y251 543 aa17.3■□□□□ 0.36
BRAT1-202ENST00000421712 MRPL42Q9Y6G3 142 aaKnown RBP17.3■□□□□ 0.36
BRAT1-202ENST00000421712 MEIS3P2A8K0S8 358 aa17.29■□□□□ 0.36
BRAT1-202ENST00000421712 ACTN4O43707 911 aaKnown RBP17.29■□□□□ 0.36
BRAT1-202ENST00000421712 ZNF202O95125 648 aa17.29■□□□□ 0.36
BRAT1-202ENST00000421712 GCNT3O95395 438 aa17.29■□□□□ 0.36
BRAT1-202ENST00000421712 HARSP12081 509 aaKnown RBP17.29■□□□□ 0.36
BRAT1-202ENST00000421712 SCP2P22307 547 aa17.29■□□□□ 0.36
BRAT1-202ENST00000421712 CASP1P29466 404 aa17.29■□□□□ 0.36
BRAT1-202ENST00000421712 ABCD1P33897 745 aa17.29■□□□□ 0.36
BRAT1-202ENST00000421712 CTNNB1P35222 781 aa17.29■□□□□ 0.36
BRAT1-202ENST00000421712 ERVK-21P61565 698 aa17.29■□□□□ 0.36
BRAT1-202ENST00000421712 RNASELQ05823 741 aaKnown RBP17.29■□□□□ 0.36
BRAT1-202ENST00000421712 DCAF4L1Q3SXM0 396 aa17.29■□□□□ 0.36
BRAT1-202ENST00000421712 ZNF568Q3ZCX4 644 aa17.29■□□□□ 0.36
BRAT1-202ENST00000421712 CLLU1OSQ5K130 101 aa17.29■□□□□ 0.36
BRAT1-202ENST00000421712 EEF1DP3Q658K8 133 aa17.29■□□□□ 0.36
BRAT1-202ENST00000421712 SPRED2Q7Z698 418 aa17.29■□□□□ 0.36
BRAT1-202ENST00000421712 TMEM192Q8IY95 271 aa17.29■□□□□ 0.36
BRAT1-202ENST00000421712 SMG8Q8ND04 991 aaKnown RBP17.29■□□□□ 0.36
BRAT1-202ENST00000421712 URGCPQ8TCY9 931 aa17.29■□□□□ 0.36
BRAT1-202ENST00000421712 CCDC34Q96HJ3 373 aa17.29■□□□□ 0.36
BRAT1-202ENST00000421712 GOLPH3LQ9H4A5 285 aa17.29■□□□□ 0.36
BRAT1-202ENST00000421712 NXF3Q9H4D5 531 aaKnown RBP17.29■□□□□ 0.36
BRAT1-202ENST00000421712 RSAD1Q9HA92 442 aa17.29■□□□□ 0.36
BRAT1-202ENST00000421712 RC3H2Q9HBD1 1191 aaKnown RBP17.29■□□□□ 0.36
BRAT1-202ENST00000421712 UBN1Q9NPG3 1134 aa17.29■□□□□ 0.36
BRAT1-202ENST00000421712 RNF19AQ9NV58 838 aa17.29■□□□□ 0.36
BRAT1-202ENST00000421712 TYW1Q9NV66 732 aaKnown RBP17.29■□□□□ 0.36
BRAT1-202ENST00000421712 MTMR10Q9NXD2 777 aa17.29■□□□□ 0.36
BRAT1-202ENST00000421712 TNFSF13BQ9Y275 285 aa17.29■□□□□ 0.36
BRAT1-202ENST00000421712 RFXAPO00287 272 aa17.28■□□□□ 0.36
BRAT1-202ENST00000421712 OFD1O75665 1012 aa17.28■□□□□ 0.36
BRAT1-202ENST00000421712 AKAP5P24588 427 aa17.28■□□□□ 0.36
BRAT1-202ENST00000421712 LIG4P49917 911 aa17.28■□□□□ 0.36
BRAT1-202ENST00000421712 COASYQ13057 564 aa17.28■□□□□ 0.36
BRAT1-202ENST00000421712 CUL4BQ13620 913 aa17.28■□□□□ 0.36
BRAT1-202ENST00000421712 EPC2Q52LR7 807 aa17.28■□□□□ 0.36
BRAT1-202ENST00000421712 ZC2HC1CQ53FD0 456 aaPredicted RBP17.28■□□□□ 0.36
BRAT1-202ENST00000421712 NOMO2Q5JPE7 1267 aa17.28■□□□□ 0.36
BRAT1-202ENST00000421712 AGMOQ6ZNB7 445 aa17.28■□□□□ 0.36
BRAT1-202ENST00000421712 ZNF720Q7Z2F6 126 aa17.28■□□□□ 0.36
BRAT1-202ENST00000421712 FBXO22Q8NEZ5 403 aa17.28■□□□□ 0.36
BRAT1-202ENST00000421712 SAMD11Q96NU1 681 aa17.28■□□□□ 0.36
BRAT1-202ENST00000421712 GAS2L1Q99501 681 aaPredicted RBP17.28■□□□□ 0.36
BRAT1-202ENST00000421712 MRPL9Q9BYD2 267 aaKnown RBP17.28■□□□□ 0.36
BRAT1-202ENST00000421712 RNF39Q9H2S5 420 aa17.28■□□□□ 0.36
BRAT1-202ENST00000421712 AAASQ9NRG9 546 aa17.28■□□□□ 0.36
BRAT1-202ENST00000421712 ANKFY1Q9P2R3 1169 aa17.28■□□□□ 0.36
BRAT1-202ENST00000421712 RWDD3Q9Y3V2 267 aa17.28■□□□□ 0.36
BRAT1-202ENST00000421712 FAM237AA0A1B0GTK4 181 aa17.27■□□□□ 0.36
BRAT1-202ENST00000421712 IGFBP4P22692 258 aa17.27■□□□□ 0.36
BRAT1-202ENST00000421712 GTF2BQ00403 316 aa17.27■□□□□ 0.36
BRAT1-202ENST00000421712 MPZL3Q6UWV2 235 aa17.27■□□□□ 0.36
BRAT1-202ENST00000421712 LRRC43Q8N309 656 aa17.27■□□□□ 0.36
BRAT1-202ENST00000421712 ZBTB45Q96K62 511 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms