RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 TNFSF13BQ9Y275 285 aa20.6■□□□□ 0.89
SSU72-203ENST00000378725 INSL6Q9Y581 213 aa20.6■□□□□ 0.89
SSU72-203ENST00000378725 PCDHB2Q9Y5E7 798 aa20.6■□□□□ 0.89
SSU72-203ENST00000378725 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.59■□□□□ 0.89
SSU72-203ENST00000378725 TLL1O43897 1013 aa20.59■□□□□ 0.89
SSU72-203ENST00000378725 PBX2P40425 430 aa20.59■□□□□ 0.89
SSU72-203ENST00000378725 ZC2HC1CQ53FD0 456 aaPredicted RBP20.59■□□□□ 0.89
SSU72-203ENST00000378725 ATF7IP2Q5U623 682 aa20.59■□□□□ 0.89
SSU72-203ENST00000378725 ZPBP2Q6X784 338 aa20.59■□□□□ 0.89
SSU72-203ENST00000378725 CCDC34Q96HJ3 373 aa20.59■□□□□ 0.89
SSU72-203ENST00000378725 TARS2Q9BW92 718 aaKnown RBP20.59■□□□□ 0.89
SSU72-203ENST00000378725 RC3H2Q9HBD1 1191 aaKnown RBP20.59■□□□□ 0.89
SSU72-203ENST00000378725 TBC1D7Q9P0N9 293 aa20.59■□□□□ 0.89
SSU72-203ENST00000378725 MSRAQ9UJ68 235 aa20.59■□□□□ 0.89
SSU72-203ENST00000378725 YBX2Q9Y2T7 364 aaKnown RBP20.59■□□□□ 0.89
SSU72-203ENST00000378725 RANBP2P49792 3224 aaKnown RBP20.58■□□□□ 0.89
SSU72-203ENST00000378725 PIGRP01833 764 aa20.58■□□□□ 0.89
SSU72-203ENST00000378725 PRR29P0C7W0 189 aa20.58■□□□□ 0.89
SSU72-203ENST00000378725 MYOGP15173 224 aa20.58■□□□□ 0.89
SSU72-203ENST00000378725 PROZP22891 400 aa20.58■□□□□ 0.89
SSU72-203ENST00000378725 DPYDQ12882 1025 aa20.58■□□□□ 0.89
SSU72-203ENST00000378725 EEF1DP3Q658K8 133 aa20.58■□□□□ 0.89
SSU72-203ENST00000378725 CDR2LQ86X02 465 aaPredicted RBP20.58■□□□□ 0.89
SSU72-203ENST00000378725 SMG8Q8ND04 991 aaKnown RBP20.58■□□□□ 0.89
SSU72-203ENST00000378725 SP7Q8TDD2 431 aaPredicted RBP20.58■□□□□ 0.89
SSU72-203ENST00000378725 HVCN1Q96D96 273 aa20.58■□□□□ 0.89
SSU72-203ENST00000378725 LMBRD1Q9NUN5 540 aa20.58■□□□□ 0.89
SSU72-203ENST00000378725 RNF19AQ9NV58 838 aa20.58■□□□□ 0.89
SSU72-203ENST00000378725 PCDHB13Q9Y5F0 798 aa20.58■□□□□ 0.89
SSU72-203ENST00000378725 TTC3P53804 2025 aa20.58■□□□□ 0.88
SSU72-203ENST00000378725 PTPRSQ13332 1948 aa20.57■□□□□ 0.88
SSU72-203ENST00000378725 ABLIM1O14639 778 aa20.57■□□□□ 0.88
SSU72-203ENST00000378725 CASP5P51878 434 aa20.57■□□□□ 0.88
SSU72-203ENST00000378725 ALCAMQ13740 583 aa20.57■□□□□ 0.88
SSU72-203ENST00000378725 MAP4K3Q8IVH8 894 aa20.57■□□□□ 0.88
SSU72-203ENST00000378725 PGBD4Q96DM1 585 aa20.57■□□□□ 0.88
SSU72-203ENST00000378725 FGFBP2Q9BYJ0 223 aa20.57■□□□□ 0.88
SSU72-203ENST00000378725 IPPQ9Y573 584 aa20.57■□□□□ 0.88
SSU72-203ENST00000378725 HOXA2O43364 376 aa20.56■□□□□ 0.88
SSU72-203ENST00000378725 TOM1L1O75674 476 aa20.56■□□□□ 0.88
SSU72-203ENST00000378725 GCNT3O95395 438 aa20.56■□□□□ 0.88
SSU72-203ENST00000378725 NPTXRO95502 500 aa20.56■□□□□ 0.88
SSU72-203ENST00000378725 MYBP10242 640 aa20.56■□□□□ 0.88
SSU72-203ENST00000378725 DNAJB2P25686 324 aa20.56■□□□□ 0.88
SSU72-203ENST00000378725 PSMD2Q13200 908 aa20.56■□□□□ 0.88
SSU72-203ENST00000378725 POSTNQ15063 836 aa20.56■□□□□ 0.88
SSU72-203ENST00000378725 TMEM132AQ24JP5 1023 aa20.56■□□□□ 0.88
SSU72-203ENST00000378725 KMT5BQ4FZB7 885 aa20.56■□□□□ 0.88
SSU72-203ENST00000378725 FAM26FQ5R3K3 315 aa20.56■□□□□ 0.88
SSU72-203ENST00000378725 L1TD1Q5T7N2 865 aaKnown RBP20.56■□□□□ 0.88
SSU72-203ENST00000378725 AGMOQ6ZNB7 445 aa20.56■□□□□ 0.88
SSU72-203ENST00000378725 HPS3Q969F9 1004 aa20.56■□□□□ 0.88
SSU72-203ENST00000378725 LRCH3Q96II8 777 aa20.56■□□□□ 0.88
SSU72-203ENST00000378725 YME1L1Q96TA2 773 aa20.56■□□□□ 0.88
SSU72-203ENST00000378725 ADPGKQ9BRR6 497 aa20.56■□□□□ 0.88
SSU72-203ENST00000378725 LCHNA4D1U4 455 aa20.55■□□□□ 0.88
SSU72-203ENST00000378725 RPN1P04843 607 aaKnown RBP20.55■□□□□ 0.88
SSU72-203ENST00000378725 FGFR1P11362 822 aa20.55■□□□□ 0.88
SSU72-203ENST00000378725 IBSPP21815 317 aaPredicted RBP20.55■□□□□ 0.88
SSU72-203ENST00000378725 DCAF4L1Q3SXM0 396 aa20.55■□□□□ 0.88
SSU72-203ENST00000378725 GPR153Q6NV75 609 aa20.55■□□□□ 0.88
SSU72-203ENST00000378725 MPZL3Q6UWV2 235 aa20.55■□□□□ 0.88
SSU72-203ENST00000378725 EPM2AIP1Q7L775 607 aaPredicted RBP20.55■□□□□ 0.88
SSU72-203ENST00000378725 APBB1IPQ7Z5R6 666 aaPredicted RBP20.55■□□□□ 0.88
SSU72-203ENST00000378725 RSPH1Q8WYR4 309 aa20.55■□□□□ 0.88
SSU72-203ENST00000378725 TIFAQ96CG3 184 aa20.55■□□□□ 0.88
SSU72-203ENST00000378725 ZBTB45Q96K62 511 aaPredicted RBP20.55■□□□□ 0.88
SSU72-203ENST00000378725 CASD1Q96PB1 797 aa20.55■□□□□ 0.88
SSU72-203ENST00000378725 ACCSQ96QU6 501 aa20.55■□□□□ 0.88
SSU72-203ENST00000378725 TRIM6Q9C030 488 aaPredicted RBP20.55■□□□□ 0.88
SSU72-203ENST00000378725 TMEM117Q9H0C3 514 aa20.55■□□□□ 0.88
SSU72-203ENST00000378725 RNF39Q9H2S5 420 aa20.55■□□□□ 0.88
SSU72-203ENST00000378725 UBN1Q9NPG3 1134 aa20.55■□□□□ 0.88
SSU72-203ENST00000378725 MYH11P35749 1972 aa20.54■□□□□ 0.88
SSU72-203ENST00000378725 MEIS3P2A8K0S8 358 aa20.54■□□□□ 0.88
SSU72-203ENST00000378725 EIF3DO15371 548 aaKnown RBP eCLIP20.54■□□□□ 0.88
SSU72-203ENST00000378725 KINO60870 393 aaKnown RBP20.54■□□□□ 0.88
SSU72-203ENST00000378725 OFD1O75665 1012 aa20.54■□□□□ 0.88
SSU72-203ENST00000378725 CA3P07451 260 aa20.54■□□□□ 0.88
SSU72-203ENST00000378725 MCF2P10911 925 aa20.54■□□□□ 0.88
SSU72-203ENST00000378725 ITGA4P13612 1032 aa20.54■□□□□ 0.88
SSU72-203ENST00000378725 GATMP50440 423 aa20.54■□□□□ 0.88
SSU72-203ENST00000378725 MCL1Q07820 350 aa20.54■□□□□ 0.88
SSU72-203ENST00000378725 KCNA1Q09470 495 aa20.54■□□□□ 0.88
SSU72-203ENST00000378725 KCNB1Q14721 858 aa20.54■□□□□ 0.88
SSU72-203ENST00000378725 CLLU1OSQ5K130 101 aa20.54■□□□□ 0.88
SSU72-203ENST00000378725 STXBP4Q6ZWJ1 553 aa20.54■□□□□ 0.88
SSU72-203ENST00000378725 CMTR2Q8IYT2 770 aaKnown RBP20.54■□□□□ 0.88
SSU72-203ENST00000378725 RNF169Q8NCN4 708 aa20.54■□□□□ 0.88
SSU72-203ENST00000378725 GLIS3Q8NEA6 775 aa20.54■□□□□ 0.88
SSU72-203ENST00000378725 SPATA20Q8TB22 786 aa20.54■□□□□ 0.88
SSU72-203ENST00000378725 ZNF507Q8TCN5 953 aa20.54■□□□□ 0.88
SSU72-203ENST00000378725 LPPQ93052 612 aa20.54■□□□□ 0.88
SSU72-203ENST00000378725 CDT1Q9H211 546 aa20.54■□□□□ 0.88
SSU72-203ENST00000378725 NKX2-4Q9H2Z4 354 aa20.54■□□□□ 0.88
SSU72-203ENST00000378725 HOOK1Q9UJC3 728 aaKnown RBP20.54■□□□□ 0.88
SSU72-203ENST00000378725 HES2Q9Y543 173 aa20.54■□□□□ 0.88
SSU72-203ENST00000378725 STYXL1Q9Y6J8 313 aa20.54■□□□□ 0.88
SSU72-203ENST00000378725 TMEM265A0A087WTH1 108 aa20.53■□□□□ 0.88
SSU72-203ENST00000378725 PRPF6O94906 941 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms