RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 HAPLN2Q9GZV7 340 aa17.62■□□□□ 0.41
SCNN1A-202ENST00000338748 PORCNQ9H237 461 aa17.62■□□□□ 0.41
SCNN1A-202ENST00000338748 TAF1DQ9H5J8 278 aaPredicted RBP17.62■□□□□ 0.41
SCNN1A-202ENST00000338748 ABCB6Q9NP58 842 aa17.62■□□□□ 0.41
SCNN1A-202ENST00000338748 ZMYND10O75800 440 aa17.61■□□□□ 0.41
SCNN1A-202ENST00000338748 KIF22Q14807 665 aa17.61■□□□□ 0.41
SCNN1A-202ENST00000338748 BRDTQ58F21 947 aaPredicted RBP17.61■□□□□ 0.41
SCNN1A-202ENST00000338748 WDR78Q5VTH9 848 aa17.61■□□□□ 0.41
SCNN1A-202ENST00000338748 VPS36Q86VN1 386 aa17.61■□□□□ 0.41
SCNN1A-202ENST00000338748 FBXO16Q8IX29 292 aaPredicted RBP17.61■□□□□ 0.41
SCNN1A-202ENST00000338748 LRRC57Q8N9N7 239 aa17.61■□□□□ 0.41
SCNN1A-202ENST00000338748 MFSD14AQ96MC6 490 aa17.61■□□□□ 0.41
SCNN1A-202ENST00000338748 FAM213AQ9BRX8 229 aa17.61■□□□□ 0.41
SCNN1A-202ENST00000338748 DNAJC25-GNG10A0A024R161 153 aa17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 H2AFZP0C0S5 128 aa17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 DLATP10515 647 aaKnown RBP17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 MARK3P27448 753 aa17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 ARL2P36404 184 aa17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 GALCP54803 685 aa17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 TARBP2Q15633 366 aaKnown RBP17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 METTL7BQ6UX53 244 aa17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 H2AFVQ71UI9 128 aa17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 ZNF572Q7Z3I7 529 aaPredicted RBP17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 SPATA4Q8NEY3 305 aa17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 HINFPQ9BQA5 517 aa17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 NIFKQ9BYG3 293 aaKnown RBP17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 LRRIQ4A6NIV6 560 aa17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 SLC25A27O95847 323 aa17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 RFX1P22670 979 aa17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 NOP2P46087 812 aaKnown RBP17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 STAT5BP51692 787 aa17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 TUBB4BP68371 445 aa17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 CETN1Q12798 172 aa17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 NEDD9Q14511 834 aa17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 LMBRD2Q68DH5 695 aaPredicted RBP17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 KRT222Q8N1A0 295 aa17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 GPD1LQ8N335 351 aa17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 SLC7A3Q8WY07 619 aa17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 ZBTB9Q96C00 473 aa17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 ZBTB45Q96K62 511 aaPredicted RBP17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 RPGRIP1Q96KN7 1286 aa17.6■□□□□ 0.41
SCNN1A-202ENST00000338748 SIP14410 1827 aa17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 PMM2O15305 246 aa17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 ABCB4P21439 1286 aa17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 NLRP11P59045 1033 aaKnown RBP17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 LDLRAD1Q5T700 205 aa17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 KRT39Q6A163 491 aa17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 PPM1KQ8N3J5 372 aa17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 TPCN2Q8NHX9 752 aa17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 HDAC7Q8WUI4 952 aa17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 COPS5Q92905 334 aa17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 MMP19Q99542 508 aa17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 OSGEPQ9NPF4 335 aa17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 ZNFX1Q9P2E3 1918 aaKnown RBP17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 GLTPD2A6NH11 291 aa17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 GARTP22102 1010 aa17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 MATR3P43243 847 aaKnown RBP eCLIP17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 ZBTB41Q5SVQ8 909 aa17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 SV2AQ7L0J3 742 aa17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 HNRNPLLQ8WVV9 542 aaKnown RBP17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 ARHGEF26Q96DR7 871 aa17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 ZNF408Q9H9D4 720 aa17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 EFCC1Q9HA90 598 aa17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 TMEM8AQ9HCN3 771 aa17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 SEPT11Q9NVA2 429 aaKnown RBP17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 COQ4Q9Y3A0 265 aa17.59■□□□□ 0.41
SCNN1A-202ENST00000338748 TTLL13PA6NNM8 815 aa17.58■□□□□ 0.4
SCNN1A-202ENST00000338748 TGFB3P10600 412 aa17.58■□□□□ 0.4
SCNN1A-202ENST00000338748 LIG4P49917 911 aa17.58■□□□□ 0.4
SCNN1A-202ENST00000338748 ERVK-9P63128 1117 aa17.58■□□□□ 0.4
SCNN1A-202ENST00000338748 KCTD2Q14681 263 aa17.58■□□□□ 0.4
SCNN1A-202ENST00000338748 WDR93Q6P2C0 686 aa17.58■□□□□ 0.4
SCNN1A-202ENST00000338748 ARMC9Q7Z3E5 817 aa17.58■□□□□ 0.4
SCNN1A-202ENST00000338748 GSPT2Q8IYD1 628 aaKnown RBP17.58■□□□□ 0.4
SCNN1A-202ENST00000338748 HELQQ8TDG4 1101 aa17.58■□□□□ 0.4
SCNN1A-202ENST00000338748 AFAP1L1Q8TED9 768 aa17.58■□□□□ 0.4
SCNN1A-202ENST00000338748 SEPT1Q8WYJ6 367 aa17.58■□□□□ 0.4
SCNN1A-202ENST00000338748 GPR20Q99678 358 aa17.58■□□□□ 0.4
SCNN1A-202ENST00000338748 PI4K2AQ9BTU6 479 aa17.58■□□□□ 0.4
SCNN1A-202ENST00000338748 RBM12Q9NTZ6 932 aaKnown RBP17.58■□□□□ 0.4
SCNN1A-202ENST00000338748 PTPRJQ12913 1337 aa17.58■□□□□ 0.4
SCNN1A-202ENST00000338748 MYBL2P10244 700 aa17.57■□□□□ 0.4
SCNN1A-202ENST00000338748 USP8P40818 1118 aa17.57■□□□□ 0.4
SCNN1A-202ENST00000338748 NAMPTP43490 491 aa17.57■□□□□ 0.4
SCNN1A-202ENST00000338748 ACOT2P49753 483 aa17.57■□□□□ 0.4
SCNN1A-202ENST00000338748 MKRN3Q13064 507 aaKnown RBP17.57■□□□□ 0.4
SCNN1A-202ENST00000338748 CAPSQ13938 189 aa17.57■□□□□ 0.4
SCNN1A-202ENST00000338748 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.57■□□□□ 0.4
SCNN1A-202ENST00000338748 FASTKD5Q7L8L6 764 aaKnown RBP17.57■□□□□ 0.4
SCNN1A-202ENST00000338748 TMC2Q8TDI7 906 aa17.57■□□□□ 0.4
SCNN1A-202ENST00000338748 ZNF516Q92618 1163 aa17.57■□□□□ 0.4
SCNN1A-202ENST00000338748 PDGFCQ9NRA1 345 aa17.57■□□□□ 0.4
SCNN1A-202ENST00000338748 TSKSQ9UJT2 592 aa17.57■□□□□ 0.4
SCNN1A-202ENST00000338748 ATP8B3O60423 1300 aa17.57■□□□□ 0.4
SCNN1A-202ENST00000338748 ZBTB42B2RXF5 422 aa17.57■□□□□ 0.4
SCNN1A-202ENST00000338748 SGPL1O95470 568 aa17.57■□□□□ 0.4
SCNN1A-202ENST00000338748 GPC3P51654 580 aa17.57■□□□□ 0.4
SCNN1A-202ENST00000338748 RNASE9P60153 205 aaKnown RBP17.57■□□□□ 0.4
SCNN1A-202ENST00000338748 CCDC181Q5TID7 509 aa17.57■□□□□ 0.4
SCNN1A-202ENST00000338748 MAP1SQ66K74 1059 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms