RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 UTP11Q9Y3A2 253 aaKnown RBP9.85□□□□□ -0.83
PDGFC-201ENST00000274071 TELO2Q9Y4R8 837 aa9.85□□□□□ -0.83
PDGFC-201ENST00000274071 UNCXA6NJT0 531 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 KRIT1O00522 736 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 MGEA5O60502 916 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 ZBED1O96006 694 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 PIM1P11309 404 aaPredicted RBP9.84□□□□□ -0.83
PDGFC-201ENST00000274071 CRABP2P29373 138 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 TKTP29401 623 aaKnown RBP9.84□□□□□ -0.83
PDGFC-201ENST00000274071 METAP2P50579 478 aaKnown RBP eCLIP9.84□□□□□ -0.83
PDGFC-201ENST00000274071 CDR2Q01850 454 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 NAB2Q15742 525 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 LMBRD2Q68DH5 695 aaPredicted RBP9.84□□□□□ -0.83
PDGFC-201ENST00000274071 ACAD11Q709F0 780 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 RSPH3Q86UC2 560 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 DIS3L2Q8IYB7 885 aaKnown RBP9.84□□□□□ -0.83
PDGFC-201ENST00000274071 GRAMD1AQ96CP6 724 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 SEMA4AQ9H3S1 761 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 EMILIN3Q9NT22 766 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 MAGEC2Q9UBF1 373 aaPredicted RBP9.84□□□□□ -0.83
PDGFC-201ENST00000274071 CNOT7Q9UIV1 285 aaKnown RBP9.84□□□□□ -0.83
PDGFC-201ENST00000274071 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.84□□□□□ -0.83
PDGFC-201ENST00000274071 PKD1L3Q7Z443 1732 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 CCDC162PA2VCL2 907 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 IQCA1LA6NCM1 817 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 CCDC160A6NGH7 325 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 CES2O00748 559 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 RASGRF2O14827 1237 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 NKRFO15226 690 aaKnown RBP eCLIP9.84□□□□□ -0.83
PDGFC-201ENST00000274071 CPA3P15088 417 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 TUFMP49411 452 aaKnown RBP9.84□□□□□ -0.83
PDGFC-201ENST00000274071 CABP7Q86V35 215 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 ARHGAP24Q8N264 748 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 KBTBD3Q8NAB2 608 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 ZFP28Q8NHY6 868 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 PLEKHO2Q8TD55 490 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 STARD8Q92502 1023 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 STMN2Q93045 179 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 KAZALD1Q96I82 304 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 HGH1Q9BTY7 390 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 STMN4Q9H169 189 aaPredicted RBP9.84□□□□□ -0.83
PDGFC-201ENST00000274071 NLRC4Q9NPP4 1024 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 ZDHHC18Q9NUE0 388 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 KCNJ14Q9UNX9 436 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 FUOMA2VDF0 154 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 SPECC1L-ADORA2AF8WAN1 911 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 DGKIO75912 1065 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 MYH6P13533 1939 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 EVA1CP58658 441 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 CDC16Q13042 620 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 NR5A1Q13285 461 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 PTK7Q13308 1070 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 RPS6KA1Q15418 735 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 SEPT7Q16181 437 aaKnown RBP9.84□□□□□ -0.83
PDGFC-201ENST00000274071 NTRK3Q16288 839 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 SHROOM1Q2M3G4 852 aaPredicted RBP9.84□□□□□ -0.83
PDGFC-201ENST00000274071 CTC1Q2NKJ3 1217 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 SNRNP48Q6IEG0 339 aaKnown RBP9.84□□□□□ -0.83
PDGFC-201ENST00000274071 COPS6Q7L5N1 327 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 ADSSL1Q8N142 457 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 LSM14AQ8ND56 463 aaKnown RBP9.84□□□□□ -0.83
PDGFC-201ENST00000274071 XAGE3Q8WTP9 111 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 NSMCE3Q96MG7 304 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 NEURL2Q9BR09 285 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 TRIM51Q9BSJ1 452 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 NT5C3AQ9H0P0 336 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 QPCTLQ9NXS2 382 aa9.84□□□□□ -0.83
PDGFC-201ENST00000274071 TMA7Q9Y2S6 64 aaKnown RBP9.84□□□□□ -0.83
PDGFC-201ENST00000274071 CTDP1Q9Y5B0 961 aaPredicted RBP9.84□□□□□ -0.83
PDGFC-201ENST00000274071 C5P01031 1676 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 COL5A2P05997 1499 aaPredicted RBP9.83□□□□□ -0.84
PDGFC-201ENST00000274071 PCDH11YQ9BZA8 1340 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 GSC2O15499 205 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 TFAP2AP05549 437 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 FOXD4Q12950 439 aaPredicted RBP9.83□□□□□ -0.84
PDGFC-201ENST00000274071 LPIN1Q14693 890 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 CYTH1Q15438 398 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 TAF1BQ53T94 588 aaPredicted RBP9.83□□□□□ -0.84
PDGFC-201ENST00000274071 MIIPQ5JXC2 388 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 SYCP2LQ5T4T6 812 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 BTNL9Q6UXG8 535 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 CROCCP3Q8IVE0 287 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 ANKS1AQ92625 1134 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 VPS50Q96JG6 964 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 ERGIC2Q96RQ1 377 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 HAUS7Q99871 368 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 TMEM109Q9BVC6 243 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 KCNK9Q9NPC2 374 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 FAF1Q9UNN5 650 aaPredicted RBP9.83□□□□□ -0.84
PDGFC-201ENST00000274071 PNPLA7Q6ZV29 1317 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 RPTORQ8N122 1335 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 LRRC53A6NM62 1247 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 FOXO6A8MYZ6 492 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 CCDC188H7C350 402 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 GRM8O00222 908 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 PGRMC1O00264 195 aaKnown RBP9.83□□□□□ -0.84
PDGFC-201ENST00000274071 DKC1O60832 514 aaKnown RBP eCLIP9.83□□□□□ -0.84
PDGFC-201ENST00000274071 MMP1P03956 469 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 TAC1P20366 129 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 SLC5A2P31639 672 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms