RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.81□□□□□ -0.2
TMEM260-201ENST00000261556 MYCLP1P12525 358 aaPredicted RBP13.81□□□□□ -0.2
TMEM260-201ENST00000261556 SCG2P13521 617 aa13.81□□□□□ -0.2
TMEM260-201ENST00000261556 KDSRQ06136 332 aa13.81□□□□□ -0.2
TMEM260-201ENST00000261556 KRT80Q6KB66 452 aa13.81□□□□□ -0.2
TMEM260-201ENST00000261556 HEATR4Q86WZ0 1026 aa13.81□□□□□ -0.2
TMEM260-201ENST00000261556 MYLK2Q9H1R3 596 aa13.81□□□□□ -0.2
TMEM260-201ENST00000261556 PCDHA12Q9UN75 941 aa13.81□□□□□ -0.2
TMEM260-201ENST00000261556 NOC2LQ9Y3T9 749 aaKnown RBP13.81□□□□□ -0.2
TMEM260-201ENST00000261556 ATP6V0A2Q9Y487 856 aa13.81□□□□□ -0.2
TMEM260-201ENST00000261556 RASA4BC9J798 803 aa13.81□□□□□ -0.2
TMEM260-201ENST00000261556 GIPC1O14908 333 aa13.81□□□□□ -0.2
TMEM260-201ENST00000261556 RASA4O43374 803 aa13.81□□□□□ -0.2
TMEM260-201ENST00000261556 EXOC3O60645 756 aa13.81□□□□□ -0.2
TMEM260-201ENST00000261556 LMNB1P20700 586 aa13.81□□□□□ -0.2
TMEM260-201ENST00000261556 ZNF211Q13398 564 aaPredicted RBP13.81□□□□□ -0.2
TMEM260-201ENST00000261556 GJC2Q5T442 439 aaPredicted RBP13.81□□□□□ -0.2
TMEM260-201ENST00000261556 ILDR1Q86SU0 546 aaPredicted RBP13.81□□□□□ -0.2
TMEM260-201ENST00000261556 MAML1Q92585 1016 aa13.81□□□□□ -0.2
TMEM260-201ENST00000261556 THTPAQ9BU02 230 aa13.81□□□□□ -0.2
TMEM260-201ENST00000261556 MRPL1Q9BYD6 325 aaKnown RBP13.81□□□□□ -0.2
TMEM260-201ENST00000261556 EFR3BQ9Y2G0 817 aa13.81□□□□□ -0.2
TMEM260-201ENST00000261556 PCDHA1Q9Y5I3 950 aa13.81□□□□□ -0.2
TMEM260-201ENST00000261556 ARAP3Q8WWN8 1544 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 MED14O60244 1454 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 AGTP01019 485 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 TPBGLP0DKB5 382 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 EEF1GP26641 437 aaKnown RBP13.8□□□□□ -0.2
TMEM260-201ENST00000261556 PRR16Q569H4 304 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 SEL1L2Q5TEA6 688 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 DAB2IPQ5VWQ8 1189 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 TMC5Q6UXY8 1006 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 RDH13Q8NBN7 331 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 PUS7LQ9H0K6 701 aaKnown RBP13.8□□□□□ -0.2
TMEM260-201ENST00000261556 ASCC2Q9H1I8 757 aaPredicted RBP13.8□□□□□ -0.2
TMEM260-201ENST00000261556 TUBGCP4Q9UGJ1 667 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 APPL1Q9UKG1 709 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 KRT5P13647 590 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 PRCPP42785 496 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 PPP2R5CQ13362 524 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 ABCB5Q2M3G0 1257 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 APOA5Q6Q788 366 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 ANKRD35Q8N283 1001 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 PDZD8Q8NEN9 1154 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 RBM46Q8TBY0 533 aaKnown RBP13.8□□□□□ -0.2
TMEM260-201ENST00000261556 NAT14Q8WUY8 206 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 MRPL46Q9H2W6 279 aaKnown RBP13.8□□□□□ -0.2
TMEM260-201ENST00000261556 ZC4H2Q9NQZ6 224 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 SERPINB13Q9UIV8 391 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 REXO2Q9Y3B8 237 aaKnown RBP13.8□□□□□ -0.2
TMEM260-201ENST00000261556 AFF2P51816 1311 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 E7ENQ6 273 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 S100A1P23297 94 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 RGS2P41220 211 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 ITIH3Q06033 890 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 WDR44Q5JSH3 913 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 MAP3K21Q5TCX8 1036 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 PTPRN2Q92932 1015 aa13.8□□□□□ -0.2
TMEM260-201ENST00000261556 TRNAU1APQ9NX07 287 aaKnown RBP13.8□□□□□ -0.2
TMEM260-201ENST00000261556 H7C1W4 665 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 CCDC22O60826 627 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 RPS6KA4O75676 772 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 TSPAN9O75954 239 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 UNC5CO95185 931 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 ASPHQ12797 758 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 TRIM16LQ309B1 348 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 PDXDC1Q6P996 788 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 FBXO11Q86XK2 927 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 NUF2Q9BZD4 464 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 KIAA1683Q9H0B3 1180 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 CYP4F11Q9HBI6 524 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 MAP3K4Q9Y6R4 1608 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 MAP3K13O43283 966 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 ADCY6O43306 1168 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 KCNQ2O43526 872 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 CYTH3O43739 400 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 GCNT3O95395 438 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 ADD2P35612 726 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 TECP42680 631 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 IRX4P78413 519 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 RASGRF1Q13972 1273 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 KRT81Q14533 505 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 PEX5LQ8IYB4 626 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 FITM2Q8N6M3 262 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 RUNDC3BQ96NL0 473 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 PPARGC1AQ9UBK2 798 aaKnown RBP13.79□□□□□ -0.2
TMEM260-201ENST00000261556 ASMTLO95671 621 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 POLGP54098 1239 aaPredicted RBP13.79□□□□□ -0.2
TMEM260-201ENST00000261556 EPM2AIP1Q7L775 607 aaPredicted RBP13.79□□□□□ -0.2
TMEM260-201ENST00000261556 CCDC17Q96LX7 622 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 SLC12A4Q9UP95 1085 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 TACC3Q9Y6A5 838 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 ABCA9Q8IUA7 1624 aa13.79□□□□□ -0.2
TMEM260-201ENST00000261556 CYP2D7A0A087X1C5 515 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 RSPH10B2B2RC85 870 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 F8VZ95 297 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 RSPH10BP0C881 870 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 PTPREP23469 700 aa13.78□□□□□ -0.2
TMEM260-201ENST00000261556 TAF1BQ53T94 588 aaPredicted RBP13.78□□□□□ -0.2
TMEM260-201ENST00000261556 LCORLQ8N3X6 602 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms