RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Elmo3Q8BYZ7 720 aa16.44■□□□□ 0.22
Upf1-202ENSMUST00000215817 Cry2Q9R194 592 aa16.44■□□□□ 0.22
Upf1-202ENSMUST00000215817 Gm4307E9PZY4 289 aa16.44■□□□□ 0.22
Upf1-202ENSMUST00000215817 Serpinb3aG3X9V8 387 aa16.44■□□□□ 0.22
Upf1-202ENSMUST00000215817 Gm4312K9J7E2 289 aa16.44■□□□□ 0.22
Upf1-202ENSMUST00000215817 Olfr1352Q8VGX5 309 aa16.44■□□□□ 0.22
Upf1-202ENSMUST00000215817 CenpkQ9ESN5 271 aa16.44■□□□□ 0.22
Upf1-202ENSMUST00000215817 Gm6583E9Q8Z1 469 aa16.43■□□□□ 0.22
Upf1-202ENSMUST00000215817 Has3O08650 554 aa16.43■□□□□ 0.22
Upf1-202ENSMUST00000215817 Sec31aQ3UPL0 1230 aaKnown RBP16.43■□□□□ 0.22
Upf1-202ENSMUST00000215817 Znf579Q80VM4 562 aa16.43■□□□□ 0.22
Upf1-202ENSMUST00000215817 Mbtps2Q8CHX6 515 aa16.43■□□□□ 0.22
Upf1-202ENSMUST00000215817 Havcr2Q8VIM0 281 aa16.43■□□□□ 0.22
Upf1-202ENSMUST00000215817 Tlr3Q99MB1 905 aa16.43■□□□□ 0.22
Upf1-202ENSMUST00000215817 Stra6O70491 670 aa16.43■□□□□ 0.22
Upf1-202ENSMUST00000215817 Rad23aP54726 363 aa16.43■□□□□ 0.22
Upf1-202ENSMUST00000215817 Kcnj11Q61743 390 aa16.43■□□□□ 0.22
Upf1-202ENSMUST00000215817 Thnsl1Q8BH55 747 aa16.43■□□□□ 0.22
Upf1-202ENSMUST00000215817 Pum3Q8BKS9 647 aaKnown RBP16.43■□□□□ 0.22
Upf1-202ENSMUST00000215817 Usp26Q99MX1 835 aa16.43■□□□□ 0.22
Upf1-202ENSMUST00000215817 Vamp7P70280 220 aa16.43■□□□□ 0.22
Upf1-202ENSMUST00000215817 Atp1a2Q6PIE5 1020 aa16.43■□□□□ 0.22
Upf1-202ENSMUST00000215817 Map3k11Q80XI6 850 aa16.43■□□□□ 0.22
Upf1-202ENSMUST00000215817 Tcaf1Q8BNE1 924 aa16.43■□□□□ 0.22
Upf1-202ENSMUST00000215817 Rassf9Q8K342 435 aa16.43■□□□□ 0.22
Upf1-202ENSMUST00000215817 Arl8aQ8VEH3 186 aa16.43■□□□□ 0.22
Upf1-202ENSMUST00000215817 Tlr2Q9QUN7 784 aa16.43■□□□□ 0.22
Upf1-202ENSMUST00000215817 Aoc3O70423 765 aa16.42■□□□□ 0.22
Upf1-202ENSMUST00000215817 UgcgO88693 394 aa16.42■□□□□ 0.22
Upf1-202ENSMUST00000215817 Mfap3lQ9D3X9 409 aa16.42■□□□□ 0.22
Upf1-202ENSMUST00000215817 Alg13Q9D8C3 1166 aaKnown RBP16.42■□□□□ 0.22
Upf1-202ENSMUST00000215817 Tjap1Q9DCD5 539 aa16.42■□□□□ 0.22
Upf1-202ENSMUST00000215817 Anapc7Q9WVM3 565 aa16.42■□□□□ 0.22
Upf1-202ENSMUST00000215817 Myh2G3UW82 1942 aa16.42■□□□□ 0.22
Upf1-202ENSMUST00000215817 Samsn1P57725 372 aa16.42■□□□□ 0.22
Upf1-202ENSMUST00000215817 Tada2aQ8CHV6 443 aa16.42■□□□□ 0.22
Upf1-202ENSMUST00000215817 Ddx41Q91VN6 622 aaKnown RBP16.42■□□□□ 0.22
Upf1-202ENSMUST00000215817 Btbd19S4R1I0 287 aa16.42■□□□□ 0.22
Upf1-202ENSMUST00000215817 MtrA6H5Y3 1253 aa16.42■□□□□ 0.22
Upf1-202ENSMUST00000215817 SbdsP70122 250 aa16.42■□□□□ 0.22
Upf1-202ENSMUST00000215817 Ccdc28aQ8CEI3 192 aa16.42■□□□□ 0.22
Upf1-202ENSMUST00000215817 4921504E06RikQ8CET2 560 aa16.42■□□□□ 0.22
Upf1-202ENSMUST00000215817 Mamdc2Q8CG85 686 aa16.42■□□□□ 0.22
Upf1-202ENSMUST00000215817 Sgip1Q8VD37 806 aa16.42■□□□□ 0.22
Upf1-202ENSMUST00000215817 Akr1c14Q91WT7 323 aa16.42■□□□□ 0.22
Upf1-202ENSMUST00000215817 Q9CYI0 393 aa16.42■□□□□ 0.22
Upf1-202ENSMUST00000215817 Med7Q9CZB6 233 aa16.42■□□□□ 0.22
Upf1-202ENSMUST00000215817 Rasal2E9PW37 1286 aa16.42■□□□□ 0.22
Upf1-202ENSMUST00000215817 Tmem109Q3UBX0 243 aa16.42■□□□□ 0.22
Upf1-202ENSMUST00000215817 Ass1P16460 412 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Pla2g4aP47713 748 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Pcsk1P63239 753 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Tlr13Q6R5N8 991 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Rnf168Q80XJ2 565 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Vgll2Q8BGW8 322 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Pkp2Q9CQ73 795 aaKnown RBP16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Q9D2Q3 444 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Rmdn1Q9DCV4 305 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Ttll6A4Q9E8 822 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Zfp174B9EJW5 407 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Kpna6O35345 536 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Dsg3O35902 993 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 GpiP06745 558 aaKnown RBP16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Trim72Q1XH17 477 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Tcf12Q61286 706 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Gpd2Q64521 727 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Ndufaf7Q9CWG8 436 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 MymkQ9D1N4 221 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Kcnq4Q9JK97 696 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Gm6133B2RY53 190 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Nck2O55033 380 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Dzip3Q7TPV2 1204 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Dennd2aQ8C4S8 1000 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Cfap36Q8C6E0 343 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Scrn2Q8VCA8 425 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Tsnaxip1Q99P25 704 aa16.41■□□□□ 0.22
Upf1-202ENSMUST00000215817 Slc16a6B1AT66 607 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Eif3dO70194 548 aaKnown RBP16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 B3gat3P58158 335 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Pnpla5Q32LZ8 432 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Ccdc114Q3UX62 658 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Ccdc185Q3V118 621 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Cplx4Q80WM3 160 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Tubb4aQ9D6F9 444 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Klra10Q9R1G6 266 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Ubr2Q6WKZ8 1755 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Actn3O88990 900 aaKnown RBP16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Abcb1bP06795 1276 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Anks1aP59672 1150 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Tex35Q14BK3 207 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 PRAG1Q571I4 1179 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Fgd5Q80UZ0 1219 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Spice1Q8C804 860 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Cpa5Q8R4H4 436 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Olfr805Q8VFI4 319 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Rpa3Q9CQ71 121 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Adam22Q9R1V6 904 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Cyp2f2P33267 491 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Runx2Q08775 607 aa16.4■□□□□ 0.22
Upf1-202ENSMUST00000215817 Phlda1Q62392 405 aa16.4■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 41.1 ms