RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 BAT2P47176 376 aaKnown RBP1.29□□□□□ -2.2
snR54snR54 DSK2P48510 373 aa1.29□□□□□ -2.2
snR54snR54 CUE3P53137 624 aaKnown RBP1.29□□□□□ -2.2
snR54snR54 ALG9P53868 555 aaKnown RBP1.29□□□□□ -2.2
snR54snR54 PML1Q07930 204 aaPredicted RBP1.29□□□□□ -2.2
snR54snR54 PFK27Q12471 397 aaPredicted RBP1.29□□□□□ -2.2
snR54snR54 NBL1Q3E7Y6 73 aa1.29□□□□□ -2.2
snR54snR54 LAG2Q92325 660 aa1.29□□□□□ -2.2
snR54snR54 VMA5P31412 392 aaKnown RBP1.28□□□□□ -2.2
snR54snR54 LAS1P36146 502 aaPredicted RBP1.28□□□□□ -2.2
snR54snR54 SYS1P41544 203 aa1.28□□□□□ -2.2
snR54snR54 YGR168CP53293 376 aa1.28□□□□□ -2.2
snR54snR54 VPS68Q12016 184 aa1.28□□□□□ -2.2
snR54snR54 NFI1Q12216 726 aa1.28□□□□□ -2.2
snR54snR54 YDR262WQ12331 272 aa1.28□□□□□ -2.2
snR54snR54 HIS3P06633 220 aa1.27□□□□□ -2.21
snR54snR54 POT1P27796 417 aaKnown RBP RIP-Chip data1.27□□□□□ -2.21not detected
snR54snR54 ACB1P31787 87 aa1.27□□□□□ -2.21
snR54snR54 YEL043WP32618 956 aa1.27□□□□□ -2.21
snR54snR54 CDC13P32797 924 aaKnown RBP1.27□□□□□ -2.21
snR54snR54 DAN1P47178 298 aa1.27□□□□□ -2.21
snR54snR54 IRC4Q03036 179 aa1.27□□□□□ -2.21
snR54snR54 SNX41Q04053 625 aa1.27□□□□□ -2.21
snR54snR54 PAN1P32521 1480 aa1.26□□□□□ -2.21
snR54snR54 TAL1P15019 335 aaKnown RBP1.26□□□□□ -2.21
snR54snR54 CLB6P32943 380 aa1.26□□□□□ -2.21
snR54snR54 SIF2P38262 535 aa1.26□□□□□ -2.21
snR54snR54 YFL064CP43540 174 aa1.26□□□□□ -2.21
snR54snR54 YJR146WP47174 117 aa1.26□□□□□ -2.21
snR54snR54 PRP24P49960 444 aaKnown RBP1.26□□□□□ -2.21
snR54snR54 LIF1P53150 421 aa1.26□□□□□ -2.21
snR54snR54 YGR266WP53326 701 aa1.26□□□□□ -2.21
snR54snR54 CGI121Q03705 181 aaKnown RBP1.26□□□□□ -2.21
snR54snR54 YMR166CQ03829 368 aa1.26□□□□□ -2.21
snR54snR54 YOR283WQ12040 230 aaKnown RBP1.26□□□□□ -2.21
snR54snR54 DCP1Q12517 231 aaPredicted RBP1.26□□□□□ -2.21
snR54snR54 ZWF1P11412 505 aaKnown RBP1.25□□□□□ -2.21
snR54snR54 IMP1P28627 190 aa1.25□□□□□ -2.21
snR54snR54 YPC1P38298 316 aa1.25□□□□□ -2.21
snR54snR54 PES4P39684 611 aa1.25□□□□□ -2.21
snR54snR54 UTP23Q12339 254 aaKnown RBP1.25□□□□□ -2.21
snR54snR54 PHO80P20052 293 aa1.24□□□□□ -2.21
snR54snR54 ZRT1P32804 376 aa1.24□□□□□ -2.21
snR54snR54 TPO5P36029 618 aa1.24□□□□□ -2.21
snR54snR54 YKL162CP36052 402 aa1.24□□□□□ -2.21
snR54snR54 MRPL3P36516 390 aa1.24□□□□□ -2.21
snR54snR54 TPN1P53099 579 aa1.24□□□□□ -2.21
snR54snR54 YGR016WP53209 190 aa1.24□□□□□ -2.21
snR54snR54 BIO4P53630 237 aa1.24□□□□□ -2.21
snR54snR54 NNT1Q05874 261 aa1.24□□□□□ -2.21
snR54snR54 YLR446WQ06204 433 aa1.24□□□□□ -2.21
snR54snR54 SUE1Q06524 206 aa1.24□□□□□ -2.21
snR54snR54 AGC1Q12482 902 aa1.24□□□□□ -2.21
snR54snR54 RPL18AP0CX49 186 aaKnown RBP1.23□□□□□ -2.21
snR54snR54 RPL18BP0CX50 186 aaKnown RBP1.23□□□□□ -2.21
snR54snR54 RRT12P25381 491 aa1.23□□□□□ -2.21
snR54snR54 COY1P34237 679 aa1.23□□□□□ -2.21
snR54snR54 MCH2P36032 473 aa1.23□□□□□ -2.21
snR54snR54 TRM7P38238 310 aaKnown RBP1.23□□□□□ -2.21
snR54snR54 YHR035WP38769 630 aa1.23□□□□□ -2.21
snR54snR54 LIN1P38852 340 aaPredicted RBP1.23□□□□□ -2.21
snR54snR54 AVT6P40074 448 aa1.23□□□□□ -2.21
snR54snR54 RSM27P53305 110 aa1.23□□□□□ -2.21
snR54snR54 PDR16P53860 351 aaKnown RBP1.23□□□□□ -2.21
snR54snR54 YHR086W-AQ3E746 53 aa1.23□□□□□ -2.21
snR54snR54 RPL26AP05743 127 aaKnown RBP1.22□□□□□ -2.21
snR54snR54 RNR2P09938 399 aaKnown RBP1.22□□□□□ -2.21
snR54snR54 NRG2P38082 220 aa1.22□□□□□ -2.21
snR54snR54 MBA1P38300 278 aa1.22□□□□□ -2.21
snR54snR54 VAB2P40003 282 aa1.22□□□□□ -2.21
snR54snR54 INA22P40576 216 aa1.22□□□□□ -2.21
snR54snR54 RPL26BP53221 127 aaKnown RBP1.22□□□□□ -2.21
snR54snR54 MRS2Q01926 470 aa1.22□□□□□ -2.21
snR54snR54 CTS2Q06350 511 aa1.22□□□□□ -2.21
snR54snR54 YDL144CQ07589 356 aa1.22□□□□□ -2.21
snR54snR54 PSY3Q12318 242 aa1.22□□□□□ -2.21
snR54snR54 ATG5Q12380 294 aa1.22□□□□□ -2.21
snR54snR54 GAL7P08431 366 aa1.21□□□□□ -2.22
snR54snR54 GCG1P32656 232 aaKnown RBP1.21□□□□□ -2.22
snR54snR54 IMP3P32899 183 aaPredicted RBP1.21□□□□□ -2.22
snR54snR54 KRE29P40026 464 aa1.21□□□□□ -2.22
snR54snR54 YJR141WP47172 347 aaPredicted RBP1.21□□□□□ -2.22
snR54snR54 OKP1P53298 406 aa1.21□□□□□ -2.22
snR54snR54 SWT21P53873 357 aaPredicted RBP1.21□□□□□ -2.22
snR54snR54 GRH1Q04410 372 aaKnown RBP1.21□□□□□ -2.22
snR54snR54 STE23Q06010 1027 aa1.21□□□□□ -2.22
snR54snR54 TY3A-GQ12173 290 aa1.21□□□□□ -2.22
snR54snR54 TY3A-IQ99219 290 aa1.21□□□□□ -2.22
snR54snR54 ADH3P07246 375 aaKnown RBP1.2□□□□□ -2.22
snR54snR54 GAL3P13045 520 aa1.2□□□□□ -2.22
snR54snR54 SCO1P23833 295 aa1.2□□□□□ -2.22
snR54snR54 IFM1P25038 676 aa1.2□□□□□ -2.22
snR54snR54 RPL16BP26785 198 aaKnown RBP1.2□□□□□ -2.22
snR54snR54 UBC13P52490 153 aa1.2□□□□□ -2.22
snR54snR54 RCF1Q03713 159 aa1.2□□□□□ -2.22
snR54snR54 TVP15Q03860 143 aa1.2□□□□□ -2.22
snR54snR54 FCF1Q05498 189 aaPredicted RBP1.2□□□□□ -2.22
snR54snR54 PBP4Q07362 185 aaKnown RBP1.2□□□□□ -2.22
snR54snR54 NUP157P40064 1391 aaKnown RBP1.2□□□□□ -2.22
snR54snR54 DPM1P14020 267 aaKnown RBP1.19□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 87.8 ms