RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeastyeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB4YPR056W YHR035WP38769 630 aa5.37□□□□□ -1.55
TFB4YPR056W DHH1P39517 506 aaKnown RBP5.37□□□□□ -1.55
TFB4YPR056W SMB1P40018 196 aaKnown RBP5.37□□□□□ -1.55
TFB4YPR056W YFH7P43591 353 aa5.37□□□□□ -1.55
TFB4YPR056W YJR012CP47087 207 aa5.37□□□□□ -1.55
TFB4YPR056W YJR054WP47114 497 aa5.37□□□□□ -1.55
TFB4YPR056W YNR066CP53752 436 aa5.37□□□□□ -1.55
TFB4YPR056W TRM82Q03774 444 aa5.37□□□□□ -1.55
TFB4YPR056W MHR1Q06630 226 aa5.37□□□□□ -1.55
TFB4YPR056W RAD34Q06665 692 aa5.37□□□□□ -1.55
TFB4YPR056W MCH4Q08268 501 aa5.37□□□□□ -1.55
TFB4YPR056W SFM1Q12314 213 aa5.37□□□□□ -1.55
TFB4YPR056W ARP6Q12509 438 aa5.37□□□□□ -1.55
TFB4YPR056W MEX67Q99257 599 aaKnown RBP5.37□□□□□ -1.55
TFB4YPR056W IZH4Q99393 312 aa5.37□□□□□ -1.55
TFB4YPR056W RPL31AP0C2H8 113 aaKnown RBP5.36□□□□□ -1.55
TFB4YPR056W YBR241CP38142 488 aa5.36□□□□□ -1.55
TFB4YPR056W ECM13P38195 257 aa5.36□□□□□ -1.55
TFB4YPR056W BDH1P39714 382 aa5.36□□□□□ -1.55
TFB4YPR056W YER137CP40083 148 aaKnown RBP5.36□□□□□ -1.55
TFB4YPR056W COG3P40094 801 aa5.36□□□□□ -1.55
TFB4YPR056W FAU1P40099 211 aa5.36□□□□□ -1.55
TFB4YPR056W YCH1P42937 148 aa5.36□□□□□ -1.55
TFB4YPR056W KEG1P43614 200 aa5.36□□□□□ -1.55
TFB4YPR056W YJR030CP47101 745 aa5.36□□□□□ -1.55
TFB4YPR056W MTM1P53320 366 aa5.36□□□□□ -1.55
TFB4YPR056W RFU1Q08003 200 aa5.36□□□□□ -1.55
TFB4YPR056W YAP7Q08182 245 aa5.36□□□□□ -1.55
TFB4YPR056W YNG1Q08465 219 aa5.36□□□□□ -1.55
TFB4YPR056W YCT1Q12235 531 aa5.36□□□□□ -1.55
TFB4YPR056W RKM5Q12367 367 aa5.36□□□□□ -1.55
TFB4YPR056W YOP1Q12402 180 aa5.36□□□□□ -1.55
TFB4YPR056W RAD50P12753 1312 aa5.36□□□□□ -1.55
TFB4YPR056W SIR4P11978 1358 aa5.35□□□□□ -1.55
TFB4YPR056W PET54P10834 293 aa5.35□□□□□ -1.55
TFB4YPR056W MDH3P32419 343 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
TFB4YPR056W TCA17P32613 152 aa5.35□□□□□ -1.55
TFB4YPR056W RAD5P32849 1169 aaPredicted RBP5.35□□□□□ -1.55
TFB4YPR056W LAG1P38703 411 aa5.35□□□□□ -1.55
TFB4YPR056W YIL060WP40519 144 aa5.35□□□□□ -1.55
TFB4YPR056W YJR111CP47148 283 aaKnown RBP5.35□□□□□ -1.55
TFB4YPR056W NUP57P48837 541 aa5.35□□□□□ -1.55
TFB4YPR056W MST27P53176 234 aa5.35□□□□□ -1.55
TFB4YPR056W ASI3P53983 676 aa5.35□□□□□ -1.55
TFB4YPR056W NUP49Q02199 472 aa5.35□□□□□ -1.55
TFB4YPR056W ABF2Q02486 183 aa5.35□□□□□ -1.55
TFB4YPR056W YPL014WQ02606 381 aa5.35□□□□□ -1.55
TFB4YPR056W HEM25Q07534 307 aa5.35□□□□□ -1.55
TFB4YPR056W ORT1Q12375 292 aa5.35□□□□□ -1.55
TFB4YPR056W DET1Q99288 334 aaKnown RBP5.35□□□□□ -1.55
TFB4YPR056W YCR006CP25350 157 aa5.34□□□□□ -1.55
TFB4YPR056W HOM6P31116 359 aaKnown RBP5.34□□□□□ -1.55
TFB4YPR056W QRI5P32344 111 aa5.34□□□□□ -1.55
TFB4YPR056W MUD1P32605 298 aaKnown RBP5.34□□□□□ -1.55
TFB4YPR056W NTF2P33331 125 aaKnown RBP5.34□□□□□ -1.55
TFB4YPR056W UPS2P35200 230 aa5.34□□□□□ -1.55
TFB4YPR056W YCR087C-AP37263 153 aa5.34□□□□□ -1.55
TFB4YPR056W RIM2P38127 377 aa5.34□□□□□ -1.55
TFB4YPR056W GRE3P38715 327 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
TFB4YPR056W LYS1P38998 373 aaRIP-Chip data5.34□□□□□ -1.55not detected
TFB4YPR056W EDC3P39998 551 aaKnown RBP5.34□□□□□ -1.55
TFB4YPR056W CDC1P40986 491 aa5.34□□□□□ -1.55
TFB4YPR056W YJL016WP47072 561 aa5.34□□□□□ -1.55
TFB4YPR056W NBP35P52920 328 aa5.34□□□□□ -1.55
TFB4YPR056W BRR6P53062 197 aa5.34□□□□□ -1.55
TFB4YPR056W NRK1P53915 240 aa5.34□□□□□ -1.55
TFB4YPR056W HNT3Q08702 217 aa5.34□□□□□ -1.55
TFB4YPR056W SNU23Q12368 194 aaPredicted RBP5.34□□□□□ -1.55
TFB4YPR056W SPO12P17123 173 aa5.33□□□□□ -1.56
TFB4YPR056W CAM1P29547 415 aaKnown RBP5.33□□□□□ -1.56
TFB4YPR056W SPS18P32572 300 aa5.33□□□□□ -1.56
TFB4YPR056W SGE1P33335 543 aa5.33□□□□□ -1.56
TFB4YPR056W HOT13P36078 116 aa5.33□□□□□ -1.56
TFB4YPR056W SEN34P39707 275 aa5.33□□□□□ -1.56
TFB4YPR056W GDS1P41913 522 aa5.33□□□□□ -1.56
TFB4YPR056W YFL015CP43578 164 aa5.33□□□□□ -1.56
TFB4YPR056W MOG1P47123 218 aa5.33□□□□□ -1.56
TFB4YPR056W GPI1P53306 609 aa5.33□□□□□ -1.56
TFB4YPR056W MAL13P53338 473 aa5.33□□□□□ -1.56
TFB4YPR056W MSO1P53604 210 aaKnown RBP5.33□□□□□ -1.56
TFB4YPR056W SPR6Q01684 191 aa5.33□□□□□ -1.56
TFB4YPR056W ECI1Q05871 280 aa5.33□□□□□ -1.56
TFB4YPR056W YPR127WQ06494 345 aa5.33□□□□□ -1.56
TFB4YPR056W SRL2Q12020 392 aa5.33□□□□□ -1.56
TFB4YPR056W FCY22Q12119 530 aa5.33□□□□□ -1.56
TFB4YPR056W RRP42Q12277 265 aaPredicted RBP5.33□□□□□ -1.56
TFB4YPR056W RPO41P13433 1351 aaKnown RBP5.32□□□□□ -1.56
TFB4YPR056W MTF1P14908 341 aaKnown RBP5.32□□□□□ -1.56
TFB4YPR056W BUB3P26449 341 aa5.32□□□□□ -1.56
TFB4YPR056W RPL16BP26785 198 aaKnown RBP5.32□□□□□ -1.56
TFB4YPR056W UTR4P32626 227 aa5.32□□□□□ -1.56
TFB4YPR056W TIP20P33891 701 aa5.32□□□□□ -1.56
TFB4YPR056W SHE3P38272 425 aaKnown RBP5.32□□□□□ -1.56
TFB4YPR056W YBP1P38315 674 aa5.32□□□□□ -1.56
TFB4YPR056W GOS1P38736 223 aa5.32□□□□□ -1.56
TFB4YPR056W YGR201CP42936 225 aa5.32□□□□□ -1.56
TFB4YPR056W YIP1P53039 248 aa5.32□□□□□ -1.56
TFB4YPR056W MRM2P53123 320 aa5.32□□□□□ -1.56
TFB4YPR056W JAC1P53193 184 aa5.32□□□□□ -1.56
TFB4YPR056W CDH1P53197 566 aa5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 66.5 ms