RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.06	□□□□□ -1.92	not detected
CAF20	YOR276W	MSN4	P33749	630 aa		3.06	□□□□□ -1.92
CAF20	YOR276W	YOX1	P34161	385 aa		3.06	□□□□□ -1.92
CAF20	YOR276W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.06	□□□□□ -1.92	not detected
CAF20	YOR276W	YBR062C	P38239	180 aa		3.06	□□□□□ -1.92
CAF20	YOR276W	SDS24	P38314	527 aa		3.06	□□□□□ -1.92
CAF20	YOR276W	RNH201	P53942	307 aa		3.06	□□□□□ -1.92
CAF20	YOR276W	CDC14	Q00684	551 aa		3.06	□□□□□ -1.92
CAF20	YOR276W	SRL4	Q03085	281 aa		3.06	□□□□□ -1.92
CAF20	YOR276W	GMC1	Q04399	608 aa		3.06	□□□□□ -1.92
CAF20	YOR276W	ADH6	Q04894	360 aa	Known RBP	3.06	□□□□□ -1.92
CAF20	YOR276W	YBL111C	Q3E7Y5	667 aa		3.06	□□□□□ -1.92
CAF20	YOR276W	BI3	Q9ZZW7	517 aa		3.06	□□□□□ -1.92
CAF20	YOR276W	MRP1	P10662	321 aa	Known RBP	3.05	□□□□□ -1.92
CAF20	YOR276W	DAL82	P21705	255 aa		3.05	□□□□□ -1.92
CAF20	YOR276W	POF1	P25576	258 aa		3.05	□□□□□ -1.92
CAF20	YOR276W	MRPL6	P32904	214 aa		3.05	□□□□□ -1.92
CAF20	YOR276W	SHE1	P38200	338 aa		3.05	□□□□□ -1.92
CAF20	YOR276W	OM14	P38325	134 aa		3.05	□□□□□ -1.92
CAF20	YOR276W	GAB1	P41733	394 aa		3.05	□□□□□ -1.92
CAF20	YOR276W	IGD1	P43598	195 aa		3.05	□□□□□ -1.92
CAF20	YOR276W	ALG11	P53954	548 aa	Known RBP	3.05	□□□□□ -1.92
CAF20	YOR276W	YNL040W	P53960	456 aa	Predicted RBP	3.05	□□□□□ -1.92
CAF20	YOR276W	YLR446W	Q06204	433 aa		3.05	□□□□□ -1.92
CAF20	YOR276W	RPN8	Q08723	338 aa	Known RBP	3.05	□□□□□ -1.92
CAF20	YOR276W	MMT2	Q08970	484 aa		3.05	□□□□□ -1.92
CAF20	YOR276W	ATG31	Q12421	196 aa		3.05	□□□□□ -1.92
CAF20	YOR276W	LAG2	Q92325	660 aa		3.05	□□□□□ -1.92
CAF20	YOR276W	HIS1	P00498	297 aa	Known RBP	3.04	□□□□□ -1.92
CAF20	YOR276W	BGL2	P15703	313 aa	Known RBP	3.04	□□□□□ -1.92
CAF20	YOR276W	YCR016W	P25617	290 aa	Known RBP	3.04	□□□□□ -1.92
CAF20	YOR276W	BMT2	P38278	337 aa		3.04	□□□□□ -1.92
CAF20	YOR276W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3.04	□□□□□ -1.92	not detected
CAF20	YOR276W	FMC1	P40491	155 aa		3.04	□□□□□ -1.92
CAF20	YOR276W	HIT1	P46973	164 aa		3.04	□□□□□ -1.92
CAF20	YOR276W	TAD2	P47058	250 aa		3.04	□□□□□ -1.92
CAF20	YOR276W	PEX31	P53203	462 aa		3.04	□□□□□ -1.92
CAF20	YOR276W	YNR066C	P53752	436 aa		3.04	□□□□□ -1.92
CAF20	YOR276W	RMI1	Q02685	241 aa		3.04	□□□□□ -1.92
CAF20	YOR276W	MRX11	Q03079	207 aa		3.04	□□□□□ -1.92
CAF20	YOR276W	ADD37	Q03233	198 aa		3.04	□□□□□ -1.92
CAF20	YOR276W	CWC21	Q03375	135 aa	Known RBP	3.04	□□□□□ -1.92
CAF20	YOR276W	DPP1	Q05521	289 aa		3.04	□□□□□ -1.92
CAF20	YOR276W	PEX30	Q06169	523 aa		3.04	□□□□□ -1.92
CAF20	YOR276W	WTM1	Q12363	437 aa	Known RBP	3.04	□□□□□ -1.92
CAF20	YOR276W	ISY1	P21374	235 aa	Predicted RBP	3.03	□□□□□ -1.92
CAF20	YOR276W	NTG1	P31378	399 aa		3.03	□□□□□ -1.92
CAF20	YOR276W	SUA5	P32579	426 aa		3.03	□□□□□ -1.92
CAF20	YOR276W	IES6	P32617	166 aa		3.03	□□□□□ -1.92
CAF20	YOR276W	CYM1	P32898	989 aa		3.03	□□□□□ -1.92
CAF20	YOR276W	CSE1	P33307	960 aa		3.03	□□□□□ -1.92
CAF20	YOR276W	PRS4	P38063	326 aa	Predicted RBP	3.03	□□□□□ -1.92
CAF20	YOR276W	YER085C	P40058	173 aa		3.03	□□□□□ -1.92
CAF20	YOR276W	RTR1	P40084	226 aa	Predicted RBP	3.03	□□□□□ -1.92
CAF20	YOR276W	DDI1	P40087	428 aa		3.03	□□□□□ -1.92
CAF20	YOR276W	YPT32	P51996	222 aa	Known RBP	3.03	□□□□□ -1.92
CAF20	YOR276W	NBP1	P52919	319 aa	Predicted RBP	3.03	□□□□□ -1.92
CAF20	YOR276W	RPL21A	Q02753	160 aa	Known RBP	3.03	□□□□□ -1.92
CAF20	YOR276W	SFH1	Q06168	426 aa		3.03	□□□□□ -1.92
CAF20	YOR276W	CTR3	Q06686	241 aa		3.03	□□□□□ -1.92
CAF20	YOR276W	PAM18	Q07914	168 aa		3.03	□□□□□ -1.92
CAF20	YOR276W	SDO1	Q07953	250 aa	Known RBP	3.03	□□□□□ -1.92
CAF20	YOR276W	SRO7	Q12038	1033 aa		3.03	□□□□□ -1.92
CAF20	YOR276W	YPL245W	Q12179	454 aa	Known RBP	3.03	□□□□□ -1.92
CAF20	YOR276W	YOR114W	Q12219	294 aa		3.03	□□□□□ -1.92
CAF20	YOR276W	BMH2	P34730	273 aa	Known RBP	3.02	□□□□□ -1.93
CAF20	YOR276W	GPX1	P36014	167 aa		3.02	□□□□□ -1.93
CAF20	YOR276W	ATG12	P38316	186 aa		3.02	□□□□□ -1.93
CAF20	YOR276W	DED81	P38707	554 aa	Known RBP	3.02	□□□□□ -1.93
CAF20	YOR276W	TCD1	P38756	429 aa		3.02	□□□□□ -1.93
CAF20	YOR276W	SDS23	P53172	527 aa		3.02	□□□□□ -1.93
CAF20	YOR276W	TPS1	Q00764	495 aa	Known RBP	3.02	□□□□□ -1.93
CAF20	YOR276W	MYO5	Q04439	1219 aa	Known RBP	3.02	□□□□□ -1.93
CAF20	YOR276W	MSH5	Q12175	901 aa		3.02	□□□□□ -1.93
CAF20	YOR276W	RPP0	P05317	312 aa	Known RBP	3.01	□□□□□ -1.93
CAF20	YOR276W	ARG80	P07249	177 aa		3.01	□□□□□ -1.93
CAF20	YOR276W	MATALPHA1	P0CY06	175 aa		3.01	□□□□□ -1.93
CAF20	YOR276W	HMLALPHA1	P0CY07	175 aa		3.01	□□□□□ -1.93
CAF20	YOR276W	IFM1	P25038	676 aa		3.01	□□□□□ -1.93
CAF20	YOR276W	KRE6	P32486	720 aa		3.01	□□□□□ -1.93
CAF20	YOR276W	SRB4	P32569	687 aa		3.01	□□□□□ -1.93
CAF20	YOR276W	CDC13	P32797	924 aa	Known RBP	3.01	□□□□□ -1.93
CAF20	YOR276W	NPT1	P39683	429 aa	Known RBP	3.01	□□□□□ -1.93
CAF20	YOR276W	VAB2	P40003	282 aa		3.01	□□□□□ -1.93
CAF20	YOR276W	TPN1	P53099	579 aa		3.01	□□□□□ -1.93
CAF20	YOR276W	MNT4	P53745	580 aa		3.01	□□□□□ -1.93
CAF20	YOR276W	KTR6	P54070	446 aa		3.01	□□□□□ -1.93
CAF20	YOR276W	INP2	Q03824	705 aa		3.01	□□□□□ -1.93
CAF20	YOR276W	YOR292C	Q08743	309 aa		3.01	□□□□□ -1.93
CAF20	YOR276W	PER33	Q12144	273 aa		3.01	□□□□□ -1.93
CAF20	YOR276W	COX4	P04037	155 aa		3	□□□□□ -1.93
CAF20	YOR276W	RPS3	P05750	240 aa	Known RBP	3	□□□□□ -1.93
CAF20	YOR276W	PRS2	P38620	318 aa	Known RBP	3	□□□□□ -1.93
CAF20	YOR276W	PGU1	P47180	361 aa		3	□□□□□ -1.93
CAF20	YOR276W	YPS5	P53057	165 aa		3	□□□□□ -1.93
CAF20	YOR276W	FMP48	P53233	369 aa		3	□□□□□ -1.93
CAF20	YOR276W	MRPL50	P53724	139 aa		3	□□□□□ -1.93
CAF20	YOR276W	YDR209C	Q03480	137 aa		3	□□□□□ -1.93
CAF20	YOR276W	SEC13	Q04491	297 aa	Known RBP	3	□□□□□ -1.93
CAF20	YOR276W	VIK1	Q12045	647 aa		3	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms