RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN8	YOR261C	AIM29	P36154	155 aa		2.83	□□□□□ -1.96
RPN8	YOR261C	MED8	P38304	223 aa		2.83	□□□□□ -1.96
RPN8	YOR261C	UFD1	P53044	361 aa		2.83	□□□□□ -1.96
RPN8	YOR261C	ABZ2	Q03266	374 aa		2.83	□□□□□ -1.96
RPN8	YOR261C	CSI1	Q04368	295 aa		2.83	□□□□□ -1.96
RPN8	YOR261C	PBP4	Q07362	185 aa	Known RBP	2.83	□□□□□ -1.96
RPN8	YOR261C	LAG2	Q92325	660 aa		2.83	□□□□□ -1.96
RPN8	YOR261C	CDC42	P19073	191 aa		2.82	□□□□□ -1.96
RPN8	YOR261C	PRE7	P23724	241 aa	Known RBP	2.82	□□□□□ -1.96
RPN8	YOR261C	KRR1	P25586	316 aa	Predicted RBP	2.82	□□□□□ -1.96
RPN8	YOR261C	ALK2	P32789	676 aa	Predicted RBP	2.82	□□□□□ -1.96
RPN8	YOR261C	CSE1	P33307	960 aa		2.82	□□□□□ -1.96
RPN8	YOR261C	YPC1	P38298	316 aa		2.82	□□□□□ -1.96
RPN8	YOR261C	CDC40	P40968	455 aa	Predicted RBP	2.82	□□□□□ -1.96
RPN8	YOR261C	HSH155	P49955	971 aa	Known RBP	2.82	□□□□□ -1.96
RPN8	YOR261C	UBC13	P52490	153 aa		2.82	□□□□□ -1.96
RPN8	YOR261C	YLR297W	Q05899	129 aa		2.82	□□□□□ -1.96
RPN8	YOR261C	PFK27	Q12471	397 aa	Predicted RBP	2.82	□□□□□ -1.96
RPN8	YOR261C	YAL063C-A	Q3E791	96 aa		2.82	□□□□□ -1.96
RPN8	YOR261C	YFL064C	P43540	174 aa		2.81	□□□□□ -1.96
RPN8	YOR261C	RIB4	P50861	169 aa	Predicted RBP	2.81	□□□□□ -1.96
RPN8	YOR261C	YGL088W	P53151	121 aa		2.81	□□□□□ -1.96
RPN8	YOR261C	YMR111C	Q04461	462 aa	Predicted RBP	2.81	□□□□□ -1.96
RPN8	YOR261C	YPR1	Q12458	312 aa		2.81	□□□□□ -1.96
RPN8	YOR261C	IFM1	P25038	676 aa		2.8	□□□□□ -1.96
RPN8	YOR261C	IMP3	P32899	183 aa	Predicted RBP	2.8	□□□□□ -1.96
RPN8	YOR261C	MRPL6	P32904	214 aa		2.8	□□□□□ -1.96
RPN8	YOR261C	YDR089W	P38966	869 aa		2.8	□□□□□ -1.96
RPN8	YOR261C	VAB2	P40003	282 aa		2.8	□□□□□ -1.96
RPN8	YOR261C	BUD13	P46947	266 aa	Predicted RBP	2.8	□□□□□ -1.96
RPN8	YOR261C	LIF1	P53150	421 aa		2.8	□□□□□ -1.96
RPN8	YOR261C	YGR266W	P53326	701 aa		2.8	□□□□□ -1.96
RPN8	YOR261C	BIO4	P53630	237 aa		2.8	□□□□□ -1.96
RPN8	YOR261C	DBP6	P53734	629 aa	Known RBP	2.8	□□□□□ -1.96
RPN8	YOR261C	REX3	Q12090	404 aa		2.8	□□□□□ -1.96
RPN8	YOR261C	CAR2	P07991	424 aa	Known RBP	2.79	□□□□□ -1.96
RPN8	YOR261C	RPL31A	P0C2H8	113 aa	Known RBP	2.79	□□□□□ -1.96
RPN8	YOR261C	YCR025C	P25352	136 aa		2.79	□□□□□ -1.96
RPN8	YOR261C	GCG1	P32656	232 aa	Known RBP	2.79	□□□□□ -1.96
RPN8	YOR261C	CDC13	P32797	924 aa	Known RBP	2.79	□□□□□ -1.96
RPN8	YOR261C	TPO5	P36029	618 aa		2.79	□□□□□ -1.96
RPN8	YOR261C	YHL044W	P38727	235 aa		2.79	□□□□□ -1.96
RPN8	YOR261C	PES4	P39684	611 aa		2.79	□□□□□ -1.96
RPN8	YOR261C	ECO1	P43605	281 aa		2.79	□□□□□ -1.96
RPN8	YOR261C	SWC4	P53201	476 aa		2.79	□□□□□ -1.96
RPN8	YOR261C	YPL113C	Q02961	396 aa		2.79	□□□□□ -1.96
RPN8	YOR261C	CUR1	Q06469	252 aa		2.79	□□□□□ -1.96
RPN8	YOR261C	YPL278C	Q08990	100 aa		2.79	□□□□□ -1.96
RPN8	YOR261C	RTC5	Q12108	567 aa	Known RBP	2.79	□□□□□ -1.96
RPN8	YOR261C	TDH2	P00358	332 aa	Known RBP	2.78	□□□□□ -1.96
RPN8	YOR261C	MET2	P08465	486 aa		2.78	□□□□□ -1.96
RPN8	YOR261C	RPL16B	P26785	198 aa	Known RBP	2.78	□□□□□ -1.96
RPN8	YOR261C	MIG1	P27705	504 aa		2.78	□□□□□ -1.96
RPN8	YOR261C	OSW5	P40219	148 aa		2.78	□□□□□ -1.96
RPN8	YOR261C	SYS1	P41544	203 aa		2.78	□□□□□ -1.96
RPN8	YOR261C	ARC18	Q05933	178 aa	Known RBP	2.78	□□□□□ -1.96
RPN8	YOR261C	APC9	Q12107	265 aa		2.78	□□□□□ -1.96
RPN8	YOR261C	IZH4	Q99393	312 aa		2.78	□□□□□ -1.96
RPN8	YOR261C	YAK1	P14680	807 aa		2.77	□□□□□ -1.97
RPN8	YOR261C	PPQ1	P32945	549 aa		2.77	□□□□□ -1.97
RPN8	YOR261C	GDS1	P41913	522 aa		2.77	□□□□□ -1.97
RPN8	YOR261C	OSH6	Q02201	448 aa		2.77	□□□□□ -1.97
RPN8	YOR261C	RLP24	Q07915	199 aa	Known RBP	2.77	□□□□□ -1.97
RPN8	YOR261C	YOL163W	P0CF20	169 aa		2.76	□□□□□ -1.97
RPN8	YOR261C	RPL5	P26321	297 aa	Known RBP	2.76	□□□□□ -1.97
RPN8	YOR261C	UTR5	P32630	166 aa		2.76	□□□□□ -1.97
RPN8	YOR261C	MBA1	P38300	278 aa		2.76	□□□□□ -1.97
RPN8	YOR261C	MNN9	P39107	395 aa	Known RBP	2.76	□□□□□ -1.97
RPN8	YOR261C	LOH1	P47055	219 aa		2.76	□□□□□ -1.97
RPN8	YOR261C	COX16	P47081	118 aa		2.76	□□□□□ -1.97
RPN8	YOR261C	MPP10	P47083	593 aa	Known RBP	2.76	□□□□□ -1.97
RPN8	YOR261C	TAZ1	Q06510	381 aa		2.76	□□□□□ -1.97
RPN8	YOR261C	SIA1	Q12212	622 aa		2.76	□□□□□ -1.97
RPN8	YOR261C	MRX4	Q12467	430 aa		2.76	□□□□□ -1.97
RPN8	YOR261C	GCD2	P12754	651 aa	Predicted RBP	2.75	□□□□□ -1.97
RPN8	YOR261C	KRE1	P17260	313 aa		2.75	□□□□□ -1.97
RPN8	YOR261C	SWD2	P36104	329 aa	Predicted RBP	2.75	□□□□□ -1.97
RPN8	YOR261C	MRPL3	P36516	390 aa		2.75	□□□□□ -1.97
RPN8	YOR261C	YER084W	P40057	128 aa		2.75	□□□□□ -1.97
RPN8	YOR261C	YIL012W	P40551	113 aa		2.75	□□□□□ -1.97
RPN8	YOR261C	LOC1	P43586	204 aa	Predicted RBP	2.75	□□□□□ -1.97
RPN8	YOR261C	PRP24	P49960	444 aa	Known RBP	2.75	□□□□□ -1.97
RPN8	YOR261C	VOA1	P53262	265 aa		2.75	□□□□□ -1.97
RPN8	YOR261C	PEX30	Q06169	523 aa		2.75	□□□□□ -1.97
RPN8	YOR261C	VAC14	Q06708	880 aa		2.75	□□□□□ -1.97
RPN8	YOR261C	SAR1	P20606	190 aa	Known RBP	2.74	□□□□□ -1.97
RPN8	YOR261C	RSA4	P25382	515 aa	Known RBP	2.74	□□□□□ -1.97
RPN8	YOR261C	POP2	P39008	433 aa		2.74	□□□□□ -1.97
RPN8	YOR261C	YPT32	P51996	222 aa	Known RBP	2.74	□□□□□ -1.97
RPN8	YOR261C	YDR114C	Q04597	100 aa		2.74	□□□□□ -1.97
RPN8	YOR261C	RRG8	Q06109	277 aa		2.74	□□□□□ -1.97
RPN8	YOR261C	STF1	P01098	86 aa		2.73	□□□□□ -1.97
RPN8	YOR261C	RAD7	P06779	565 aa		2.73	□□□□□ -1.97
RPN8	YOR261C	PHO80	P20052	293 aa		2.73	□□□□□ -1.97
RPN8	YOR261C	IMP1	P28627	190 aa		2.73	□□□□□ -1.97
RPN8	YOR261C	AEP1	P32493	518 aa		2.73	□□□□□ -1.97
RPN8	YOR261C	YKL063C	P35725	167 aa		2.73	□□□□□ -1.97
RPN8	YOR261C	YDL144C	Q07589	356 aa		2.73	□□□□□ -1.97
RPN8	YOR261C	CLP1	Q08685	445 aa	Predicted RBP	2.73	□□□□□ -1.97
RPN8	YOR261C	PRR2	Q12310	699 aa		2.73	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms