RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W RPL18BP0CX50 186 aaKnown RBP2.68□□□□□ -1.98
VAM3YOR106W YGP1P38616 354 aaKnown RBP2.68□□□□□ -1.98
VAM3YOR106W YPL278CQ08990 100 aa2.68□□□□□ -1.98
VAM3YOR106W GAL3P13045 520 aa2.67□□□□□ -1.98
VAM3YOR106W IFM1P25038 676 aa2.67□□□□□ -1.98
VAM3YOR106W VPH1P32563 840 aaKnown RBP2.67□□□□□ -1.98
VAM3YOR106W GPX1P36014 167 aa2.67□□□□□ -1.98
VAM3YOR106W YIL012WP40551 113 aa2.67□□□□□ -1.98
VAM3YOR106W INA22P40576 216 aa2.67□□□□□ -1.98
VAM3YOR106W YFL040WP43562 540 aa2.67□□□□□ -1.98
VAM3YOR106W PFK27Q12471 397 aaPredicted RBP2.67□□□□□ -1.98
VAM3YOR106W DCP1Q12517 231 aaPredicted RBP2.67□□□□□ -1.98
VAM3YOR106W SNF6P18888 332 aa2.66□□□□□ -1.98
VAM3YOR106W CDC13P32797 924 aaKnown RBP2.66□□□□□ -1.98
VAM3YOR106W YHL044WP38727 235 aa2.66□□□□□ -1.98
VAM3YOR106W UTP25P40498 721 aaKnown RBP2.66□□□□□ -1.98
VAM3YOR106W LIF1P53150 421 aa2.66□□□□□ -1.98
VAM3YOR106W SPT7P35177 1332 aa2.66□□□□□ -1.98
VAM3YOR106W YBL081WP38180 368 aaKnown RBP2.65□□□□□ -1.99
VAM3YOR106W YFL064CP43540 174 aa2.65□□□□□ -1.99
VAM3YOR106W PRP24P49960 444 aaKnown RBP2.65□□□□□ -1.99
VAM3YOR106W SYF2P53277 215 aaPredicted RBP2.65□□□□□ -1.99
VAM3YOR106W YLR446WQ06204 433 aa2.65□□□□□ -1.99
VAM3YOR106W SWI3P32591 825 aa2.64□□□□□ -1.99
VAM3YOR106W CAB3P36076 571 aa2.64□□□□□ -1.99
VAM3YOR106W UIP5P36137 443 aa2.64□□□□□ -1.99
VAM3YOR106W OKP1P53298 406 aa2.64□□□□□ -1.99
VAM3YOR106W RSM27P53305 110 aa2.64□□□□□ -1.99
VAM3YOR106W YNL095CP53932 642 aa2.64□□□□□ -1.99
VAM3YOR106W OSH6Q02201 448 aa2.64□□□□□ -1.99
VAM3YOR106W SAM4Q08985 325 aaKnown RBP2.64□□□□□ -1.99
VAM3YOR106W TIM22Q12328 207 aa2.64□□□□□ -1.99
VAM3YOR106W YAL063C-AQ3E791 96 aa2.64□□□□□ -1.99
VAM3YOR106W RPL16BP26785 198 aaKnown RBP2.63□□□□□ -1.99
VAM3YOR106W IMP1P28627 190 aa2.63□□□□□ -1.99
VAM3YOR106W YPS1P32329 569 aa2.63□□□□□ -1.99
VAM3YOR106W GCG1P32656 232 aaKnown RBP2.63□□□□□ -1.99
VAM3YOR106W MCH2P36032 473 aa2.63□□□□□ -1.99
VAM3YOR106W MRPL3P36516 390 aa2.63□□□□□ -1.99
VAM3YOR106W MED6P38782 295 aa2.63□□□□□ -1.99
VAM3YOR106W YER188WP40103 239 aa2.63□□□□□ -1.99
VAM3YOR106W YGR266WP53326 701 aa2.63□□□□□ -1.99
VAM3YOR106W BLI1P35727 113 aa2.62□□□□□ -1.99
VAM3YOR106W TPO5P36029 618 aa2.62□□□□□ -1.99
VAM3YOR106W YKL162CP36052 402 aa2.62□□□□□ -1.99
VAM3YOR106W NAS2P40555 220 aa2.62□□□□□ -1.99
VAM3YOR106W SYS1P41544 203 aa2.62□□□□□ -1.99
VAM3YOR106W MIG2P53035 382 aa2.62□□□□□ -1.99
VAM3YOR106W SWC4P53201 476 aa2.62□□□□□ -1.99
VAM3YOR106W IZH4Q99393 312 aa2.62□□□□□ -1.99
VAM3YOR106W YBR062CP38239 180 aa2.61□□□□□ -1.99
VAM3YOR106W KRE29P40026 464 aa2.61□□□□□ -1.99
VAM3YOR106W ALG9P53868 555 aaKnown RBP2.61□□□□□ -1.99
VAM3YOR106W NNT1Q05874 261 aa2.61□□□□□ -1.99
VAM3YOR106W STE23Q06010 1027 aa2.61□□□□□ -1.99
VAM3YOR106W PBP4Q07362 185 aaKnown RBP2.61□□□□□ -1.99
VAM3YOR106W YPR1Q12458 312 aa2.61□□□□□ -1.99
VAM3YOR106W MNN5P46982 586 aa2.6□□□□□ -1.99
VAM3YOR106W PRR2Q12310 699 aa2.6□□□□□ -1.99
VAM3YOR106W PHO80P20052 293 aa2.59□□□□□ -1.99
VAM3YOR106W YCR025CP25352 136 aa2.59□□□□□ -1.99
VAM3YOR106W YPC1P38298 316 aa2.59□□□□□ -1.99
VAM3YOR106W AVT6P40074 448 aa2.59□□□□□ -1.99
VAM3YOR106W PCL7P40186 285 aa2.59□□□□□ -1.99
VAM3YOR106W RRP42Q12277 265 aaPredicted RBP2.59□□□□□ -1.99
VAM3YOR106W CDC37P06101 506 aaKnown RBP2.58□□□□□ -2
VAM3YOR106W MBA1P38300 278 aa2.58□□□□□ -2
VAM3YOR106W AIM20P40451 204 aa2.58□□□□□ -2
VAM3YOR106W UBC13P52490 153 aa2.58□□□□□ -2
VAM3YOR106W CAB5Q03941 241 aa2.58□□□□□ -2
VAM3YOR106W YDL144CQ07589 356 aa2.58□□□□□ -2
VAM3YOR106W RRT12P25381 491 aa2.57□□□□□ -2
VAM3YOR106W IMP3P32899 183 aaPredicted RBP2.57□□□□□ -2
VAM3YOR106W END3P39013 349 aa2.57□□□□□ -2
VAM3YOR106W VAB2P40003 282 aa2.57□□□□□ -2
VAM3YOR106W ZWF1P11412 505 aaKnown RBP2.56□□□□□ -2
VAM3YOR106W TRM7P38238 310 aaKnown RBP2.56□□□□□ -2
VAM3YOR106W FET3P38993 636 aa2.56□□□□□ -2
VAM3YOR106W YLR297WQ05899 129 aa2.56□□□□□ -2
VAM3YOR106W APC9Q12107 265 aa2.56□□□□□ -2
VAM3YOR106W HIS3P06633 220 aa2.55□□□□□ -2
VAM3YOR106W RPL31AP0C2H8 113 aaKnown RBP2.55□□□□□ -2
VAM3YOR106W SWC5P38326 303 aa2.55□□□□□ -2
VAM3YOR106W CAJ1P39101 391 aa2.55□□□□□ -2
VAM3YOR106W SSU72P53538 206 aaPredicted RBP2.55□□□□□ -2
VAM3YOR106W BIO4P53630 237 aa2.55□□□□□ -2
VAM3YOR106W MRS2Q01926 470 aa2.55□□□□□ -2
VAM3YOR106W PAA1Q12447 191 aaKnown RBP2.55□□□□□ -2
VAM3YOR106W YPR064WQ12492 139 aa2.55□□□□□ -2
VAM3YOR106W OSM1P21375 501 aaKnown RBP2.54□□□□□ -2
VAM3YOR106W SWT21P53873 357 aaPredicted RBP2.54□□□□□ -2
VAM3YOR106W TVP15Q03860 143 aa2.54□□□□□ -2
VAM3YOR106W YLL007CQ07799 665 aa2.54□□□□□ -2
VAM3YOR106W PET18P25362 215 aa2.53□□□□□ -2
VAM3YOR106W SSO2P39926 295 aa2.53□□□□□ -2
VAM3YOR106W GDS1P41913 522 aa2.53□□□□□ -2
VAM3YOR106W COX16P47081 118 aa2.53□□□□□ -2
VAM3YOR106W DSK2P48510 373 aa2.53□□□□□ -2
VAM3YOR106W NUP157P40064 1391 aaKnown RBP2.52□□□□□ -2.01
VAM3YOR106W RAD7P06779 565 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 66.4 ms