RNA–Protein interactions for RNA: YOR053W

YOR053W, Transcript of Dubious open reading frame, yeast

Gene YOR053W, Length 342 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YOR053W	YOR053W	YJL027C	P47063	138 aa	Predicted RBP	0.92	□□□□□ -2.26
YOR053W	YOR053W	YGR266W	P53326	701 aa		0.92	□□□□□ -2.26
YOR053W	YOR053W	GRH1	Q04410	372 aa	Known RBP	0.92	□□□□□ -2.26
YOR053W	YOR053W	YLR012C	Q07927	99 aa		0.92	□□□□□ -2.26
YOR053W	YOR053W	YLL053C	P0CD98	152 aa		0.91	□□□□□ -2.26
YOR053W	YOR053W	YCR025C	P25352	136 aa		0.91	□□□□□ -2.26
YOR053W	YOR053W	COY1	P34237	679 aa		0.91	□□□□□ -2.26
YOR053W	YOR053W	TRM7	P38238	310 aa	Known RBP	0.91	□□□□□ -2.26
YOR053W	YOR053W	YBR062C	P38239	180 aa		0.91	□□□□□ -2.26
YOR053W	YOR053W	YFL064C	P43540	174 aa		0.91	□□□□□ -2.26
YOR053W	YOR053W	RSM27	P53305	110 aa		0.91	□□□□□ -2.26
YOR053W	YOR053W	SXM1	Q04175	944 aa	Known RBP	0.91	□□□□□ -2.26
YOR053W	YOR053W	SPO77	Q06134	477 aa		0.91	□□□□□ -2.26
YOR053W	YOR053W	CTS2	Q06350	511 aa		0.91	□□□□□ -2.26
YOR053W	YOR053W	DPM1	P14020	267 aa	Known RBP	0.9	□□□□□ -2.27
YOR053W	YOR053W	RBK1	P25332	333 aa		0.9	□□□□□ -2.27
YOR053W	YOR053W	LRP1	P38801	184 aa	Known RBP	0.9	□□□□□ -2.27
YOR053W	YOR053W	BTT1	P40314	149 aa	Predicted RBP	0.9	□□□□□ -2.27
YOR053W	YOR053W	TAF6	P53040	516 aa		0.9	□□□□□ -2.27
YOR053W	YOR053W	SLM2	P53955	656 aa		0.9	□□□□□ -2.27
YOR053W	YOR053W	AGC1	Q12482	902 aa		0.9	□□□□□ -2.27
YOR053W	YOR053W	RGS2	Q99188	309 aa		0.9	□□□□□ -2.27
YOR053W	YOR053W	GDT1	P38301	280 aa	Predicted RBP	0.89	□□□□□ -2.27
YOR053W	YOR053W	ALP1	P38971	573 aa		0.89	□□□□□ -2.27
YOR053W	YOR053W	SOP4	P39543	234 aa	Predicted RBP	0.89	□□□□□ -2.27
YOR053W	YOR053W	LSM4	P40070	187 aa	Known RBP	0.89	□□□□□ -2.27
YOR053W	YOR053W	LIF1	P53150	421 aa		0.89	□□□□□ -2.27
YOR053W	YOR053W	NNT1	Q05874	261 aa		0.89	□□□□□ -2.27
YOR053W	YOR053W	YPL150W	Q12152	901 aa		0.89	□□□□□ -2.27
YOR053W	YOR053W	MBA1	P38300	278 aa		0.88	□□□□□ -2.27
YOR053W	YOR053W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	0.88	□□□□□ -2.27	not detected
YOR053W	YOR053W	PRP39	P39682	629 aa	Known RBP	0.88	□□□□□ -2.27
YOR053W	YOR053W	PES4	P39684	611 aa		0.88	□□□□□ -2.27
YOR053W	YOR053W	RPA34	P47006	233 aa	Predicted RBP	0.88	□□□□□ -2.27
YOR053W	YOR053W	PRP24	P49960	444 aa	Known RBP	0.88	□□□□□ -2.27
YOR053W	YOR053W	TPN1	P53099	579 aa		0.88	□□□□□ -2.27
YOR053W	YOR053W	COS6	P53344	381 aa		0.88	□□□□□ -2.27
YOR053W	YOR053W	FCF1	Q05498	189 aa	Predicted RBP	0.88	□□□□□ -2.27
YOR053W	YOR053W	STE3	P06783	470 aa		0.87	□□□□□ -2.27
YOR053W	YOR053W	GAL7	P08431	366 aa		0.87	□□□□□ -2.27
YOR053W	YOR053W	IMP1	P28627	190 aa		0.87	□□□□□ -2.27
YOR053W	YOR053W	CDC13	P32797	924 aa	Known RBP	0.87	□□□□□ -2.27
YOR053W	YOR053W	MRPL3	P36516	390 aa		0.87	□□□□□ -2.27
YOR053W	YOR053W	SEC28	P40509	296 aa	Known RBP	0.87	□□□□□ -2.27
YOR053W	YOR053W	OST3	P48439	350 aa		0.87	□□□□□ -2.27
YOR053W	YOR053W	TVP15	Q03860	143 aa		0.87	□□□□□ -2.27
YOR053W	YOR053W	RTC5	Q12108	567 aa	Known RBP	0.87	□□□□□ -2.27
YOR053W	YOR053W	ATG5	Q12380	294 aa		0.87	□□□□□ -2.27
YOR053W	YOR053W	SPO24	Q3E752	67 aa		0.87	□□□□□ -2.27
YOR053W	YOR053W	SPL2	P38839	148 aa		0.86	□□□□□ -2.27
YOR053W	YOR053W	AVT6	P40074	448 aa		0.86	□□□□□ -2.27
YOR053W	YOR053W	YNL143C	P53908	130 aa		0.86	□□□□□ -2.27
YOR053W	YOR053W	LAG2	Q92325	660 aa		0.86	□□□□□ -2.27
YOR053W	YOR053W	VMA5	P31412	392 aa	Known RBP	0.85	□□□□□ -2.27
YOR053W	YOR053W	SUR2	P38992	349 aa		0.85	□□□□□ -2.27
YOR053W	YOR053W	YFL040W	P43562	540 aa		0.85	□□□□□ -2.27
YOR053W	YOR053W	YLR446W	Q06204	433 aa		0.85	□□□□□ -2.27
YOR053W	YOR053W	EMC6	Q12431	108 aa		0.85	□□□□□ -2.27
YOR053W	YOR053W	TDH1	P00360	332 aa	Known RBP	0.84	□□□□□ -2.27
YOR053W	YOR053W	RAD10	P06838	210 aa		0.84	□□□□□ -2.27
YOR053W	YOR053W	ACB1	P31787	87 aa		0.84	□□□□□ -2.27
YOR053W	YOR053W	GCG1	P32656	232 aa	Known RBP	0.84	□□□□□ -2.27
YOR053W	YOR053W	ADH5	P38113	351 aa	Known RBP	0.84	□□□□□ -2.27
YOR053W	YOR053W	YHR045W	P38775	560 aa		0.84	□□□□□ -2.27
YOR053W	YOR053W	MND1	P53102	219 aa		0.84	□□□□□ -2.27
YOR053W	YOR053W	SNX41	Q04053	625 aa		0.84	□□□□□ -2.27
YOR053W	YOR053W	YDL144C	Q07589	356 aa		0.84	□□□□□ -2.27
YOR053W	YOR053W	YOR268C	Q08734	132 aa		0.84	□□□□□ -2.27
YOR053W	YOR053W	PUP2	P32379	260 aa		0.83	□□□□□ -2.28
YOR053W	YOR053W	YGR016W	P53209	190 aa		0.83	□□□□□ -2.28
YOR053W	YOR053W	RSC1	P53236	928 aa		0.83	□□□□□ -2.28
YOR053W	YOR053W	SWT21	P53873	357 aa	Predicted RBP	0.83	□□□□□ -2.28
YOR053W	YOR053W	EBS1	Q03466	884 aa	Known RBP	0.83	□□□□□ -2.28
YOR053W	YOR053W	PAN1	P32521	1480 aa		0.83	□□□□□ -2.28
YOR053W	YOR053W	YOR062C	P36025	268 aa		0.82	□□□□□ -2.28
YOR053W	YOR053W	TPO5	P36029	618 aa		0.82	□□□□□ -2.28
YOR053W	YOR053W	DAD2	P36162	133 aa		0.82	□□□□□ -2.28
YOR053W	YOR053W	VAB2	P40003	282 aa		0.82	□□□□□ -2.28
YOR053W	YOR053W	KRE29	P40026	464 aa		0.82	□□□□□ -2.28
YOR053W	YOR053W	CAB4	P53332	305 aa		0.82	□□□□□ -2.28
YOR053W	YOR053W	MRS2	Q01926	470 aa		0.82	□□□□□ -2.28
YOR053W	YOR053W	IRC4	Q03036	179 aa		0.82	□□□□□ -2.28
YOR053W	YOR053W	RVB1	Q03940	463 aa	Known RBP	0.82	□□□□□ -2.28
YOR053W	YOR053W	BUR2	Q05949	395 aa		0.82	□□□□□ -2.28
YOR053W	YOR053W	UTP23	Q12339	254 aa	Known RBP	0.82	□□□□□ -2.28
YOR053W	YOR053W	YCR102C	P25608	368 aa		0.81	□□□□□ -2.28
YOR053W	YOR053W	MCH2	P36032	473 aa		0.81	□□□□□ -2.28
YOR053W	YOR053W	MRPL49	P40858	161 aa	Predicted RBP	0.81	□□□□□ -2.28
YOR053W	YOR053W	YGL114W	P53134	725 aa		0.81	□□□□□ -2.28
YOR053W	YOR053W	YNL146W	P53906	100 aa		0.81	□□□□□ -2.28
YOR053W	YOR053W	YLL007C	Q07799	665 aa		0.81	□□□□□ -2.28
YOR053W	YOR053W	IFM1	P25038	676 aa		0.8	□□□□□ -2.28
YOR053W	YOR053W	YPC1	P38298	316 aa		0.8	□□□□□ -2.28
YOR053W	YOR053W	COG3	P40094	801 aa		0.8	□□□□□ -2.28
YOR053W	YOR053W	AVT7	P40501	490 aa		0.8	□□□□□ -2.28
YOR053W	YOR053W	YGR168C	P53293	376 aa		0.8	□□□□□ -2.28
YOR053W	YOR053W	YDR262W	Q12331	272 aa		0.8	□□□□□ -2.28
YOR053W	YOR053W	FRE6	Q12473	712 aa		0.8	□□□□□ -2.28
YOR053W	YOR053W	SKS1	Q12505	502 aa		0.8	□□□□□ -2.28
YOR053W	YOR053W	YPL247C	Q12523	523 aa		0.8	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 94.1 ms