RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF120YNL278W WBP1P33767 430 aaKnown RBP2.54□□□□□ -2
CAF120YNL278W RPF2P36160 344 aaKnown RBP2.54□□□□□ -2
CAF120YNL278W AIM2P39721 246 aa2.54□□□□□ -2
CAF120YNL278W GIP2P40036 548 aa2.54□□□□□ -2
CAF120YNL278W SHR5P41912 237 aa2.54□□□□□ -2
CAF120YNL278W GDS1P41913 522 aa2.54□□□□□ -2
CAF120YNL278W HOC1P47124 396 aa2.54□□□□□ -2
CAF120YNL278W GLO1P50107 326 aa2.54□□□□□ -2
CAF120YNL278W YGL114WP53134 725 aa2.54□□□□□ -2
CAF120YNL278W YGR015CP53208 328 aa2.54□□□□□ -2
CAF120YNL278W PCP1P53259 346 aa2.54□□□□□ -2
CAF120YNL278W YNL010WP53981 241 aaKnown RBP2.54□□□□□ -2
CAF120YNL278W SNU56Q03782 492 aaKnown RBP2.54□□□□□ -2
CAF120YNL278W TRI1Q05024 226 aa2.54□□□□□ -2
CAF120YNL278W RQC1Q05468 723 aaKnown RBP2.54□□□□□ -2
CAF120YNL278W YDR278CQ05612 105 aa2.54□□□□□ -2
CAF120YNL278W YLR283WQ05867 314 aa2.54□□□□□ -2
CAF120YNL278W ACM1Q08981 209 aa2.54□□□□□ -2
CAF120YNL278W YLL058WQ12198 575 aa2.54□□□□□ -2
CAF120YNL278W YLR108CQ12259 485 aa2.54□□□□□ -2
CAF120YNL278W RIB2Q12362 591 aaKnown RBP2.54□□□□□ -2
CAF120YNL278W NDJ1Q12366 352 aa2.54□□□□□ -2
CAF120YNL278W MDN1Q12019 4910 aaKnown RBP2.54□□□□□ -2
CAF120YNL278W RHO1P06780 209 aaKnown RBP2.54□□□□□ -2
CAF120YNL278W MEK1P24719 497 aaPredicted RBP2.54□□□□□ -2
CAF120YNL278W CWP1P28319 239 aa2.54□□□□□ -2
CAF120YNL278W LAC1P28496 418 aa2.54□□□□□ -2
CAF120YNL278W PRO1P32264 428 aa2.54□□□□□ -2
CAF120YNL278W CYS4P32582 507 aaKnown RBP2.54□□□□□ -2
CAF120YNL278W YCR087C-AP37263 153 aa2.54□□□□□ -2
CAF120YNL278W MSS4P38994 779 aa2.54□□□□□ -2
CAF120YNL278W BDH1P39714 382 aa2.54□□□□□ -2
CAF120YNL278W RBG1P39729 369 aa2.54□□□□□ -2
CAF120YNL278W YEL028WP39989 153 aa2.54□□□□□ -2
CAF120YNL278W YEL020CP39994 560 aa2.54□□□□□ -2
CAF120YNL278W YIR007WP40566 764 aa2.54□□□□□ -2
CAF120YNL278W YJR149WP47177 404 aa2.54□□□□□ -2
CAF120YNL278W IMO32P53219 342 aa2.54□□□□□ -2
CAF120YNL278W SPC98P53540 846 aa2.54□□□□□ -2
CAF120YNL278W YMR160WQ03823 816 aa2.54□□□□□ -2
CAF120YNL278W FIN1Q03898 291 aa2.54□□□□□ -2
CAF120YNL278W CTK1Q03957 528 aaKnown RBP2.54□□□□□ -2
CAF120YNL278W RAX1Q08760 435 aa2.54□□□□□ -2
CAF120YNL278W NDD1Q08887 554 aa2.54□□□□□ -2
CAF120YNL278W PRS5Q12265 496 aaKnown RBP2.54□□□□□ -2
CAF120YNL278W MRX4Q12467 430 aa2.54□□□□□ -2
CAF120YNL278W CYC1P00044 109 aaPredicted RBP2.53□□□□□ -2
CAF120YNL278W DST1P07273 309 aa2.53□□□□□ -2
CAF120YNL278W PET9P18239 318 aaKnown RBP2.53□□□□□ -2
CAF120YNL278W PRR1P28708 518 aa2.53□□□□□ -2
CAF120YNL278W HXT3P32466 567 aaKnown RBP2.53□□□□□ -2
CAF120YNL278W VID24P38263 362 aa2.53□□□□□ -2
CAF120YNL278W TVP23P38962 199 aa2.53□□□□□ -2
CAF120YNL278W SRP14P38985 146 aa2.53□□□□□ -2
CAF120YNL278W RGI1P40043 161 aaPredicted RBP2.53□□□□□ -2
CAF120YNL278W GSM1P42950 618 aa2.53□□□□□ -2
CAF120YNL278W YHC3P47040 408 aa2.53□□□□□ -2
CAF120YNL278W MTL1P53214 551 aa2.53□□□□□ -2
CAF120YNL278W NRD1P53617 575 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
CAF120YNL278W SKO1Q02100 647 aa2.53□□□□□ -2
CAF120YNL278W RNY1Q02933 434 aaKnown RBP2.53□□□□□ -2
CAF120YNL278W SSY1Q03770 852 aa2.53□□□□□ -2
CAF120YNL278W FRE5Q08908 694 aa2.53□□□□□ -2
CAF120YNL278W RUP1Q12242 671 aa2.53□□□□□ -2
CAF120YNL278W ATG31Q12421 196 aa2.53□□□□□ -2
CAF120YNL278W PNO1Q99216 274 aaKnown RBP2.53□□□□□ -2
CAF120YNL278W CCH1P50077 2039 aa2.53□□□□□ -2
CAF120YNL278W PRP18P33411 251 aaPredicted RBP2.53□□□□□ -2
CAF120YNL278W HIS7P33734 552 aaKnown RBP2.53□□□□□ -2
CAF120YNL278W YKL077WP36081 392 aa2.53□□□□□ -2
CAF120YNL278W MRPL36P36531 177 aa2.53□□□□□ -2
CAF120YNL278W AIM3P38266 947 aaKnown RBP2.53□□□□□ -2
CAF120YNL278W DER1P38307 211 aa2.53□□□□□ -2
CAF120YNL278W GUF1P46943 645 aa2.53□□□□□ -2
CAF120YNL278W RPA34P47006 233 aaPredicted RBP2.53□□□□□ -2
CAF120YNL278W AIM23P47015 356 aa2.53□□□□□ -2
CAF120YNL278W AIM22P47051 409 aa2.53□□□□□ -2
CAF120YNL278W UBC12P52491 188 aa2.53□□□□□ -2
CAF120YNL278W SBH2P52871 88 aa2.53□□□□□ -2
CAF120YNL278W YNL033WP53964 284 aa2.53□□□□□ -2
CAF120YNL278W YNL019CP53975 284 aa2.53□□□□□ -2
CAF120YNL278W YKR011CQ02209 353 aa2.53□□□□□ -2
CAF120YNL278W RIM13Q03792 727 aa2.53□□□□□ -2
CAF120YNL278W YMR034CQ05131 434 aaPredicted RBP2.53□□□□□ -2
CAF120YNL278W YLR036CQ07986 203 aa2.53□□□□□ -2
CAF120YNL278W EMP46Q12396 444 aa2.53□□□□□ -2
CAF120YNL278W WIP1Q2V2P8 89 aa2.53□□□□□ -2
CAF120YNL278W ILV5P06168 395 aaKnown RBP2.53□□□□□ -2.01
CAF120YNL278W CDC21P06785 304 aa2.53□□□□□ -2.01
CAF120YNL278W YGL041W-AP0C5N3 154 aa2.53□□□□□ -2.01
CAF120YNL278W MSS1P32559 526 aaPredicted RBP2.53□□□□□ -2.01
CAF120YNL278W CBT1P36038 271 aaPredicted RBP2.53□□□□□ -2.01
CAF120YNL278W ANR2P36090 516 aaPredicted RBP2.53□□□□□ -2.01
CAF120YNL278W MRPL4P36517 319 aa2.53□□□□□ -2.01
CAF120YNL278W YBL029WP38201 376 aa2.53□□□□□ -2.01
CAF120YNL278W YBP1P38315 674 aa2.53□□□□□ -2.01
CAF120YNL278W POG1P40473 351 aa2.53□□□□□ -2.01
CAF120YNL278W LYS12P40495 371 aaKnown RBP2.53□□□□□ -2.01
CAF120YNL278W BAP3P41815 604 aa2.53□□□□□ -2.01
CAF120YNL278W PMT6P42934 759 aa2.53□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms