RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeast

Gene SUB1, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB1	YMR039C	ARO4	P32449	370 aa	Known RBP	2.63	□□□□□ -1.99
SUB1	YMR039C	IMP3	P32899	183 aa	Predicted RBP	2.63	□□□□□ -1.99
SUB1	YMR039C	YHR045W	P38775	560 aa		2.63	□□□□□ -1.99
SUB1	YMR039C	SMF2	P38778	549 aa		2.63	□□□□□ -1.99
SUB1	YMR039C	PRM9	P39551	298 aa		2.63	□□□□□ -1.99
SUB1	YMR039C	YGR067C	P53243	804 aa		2.63	□□□□□ -1.99
SUB1	YMR039C	YDR115W	Q04598	105 aa		2.63	□□□□□ -1.99
SUB1	YMR039C	ADH6	Q04894	360 aa	Known RBP	2.63	□□□□□ -1.99
SUB1	YMR039C	SLM3	Q12093	417 aa		2.63	□□□□□ -1.99
SUB1	YMR039C	PRM4	Q12498	284 aa		2.63	□□□□□ -1.99
SUB1	YMR039C	SAC3	P46674	1301 aa		2.63	□□□□□ -1.99
SUB1	YMR039C	REP1	P03871	373 aa		2.62	□□□□□ -1.99
SUB1	YMR039C	RPS19A	P07280	144 aa	Known RBP	2.62	□□□□□ -1.99
SUB1	YMR039C	RPS19B	P07281	144 aa	Predicted RBP	2.62	□□□□□ -1.99
SUB1	YMR039C	RPL31A	P0C2H8	113 aa	Known RBP	2.62	□□□□□ -1.99
SUB1	YMR039C	MET16	P18408	261 aa	Predicted RBP	2.62	□□□□□ -1.99
SUB1	YMR039C	VPS1	P21576	704 aa	Known RBP	2.62	□□□□□ -1.99
SUB1	YMR039C	MIR1	P23641	311 aa	Known RBP	2.62	□□□□□ -1.99
SUB1	YMR039C	VPS3	P23643	1011 aa		2.62	□□□□□ -1.99
SUB1	YMR039C	CHA1	P25379	360 aa	Known RBP	2.62	□□□□□ -1.99
SUB1	YMR039C	RPL16B	P26785	198 aa	Known RBP	2.62	□□□□□ -1.99
SUB1	YMR039C	LDS1	P31379	325 aa		2.62	□□□□□ -1.99
SUB1	YMR039C	SUA5	P32579	426 aa		2.62	□□□□□ -1.99
SUB1	YMR039C	BMH2	P34730	273 aa	Known RBP	2.62	□□□□□ -1.99
SUB1	YMR039C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	2.62	□□□□□ -1.99	not detected
SUB1	YMR039C	YKL063C	P35725	167 aa		2.62	□□□□□ -1.99
SUB1	YMR039C	YKT6	P36015	200 aa	Known RBP	2.62	□□□□□ -1.99
SUB1	YMR039C	RPC37	P36121	282 aa		2.62	□□□□□ -1.99
SUB1	YMR039C	YER085C	P40058	173 aa		2.62	□□□□□ -1.99
SUB1	YMR039C	RTR1	P40084	226 aa	Predicted RBP	2.62	□□□□□ -1.99
SUB1	YMR039C	YIA6	P40556	373 aa		2.62	□□□□□ -1.99
SUB1	YMR039C	MOB2	P43563	287 aa		2.62	□□□□□ -1.99
SUB1	YMR039C	BIO3	P50277	480 aa		2.62	□□□□□ -1.99
SUB1	YMR039C	MNT4	P53745	580 aa		2.62	□□□□□ -1.99
SUB1	YMR039C	VAC7	P53950	1165 aa		2.62	□□□□□ -1.99
SUB1	YMR039C	SNX41	Q04053	625 aa		2.62	□□□□□ -1.99
SUB1	YMR039C	FSH2	Q05015	223 aa		2.62	□□□□□ -1.99
SUB1	YMR039C	YLR283W	Q05867	314 aa		2.62	□□□□□ -1.99
SUB1	YMR039C	YLR177W	Q06251	628 aa		2.62	□□□□□ -1.99
SUB1	YMR039C	ASR1	Q06834	288 aa		2.62	□□□□□ -1.99
SUB1	YMR039C	FRE8	Q12209	686 aa		2.62	□□□□□ -1.99
SUB1	YMR039C	UTP23	Q12339	254 aa	Known RBP	2.62	□□□□□ -1.99
SUB1	YMR039C	RPN6	Q12377	434 aa		2.62	□□□□□ -1.99
SUB1	YMR039C	MRP1	P10662	321 aa	Known RBP	2.61	□□□□□ -1.99
SUB1	YMR039C	CDC42	P19073	191 aa		2.61	□□□□□ -1.99
SUB1	YMR039C	DAL82	P21705	255 aa		2.61	□□□□□ -1.99
SUB1	YMR039C	IFM1	P25038	676 aa		2.61	□□□□□ -1.99
SUB1	YMR039C	YCR016W	P25617	290 aa	Known RBP	2.61	□□□□□ -1.99
SUB1	YMR039C	SRB4	P32569	687 aa		2.61	□□□□□ -1.99
SUB1	YMR039C	PDC2	P32896	925 aa		2.61	□□□□□ -1.99
SUB1	YMR039C	MSN4	P33749	630 aa		2.61	□□□□□ -1.99
SUB1	YMR039C	KTI12	P34253	313 aa	Known RBP	2.61	□□□□□ -1.99
SUB1	YMR039C	MCH2	P36032	473 aa		2.61	□□□□□ -1.99
SUB1	YMR039C	PRS4	P38063	326 aa	Predicted RBP	2.61	□□□□□ -1.99
SUB1	YMR039C	YBR241C	P38142	488 aa		2.61	□□□□□ -1.99
SUB1	YMR039C	RCK2	P38623	610 aa		2.61	□□□□□ -1.99
SUB1	YMR039C	NPT1	P39683	429 aa	Known RBP	2.61	□□□□□ -1.99
SUB1	YMR039C	DDI1	P40087	428 aa		2.61	□□□□□ -1.99
SUB1	YMR039C	COA1	P40452	197 aa		2.61	□□□□□ -1.99
SUB1	YMR039C	SLM1	P40485	686 aa		2.61	□□□□□ -1.99
SUB1	YMR039C	SHQ1	P40486	507 aa	Predicted RBP	2.61	□□□□□ -1.99
SUB1	YMR039C	YJL118W	P47022	219 aa		2.61	□□□□□ -1.99
SUB1	YMR039C	CGR1	P53188	120 aa		2.61	□□□□□ -1.99
SUB1	YMR039C	MRPL50	P53724	139 aa		2.61	□□□□□ -1.99
SUB1	YMR039C	ALG11	P53954	548 aa	Known RBP	2.61	□□□□□ -1.99
SUB1	YMR039C	YMR209C	Q03648	457 aa		2.61	□□□□□ -1.99
SUB1	YMR039C	MRX9	Q07349	420 aa	Known RBP	2.61	□□□□□ -1.99
SUB1	YMR039C	RPN8	Q08723	338 aa	Known RBP	2.61	□□□□□ -1.99
SUB1	YMR039C	TIR4	Q12218	487 aa	Predicted RBP	2.61	□□□□□ -1.99
SUB1	YMR039C	RRP42	Q12277	265 aa	Predicted RBP	2.61	□□□□□ -1.99
SUB1	YMR039C	ATG31	Q12421	196 aa		2.61	□□□□□ -1.99
SUB1	YMR039C	YPR064W	Q12492	139 aa		2.61	□□□□□ -1.99
SUB1	YMR039C	ADF1	Q2V2Q1	113 aa		2.61	□□□□□ -1.99
SUB1	YMR039C	CWP1	P28319	239 aa		2.6	□□□□□ -1.99
SUB1	YMR039C	KRE6	P32486	720 aa		2.6	□□□□□ -1.99
SUB1	YMR039C	CYM1	P32898	989 aa		2.6	□□□□□ -1.99
SUB1	YMR039C	CSE1	P33307	960 aa		2.6	□□□□□ -1.99
SUB1	YMR039C	YKL071W	P36086	256 aa		2.6	□□□□□ -1.99
SUB1	YMR039C	SOP4	P39543	234 aa	Predicted RBP	2.6	□□□□□ -1.99
SUB1	YMR039C	MSS2	P40990	351 aa		2.6	□□□□□ -1.99
SUB1	YMR039C	GDS1	P41913	522 aa		2.6	□□□□□ -1.99
SUB1	YMR039C	OTU1	P43558	301 aa		2.6	□□□□□ -1.99
SUB1	YMR039C	AIM23	P47015	356 aa		2.6	□□□□□ -1.99
SUB1	YMR039C	TAD2	P47058	250 aa		2.6	□□□□□ -1.99
SUB1	YMR039C	UBC13	P52490	153 aa		2.6	□□□□□ -1.99
SUB1	YMR039C	VEL1	P53058	206 aa		2.6	□□□□□ -1.99
SUB1	YMR039C	TIM21	P53220	239 aa		2.6	□□□□□ -1.99
SUB1	YMR039C	PGA2	P53903	129 aa		2.6	□□□□□ -1.99
SUB1	YMR039C	SUR7	P54003	302 aa		2.6	□□□□□ -1.99
SUB1	YMR039C	KRE28	Q04431	385 aa		2.6	□□□□□ -1.99
SUB1	YMR039C	GAS2	Q06135	555 aa		2.6	□□□□□ -1.99
SUB1	YMR039C	PAM18	Q07914	168 aa		2.6	□□□□□ -1.99
SUB1	YMR039C	SDO1	Q07953	250 aa	Known RBP	2.6	□□□□□ -1.99
SUB1	YMR039C	POM33	Q12164	279 aa		2.6	□□□□□ -1.99
SUB1	YMR039C	HIS1	P00498	297 aa	Known RBP	2.59	□□□□□ -1.99
SUB1	YMR039C	ERD1	P16151	362 aa		2.59	□□□□□ -1.99
SUB1	YMR039C	URA10	P30402	227 aa		2.59	□□□□□ -1.99
SUB1	YMR039C	DOA4	P32571	926 aa		2.59	□□□□□ -1.99
SUB1	YMR039C	FRT2	P39734	528 aa		2.59	□□□□□ -1.99
SUB1	YMR039C	HEM14	P40012	539 aa		2.59	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms