RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W NFT1P0CE68 1218 aa8.92□□□□□ -0.98
SHH4YLR164W STE12P13574 688 aa8.92□□□□□ -0.98
SHH4YLR164W MDH2P22133 377 aa8.92□□□□□ -0.98
SHH4YLR164W PUB1P32588 453 aaKnown RBP RIP-Chip data8.92□□□□□ -0.98not detected
SHH4YLR164W ZRT3P34240 503 aa8.92□□□□□ -0.98
SHH4YLR164W KAE1P36132 386 aa8.92□□□□□ -0.98
SHH4YLR164W YKR073CP36153 106 aa8.92□□□□□ -0.98
SHH4YLR164W SDP1P40479 209 aa8.92□□□□□ -0.98
SHH4YLR164W NIT2P47016 307 aa8.92□□□□□ -0.98
SHH4YLR164W YJR098CP47139 656 aa8.92□□□□□ -0.98
SHH4YLR164W CWC23P52868 283 aaPredicted RBP8.92□□□□□ -0.98
SHH4YLR164W RAI1P53063 387 aaKnown RBP8.92□□□□□ -0.98
SHH4YLR164W ASI3P53983 676 aa8.92□□□□□ -0.98
SHH4YLR164W SDC1Q03323 175 aa8.92□□□□□ -0.98
SHH4YLR164W GRX3Q03835 250 aa8.92□□□□□ -0.98
SHH4YLR164W IPK1Q06667 281 aa8.92□□□□□ -0.98
SHH4YLR164W NGL1Q08213 363 aaKnown RBP8.92□□□□□ -0.98
SHH4YLR164W DCP1Q12517 231 aaPredicted RBP8.92□□□□□ -0.98
SHH4YLR164W RPN13O13563 156 aa8.91□□□□□ -0.98
SHH4YLR164W SIR2P06700 562 aa8.91□□□□□ -0.98
SHH4YLR164W PEP4P07267 405 aaKnown RBP8.91□□□□□ -0.98
SHH4YLR164W SEC62P21825 274 aa8.91□□□□□ -0.98
SHH4YLR164W BOS1P25385 244 aa8.91□□□□□ -0.98
SHH4YLR164W PUT3P25502 979 aaPredicted RBP8.91□□□□□ -0.98
SHH4YLR164W FUN26P31381 517 aa8.91□□□□□ -0.98
SHH4YLR164W ATS1P31386 333 aa8.91□□□□□ -0.98
SHH4YLR164W NUD1P32336 851 aa8.91□□□□□ -0.98
SHH4YLR164W HIS7P33734 552 aaKnown RBP8.91□□□□□ -0.98
SHH4YLR164W SDS22P36047 338 aa8.91□□□□□ -0.98
SHH4YLR164W FMP23P38231 175 aa8.91□□□□□ -0.98
SHH4YLR164W APD1P38281 316 aa8.91□□□□□ -0.98
SHH4YLR164W VBA2P38358 474 aaKnown RBP8.91□□□□□ -0.98
SHH4YLR164W POP1P41812 875 aa8.91□□□□□ -0.98
SHH4YLR164W HOL1P53389 586 aa8.91□□□□□ -0.98
SHH4YLR164W NOG1Q02892 647 aaKnown RBP8.91□□□□□ -0.98
SHH4YLR164W MSS11Q03825 758 aa8.91□□□□□ -0.98
SHH4YLR164W AIM6Q07716 390 aa8.91□□□□□ -0.98
SHH4YLR164W PEX27Q08580 376 aa8.91□□□□□ -0.98
SHH4YLR164W YOR238WQ08634 303 aa8.91□□□□□ -0.98
SHH4YLR164W HNT3Q08702 217 aa8.91□□□□□ -0.98
SHH4YLR164W YOR378WQ08902 515 aa8.91□□□□□ -0.98
SHH4YLR164W RPS13P05756 151 aaKnown RBP8.9□□□□□ -0.98
SHH4YLR164W PRE7P23724 241 aaKnown RBP8.9□□□□□ -0.98
SHH4YLR164W MTC2P34246 357 aa8.9□□□□□ -0.98
SHH4YLR164W PAU24P38155 120 aa8.9□□□□□ -0.98
SHH4YLR164W YHK8P38776 514 aa8.9□□□□□ -0.98
SHH4YLR164W MLH1P38920 769 aa8.9□□□□□ -0.98
SHH4YLR164W GDS1P41913 522 aa8.9□□□□□ -0.98
SHH4YLR164W PMT6P42934 759 aa8.9□□□□□ -0.98
SHH4YLR164W PAU12P53343 120 aa8.9□□□□□ -0.98
SHH4YLR164W NUP116Q02630 1113 aa8.9□□□□□ -0.98
SHH4YLR164W YPL039WQ03080 316 aa8.9□□□□□ -0.98
SHH4YLR164W BNA7Q04066 261 aa8.9□□□□□ -0.98
SHH4YLR164W VBA4Q04602 768 aaKnown RBP8.9□□□□□ -0.98
SHH4YLR164W MRPL51Q06090 140 aaPredicted RBP8.9□□□□□ -0.98
SHH4YLR164W NMA1Q06178 401 aaKnown RBP8.9□□□□□ -0.98
SHH4YLR164W MED2Q12124 431 aa8.9□□□□□ -0.98
SHH4YLR164W MSH5Q12175 901 aa8.9□□□□□ -0.98
SHH4YLR164W TIR4Q12218 487 aaPredicted RBP8.9□□□□□ -0.98
SHH4YLR164W FRE6Q12473 712 aa8.9□□□□□ -0.98
SHH4YLR164W YLR099W-AQ3E798 87 aa8.9□□□□□ -0.98
SHH4YLR164W MTR10Q99189 972 aa8.9□□□□□ -0.98
SHH4YLR164W YFR010W-AP0C5N0 62 aa8.89□□□□□ -0.99
SHH4YLR164W EXG1P23776 448 aaKnown RBP8.89□□□□□ -0.99
SHH4YLR164W THI4P32318 326 aa8.89□□□□□ -0.99
SHH4YLR164W MCM10P32354 571 aa8.89□□□□□ -0.99
SHH4YLR164W PUP2P32379 260 aa8.89□□□□□ -0.99
SHH4YLR164W RSM22P36056 628 aa8.89□□□□□ -0.99
SHH4YLR164W AMN1P38285 549 aaPredicted RBP8.89□□□□□ -0.99
SHH4YLR164W MSY1P48527 492 aa8.89□□□□□ -0.99
SHH4YLR164W RCF1Q03713 159 aa8.89□□□□□ -0.99
SHH4YLR164W YDR102CQ03864 110 aa8.89□□□□□ -0.99
SHH4YLR164W MIM1Q08176 113 aa8.89□□□□□ -0.99
SHH4YLR164W SOG2Q08817 791 aa8.89□□□□□ -0.99
SHH4YLR164W GRE1Q08969 168 aa8.89□□□□□ -0.99
SHH4YLR164W YPR1Q12458 312 aa8.89□□□□□ -0.99
SHH4YLR164W TEL1P38110 2787 aa8.89□□□□□ -0.99
SHH4YLR164W STE18P18852 110 aa8.88□□□□□ -0.99
SHH4YLR164W PCL1P24867 279 aa8.88□□□□□ -0.99
SHH4YLR164W ADH7P25377 361 aa8.88□□□□□ -0.99
SHH4YLR164W MOH1P38191 138 aa8.88□□□□□ -0.99
SHH4YLR164W AIM3P38266 947 aaKnown RBP8.88□□□□□ -0.99
SHH4YLR164W PEX32P38292 413 aa8.88□□□□□ -0.99
SHH4YLR164W RPS26AP39938 119 aaKnown RBP8.88□□□□□ -0.99
SHH4YLR164W RPS26BP39939 119 aaKnown RBP8.88□□□□□ -0.99
SHH4YLR164W YEL057CP39983 233 aa8.88□□□□□ -0.99
SHH4YLR164W YGL260WP53056 76 aa8.88□□□□□ -0.99
SHH4YLR164W RMD9P53140 646 aaKnown RBP8.88□□□□□ -0.99
SHH4YLR164W MRH4P53166 561 aa8.88□□□□□ -0.99
SHH4YLR164W BSC5P53755 489 aa8.88□□□□□ -0.99
SHH4YLR164W PDR16P53860 351 aaKnown RBP8.88□□□□□ -0.99
SHH4YLR164W MRPL35Q06678 367 aa8.88□□□□□ -0.99
SHH4YLR164W SSK1Q07084 712 aa8.88□□□□□ -0.99
SHH4YLR164W YHR214C-EQ8TGK0 99 aa8.88□□□□□ -0.99
SHH4YLR164W CDC9P04819 755 aa8.87□□□□□ -0.99
SHH4YLR164W STE50P25344 346 aa8.87□□□□□ -0.99
SHH4YLR164W MIT1P40002 666 aa8.87□□□□□ -0.99
SHH4YLR164W YJR120WP47157 116 aa8.87□□□□□ -0.99
SHH4YLR164W LYS20P48570 428 aaKnown RBP8.87□□□□□ -0.99
SHH4YLR164W PET191Q02772 108 aa8.87□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms