RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C EFM1P38732 585 aa1.22□□□□□ -2.21
RPL40BYKR094C HEM14P40012 539 aa1.22□□□□□ -2.21
RPL40BYKR094C AGP3P43548 558 aa1.22□□□□□ -2.21
RPL40BYKR094C PMT4P46971 762 aa1.22□□□□□ -2.21
RPL40BYKR094C LIA1P47120 325 aaKnown RBP1.22□□□□□ -2.21
RPL40BYKR094C YGR015CP53208 328 aa1.22□□□□□ -2.21
RPL40BYKR094C CPD1P53314 239 aa1.22□□□□□ -2.21
RPL40BYKR094C VAC7P53950 1165 aa1.22□□□□□ -2.21
RPL40BYKR094C SUR7P54003 302 aa1.22□□□□□ -2.21
RPL40BYKR094C MRX11Q03079 207 aa1.22□□□□□ -2.21
RPL40BYKR094C KAP95Q06142 861 aaKnown RBP1.22□□□□□ -2.21
RPL40BYKR094C YLR012CQ07927 99 aa1.22□□□□□ -2.21
RPL40BYKR094C RPN8Q08723 338 aaKnown RBP1.22□□□□□ -2.21
RPL40BYKR094C MMT2Q08970 484 aa1.22□□□□□ -2.21
RPL40BYKR094C TAF10Q12030 206 aa1.22□□□□□ -2.21
RPL40BYKR094C VIK1Q12045 647 aa1.22□□□□□ -2.21
RPL40BYKR094C YOL107WQ12239 342 aa1.22□□□□□ -2.21
RPL40BYKR094C MED4Q12343 284 aa1.22□□□□□ -2.21
RPL40BYKR094C RPN6Q12377 434 aa1.22□□□□□ -2.21
RPL40BYKR094C PRP46Q12417 451 aaPredicted RBP1.22□□□□□ -2.21
RPL40BYKR094C PRM4Q12498 284 aa1.22□□□□□ -2.21
RPL40BYKR094C TDH1P00360 332 aaKnown RBP1.21□□□□□ -2.22
RPL40BYKR094C RSR1P13856 272 aa1.21□□□□□ -2.22
RPL40BYKR094C SPS19P32573 292 aaKnown RBP1.21□□□□□ -2.22
RPL40BYKR094C PDC2P32896 925 aa1.21□□□□□ -2.22
RPL40BYKR094C MRPL6P32904 214 aa1.21□□□□□ -2.22
RPL40BYKR094C CBF5P33322 483 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22not detected
RPL40BYKR094C RPC37P36121 282 aa1.21□□□□□ -2.22
RPL40BYKR094C SHE3P38272 425 aaKnown RBP1.21□□□□□ -2.22
RPL40BYKR094C GGC1P38988 300 aa1.21□□□□□ -2.22
RPL40BYKR094C SOP4P39543 234 aaPredicted RBP1.21□□□□□ -2.22
RPL40BYKR094C YIR035CP40579 254 aa1.21□□□□□ -2.22
RPL40BYKR094C YJL144WP47009 104 aa1.21□□□□□ -2.22
RPL40BYKR094C TAD2P47058 250 aa1.21□□□□□ -2.22
RPL40BYKR094C YJR054WP47114 497 aa1.21□□□□□ -2.22
RPL40BYKR094C KAP114P53067 1004 aa1.21□□□□□ -2.22
RPL40BYKR094C COG7P53195 279 aa1.21□□□□□ -2.22
RPL40BYKR094C VHT1P53241 593 aa1.21□□□□□ -2.22
RPL40BYKR094C BIO4P53630 237 aa1.21□□□□□ -2.22
RPL40BYKR094C HST4P53688 370 aa1.21□□□□□ -2.22
RPL40BYKR094C YMR209CQ03648 457 aa1.21□□□□□ -2.22
RPL40BYKR094C GMC1Q04399 608 aa1.21□□□□□ -2.22
RPL40BYKR094C ADH6Q04894 360 aaKnown RBP1.21□□□□□ -2.22
RPL40BYKR094C GMC2Q06201 188 aa1.21□□□□□ -2.22
RPL40BYKR094C YLL007CQ07799 665 aa1.21□□□□□ -2.22
RPL40BYKR094C RRT8Q08219 342 aa1.21□□□□□ -2.22
RPL40BYKR094C SLM3Q12093 417 aa1.21□□□□□ -2.22
RPL40BYKR094C PER33Q12144 273 aa1.21□□□□□ -2.22
RPL40BYKR094C LAG2Q92325 660 aa1.21□□□□□ -2.22
RPL40BYKR094C TDH3P00359 332 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
RPL40BYKR094C HIS1P00498 297 aaKnown RBP1.2□□□□□ -2.22
RPL40BYKR094C ATP6P00854 259 aa1.2□□□□□ -2.22
RPL40BYKR094C TFS1P14306 219 aa1.2□□□□□ -2.22
RPL40BYKR094C HPR1P17629 752 aaKnown RBP1.2□□□□□ -2.22
RPL40BYKR094C MET16P18408 261 aaPredicted RBP1.2□□□□□ -2.22
RPL40BYKR094C DAL82P21705 255 aa1.2□□□□□ -2.22
RPL40BYKR094C ZIP1P31111 875 aa1.2□□□□□ -2.22
RPL40BYKR094C GCG1P32656 232 aaKnown RBP1.2□□□□□ -2.22
RPL40BYKR094C AST1P35183 429 aa1.2□□□□□ -2.22
RPL40BYKR094C TPO5P36029 618 aa1.2□□□□□ -2.22
RPL40BYKR094C MCH2P36032 473 aa1.2□□□□□ -2.22
RPL40BYKR094C SHE1P38200 338 aa1.2□□□□□ -2.22
RPL40BYKR094C TAE1P38340 232 aa1.2□□□□□ -2.22
RPL40BYKR094C TCD1P38756 429 aa1.2□□□□□ -2.22
RPL40BYKR094C YIL054WP40524 105 aa1.2□□□□□ -2.22
RPL40BYKR094C BNA6P43619 295 aa1.2□□□□□ -2.22
RPL40BYKR094C COQ5P49017 307 aa1.2□□□□□ -2.22
RPL40BYKR094C NUP84P52891 726 aa1.2□□□□□ -2.22
RPL40BYKR094C TIM21P53220 239 aa1.2□□□□□ -2.22
RPL40BYKR094C MRPL50P53724 139 aa1.2□□□□□ -2.22
RPL40BYKR094C YDR209CQ03480 137 aa1.2□□□□□ -2.22
RPL40BYKR094C UTP15Q04305 513 aaKnown RBP1.2□□□□□ -2.22
RPL40BYKR094C ARC18Q05933 178 aaKnown RBP1.2□□□□□ -2.22
RPL40BYKR094C FAR10Q06001 478 aa1.2□□□□□ -2.22
RPL40BYKR094C YLR173WQ06247 608 aa1.2□□□□□ -2.22
RPL40BYKR094C CTR3Q06686 241 aa1.2□□□□□ -2.22
RPL40BYKR094C MCT1Q12283 360 aa1.2□□□□□ -2.22
RPL40BYKR094C YPR096CO13587 100 aa1.19□□□□□ -2.22
RPL40BYKR094C RAD3P06839 778 aa1.19□□□□□ -2.22
RPL40BYKR094C FRS2P15625 503 aaKnown RBP1.19□□□□□ -2.22
RPL40BYKR094C IMP1P28627 190 aa1.19□□□□□ -2.22
RPL40BYKR094C SRB4P32569 687 aa1.19□□□□□ -2.22
RPL40BYKR094C CDC13P32797 924 aaKnown RBP1.19□□□□□ -2.22
RPL40BYKR094C SPT4P32914 102 aaPredicted RBP1.19□□□□□ -2.22
RPL40BYKR094C CSE1P33307 960 aa1.19□□□□□ -2.22
RPL40BYKR094C YKL187CP34231 750 aa1.19□□□□□ -2.22
RPL40BYKR094C COY1P34237 679 aa1.19□□□□□ -2.22
RPL40BYKR094C RFT1P38206 574 aaPredicted RBP1.19□□□□□ -2.22
RPL40BYKR094C YPC1P38298 316 aa1.19□□□□□ -2.22
RPL40BYKR094C SHC1P39000 512 aa1.19□□□□□ -2.22
RPL40BYKR094C KRE29P40026 464 aa1.19□□□□□ -2.22
RPL40BYKR094C RRT13P40042 185 aa1.19□□□□□ -2.22
RPL40BYKR094C SHQ1P40486 507 aaPredicted RBP1.19□□□□□ -2.22
RPL40BYKR094C FMP33P46998 180 aa1.19□□□□□ -2.22
RPL40BYKR094C YJL118WP47022 219 aa1.19□□□□□ -2.22
RPL40BYKR094C UBC13P52490 153 aa1.19□□□□□ -2.22
RPL40BYKR094C SDS23P53172 527 aa1.19□□□□□ -2.22
RPL40BYKR094C FMP48P53233 369 aa1.19□□□□□ -2.22
RPL40BYKR094C YNR066CP53752 436 aa1.19□□□□□ -2.22
RPL40BYKR094C ALG11P53954 548 aaKnown RBP1.19□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 55.5 ms