RNA–Protein interactions for RNA: YKL078W

DHR2, Transcript of Predominantly nucleolar DEAH-box ATP-dependent RNA helicase, yeast

Gene DHR2, Length 2,208 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DHR2	YKL078W	CCT4	P39078	528 aa	Known RBP	3.59	□□□□□ -1.83
DHR2	YKL078W	HAT2	P39984	401 aa		3.59	□□□□□ -1.83
DHR2	YKL078W	YAT2	P40017	923 aa		3.59	□□□□□ -1.83
DHR2	YKL078W	SPG5	P42933	373 aa		3.59	□□□□□ -1.83
DHR2	YKL078W	STE24	P47154	453 aa		3.59	□□□□□ -1.83
DHR2	YKL078W	JHD2	P47156	728 aa	Predicted RBP	3.59	□□□□□ -1.83
DHR2	YKL078W	BIO3	P50277	480 aa		3.59	□□□□□ -1.83
DHR2	YKL078W	NBP1	P52919	319 aa	Predicted RBP	3.59	□□□□□ -1.83
DHR2	YKL078W	CAF40	P53829	373 aa		3.59	□□□□□ -1.83
DHR2	YKL078W	VAC7	P53950	1165 aa		3.59	□□□□□ -1.83
DHR2	YKL078W	YDR248C	Q03786	193 aa		3.59	□□□□□ -1.83
DHR2	YKL078W	YMR027W	Q04371	470 aa		3.59	□□□□□ -1.83
DHR2	YKL078W	PAL1	Q05518	499 aa	Known RBP	3.59	□□□□□ -1.83
DHR2	YKL078W	FYV7	Q12247	151 aa		3.59	□□□□□ -1.83
DHR2	YKL078W	TPT1	Q12272	230 aa	Known RBP	3.59	□□□□□ -1.83
DHR2	YKL078W	DCN1	Q12395	269 aa		3.59	□□□□□ -1.83
DHR2	YKL078W	CSR2	Q12734	1121 aa		3.59	□□□□□ -1.83
DHR2	YKL078W	YBR298C-A	Q8TGK4	73 aa		3.59	□□□□□ -1.83
DHR2	YKL078W	FBA1	P14540	359 aa	Known RBP	3.59	□□□□□ -1.84
DHR2	YKL078W	RSA4	P25382	515 aa	Known RBP	3.59	□□□□□ -1.84
DHR2	YKL078W	MSK1	P32048	576 aa		3.59	□□□□□ -1.84
DHR2	YKL078W	GLC7	P32598	312 aa	Known RBP	3.59	□□□□□ -1.84
DHR2	YKL078W	VAM7	P32912	316 aa		3.59	□□□□□ -1.84
DHR2	YKL078W	SKT5	P34226	696 aa		3.59	□□□□□ -1.84
DHR2	YKL078W	YHR122W	P38829	231 aa		3.59	□□□□□ -1.84
DHR2	YKL078W	MNN9	P39107	395 aa	Known RBP	3.59	□□□□□ -1.84
DHR2	YKL078W	SEN34	P39707	275 aa		3.59	□□□□□ -1.84
DHR2	YKL078W	SHO1	P40073	367 aa		3.59	□□□□□ -1.84
DHR2	YKL078W	YIL152W	P40455	235 aa		3.59	□□□□□ -1.84
DHR2	YKL078W	GAB1	P41733	394 aa		3.59	□□□□□ -1.84
DHR2	YKL078W	IKS1	P47042	667 aa		3.59	□□□□□ -1.84
DHR2	YKL078W	NBP35	P52920	328 aa		3.59	□□□□□ -1.84
DHR2	YKL078W	POP6	P53218	158 aa		3.59	□□□□□ -1.84
DHR2	YKL078W	DIA1	P54005	336 aa		3.59	□□□□□ -1.84
DHR2	YKL078W	DID2	P69771	204 aa		3.59	□□□□□ -1.84
DHR2	YKL078W	TRM44	Q02648	567 aa	Known RBP	3.59	□□□□□ -1.84
DHR2	YKL078W	CWC27	Q02770	301 aa		3.59	□□□□□ -1.84
DHR2	YKL078W	YMR279C	Q03263	540 aa		3.59	□□□□□ -1.84
DHR2	YKL078W	YOR114W	Q12219	294 aa		3.59	□□□□□ -1.84
DHR2	YKL078W	PFK27	Q12471	397 aa	Predicted RBP	3.59	□□□□□ -1.84
DHR2	YKL078W	POM152	P39685	1337 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	ATP1	P07251	545 aa	Known RBP	3.58	□□□□□ -1.84
DHR2	YKL078W	RPS19A	P07280	144 aa	Known RBP	3.58	□□□□□ -1.84
DHR2	YKL078W	RPS19B	P07281	144 aa	Predicted RBP	3.58	□□□□□ -1.84
DHR2	YKL078W	COS2	P0CX12	379 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	COS3	P0CX13	379 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	MTF1	P14908	341 aa	Known RBP	3.58	□□□□□ -1.84
DHR2	YKL078W	HXT2	P23585	541 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	CIN8	P27895	1000 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	TFC1	P32367	649 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	YBP1	P38315	674 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	RCK2	P38623	610 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	YHR177W	P38867	453 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	NVJ1	P38881	321 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	VMA7	P39111	118 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	MST28	P39552	234 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	AIM24	P47127	394 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	VOA1	P53262	265 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	RSM27	P53305	110 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	ARK1	P53974	638 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	ARL3	Q02804	198 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	YMR181C	Q03231	154 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	CDC123	Q05791	360 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	YPR078C	Q06813	372 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	LDS2	Q08218	356 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	AKR2	Q12013	749 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	YDR262W	Q12331	272 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	RPL25	P04456	142 aa	Known RBP	3.58	□□□□□ -1.84
DHR2	YKL078W	SSA3	P09435	649 aa	Known RBP	3.58	□□□□□ -1.84
DHR2	YKL078W	ATR1	P13090	542 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	CNB1	P25296	175 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	SUA5	P32579	426 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
DHR2	YKL078W	YAR1	P46683	200 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	YJR030C	P47101	745 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	PHB2	P50085	310 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	PMT5	P52867	743 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	YGL114W	P53134	725 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	NSA1	P53136	463 aa	Predicted RBP	3.58	□□□□□ -1.84
DHR2	YKL078W	NUP116	Q02630	1113 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	YDR476C	Q03362	224 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	YLR297W	Q05899	129 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	ZEO1	Q08245	113 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	CSM4	Q08955	156 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	EMP46	Q12396	444 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	HKR1	P41809	1802 aa		3.58	□□□□□ -1.84
DHR2	YKL078W	FIG2	P25653	1609 aa		3.57	□□□□□ -1.84
DHR2	YKL078W	OPI3	P05375	206 aa		3.57	□□□□□ -1.84
DHR2	YKL078W	RPL4A	P10664	362 aa	Known RBP	3.57	□□□□□ -1.84
DHR2	YKL078W	MAS2	P11914	482 aa		3.57	□□□□□ -1.84
DHR2	YKL078W	GAL3	P13045	520 aa		3.57	□□□□□ -1.84
DHR2	YKL078W	NDC1	P32500	655 aa		3.57	□□□□□ -1.84
DHR2	YKL078W	ECM13	P38195	257 aa		3.57	□□□□□ -1.84
DHR2	YKL078W	YER085C	P40058	173 aa		3.57	□□□□□ -1.84
DHR2	YKL078W	LCP5	P40079	357 aa	Predicted RBP	3.57	□□□□□ -1.84
DHR2	YKL078W	FMP32	P43557	207 aa		3.57	□□□□□ -1.84
DHR2	YKL078W	YFR018C	P43599	363 aa		3.57	□□□□□ -1.84
DHR2	YKL078W	RPL4B	P49626	362 aa	Known RBP	3.57	□□□□□ -1.84
DHR2	YKL078W	SSU72	P53538	206 aa	Predicted RBP	3.57	□□□□□ -1.84
DHR2	YKL078W	CTF19	Q02732	369 aa		3.57	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms