RNA–Protein interactions for RNA: YKL012W

PRP40, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP40, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP40YKL012W GCN2P15442 1659 aa4.73□□□□□ -1.65
PRP40YKL012W SPS100P13130 326 aa4.73□□□□□ -1.65
PRP40YKL012W PDC2P32896 925 aa4.73□□□□□ -1.65
PRP40YKL012W RPC37P36121 282 aa4.73□□□□□ -1.65
PRP40YKL012W TAE1P38340 232 aa4.73□□□□□ -1.65
PRP40YKL012W HSM3P38348 480 aa4.73□□□□□ -1.65
PRP40YKL012W AIM10P39965 576 aaKnown RBP4.73□□□□□ -1.65
PRP40YKL012W SWC4P53201 476 aa4.73□□□□□ -1.65
PRP40YKL012W IMP4P53941 290 aaKnown RBP4.73□□□□□ -1.65
PRP40YKL012W SLT2Q00772 484 aa4.73□□□□□ -1.65
PRP40YKL012W BOP2Q06150 570 aa4.73□□□□□ -1.65
PRP40YKL012W RUD3Q12234 484 aaKnown RBP4.73□□□□□ -1.65
PRP40YKL012W CAT8P39113 1433 aa4.72□□□□□ -1.65
PRP40YKL012W RPL16BP26785 198 aaKnown RBP4.72□□□□□ -1.65
PRP40YKL012W CAB3P36076 571 aa4.72□□□□□ -1.65
PRP40YKL012W SOP4P39543 234 aaPredicted RBP4.72□□□□□ -1.65
PRP40YKL012W PEX22P39718 180 aa4.72□□□□□ -1.65
PRP40YKL012W OXA1P39952 402 aa4.72□□□□□ -1.65
PRP40YKL012W FAR10Q06001 478 aa4.72□□□□□ -1.65
PRP40YKL012W CTS2Q06350 511 aa4.72□□□□□ -1.65
PRP40YKL012W BTS1Q12051 335 aa4.72□□□□□ -1.65
PRP40YKL012W AAT2P23542 418 aaKnown RBP4.71□□□□□ -1.66
PRP40YKL012W URA10P30402 227 aa4.71□□□□□ -1.66
PRP40YKL012W BAT1P38891 393 aaKnown RBP4.71□□□□□ -1.66
PRP40YKL012W CHL4P38907 458 aa4.71□□□□□ -1.66
PRP40YKL012W GDS1P41913 522 aa4.71□□□□□ -1.66
PRP40YKL012W SRL4Q03085 281 aa4.71□□□□□ -1.66
PRP40YKL012W YET2Q04210 160 aa4.71□□□□□ -1.66
PRP40YKL012W DTD1Q07648 150 aaKnown RBP4.71□□□□□ -1.66
PRP40YKL012W BUD3P25558 1636 aa4.71□□□□□ -1.66
PRP40YKL012W PDR12Q02785 1511 aa4.71□□□□□ -1.66
PRP40YKL012W ADH2P00331 348 aaKnown RBP4.7□□□□□ -1.66
PRP40YKL012W ERD1P16151 362 aa4.7□□□□□ -1.66
PRP40YKL012W UBC13P52490 153 aa4.7□□□□□ -1.66
PRP40YKL012W SCS7Q03529 384 aa4.7□□□□□ -1.66
PRP40YKL012W YMR209CQ03648 457 aa4.7□□□□□ -1.66
PRP40YKL012W ARV1Q06541 321 aa4.7□□□□□ -1.66
PRP40YKL012W RSA1Q08932 381 aa4.7□□□□□ -1.66
PRP40YKL012W RBD2Q12270 262 aa4.7□□□□□ -1.66
PRP40YKL012W NUP159P40477 1460 aa4.7□□□□□ -1.66
PRP40YKL012W ILV1P00927 576 aaKnown RBP4.7□□□□□ -1.66
PRP40YKL012W PHO2P07269 559 aa4.7□□□□□ -1.66
PRP40YKL012W MRPL10P36520 322 aa4.7□□□□□ -1.66
PRP40YKL012W YPC1P38298 316 aa4.7□□□□□ -1.66
PRP40YKL012W YHR045WP38775 560 aa4.7□□□□□ -1.66
PRP40YKL012W YPI1P43587 155 aa4.7□□□□□ -1.66
PRP40YKL012W CDH1P53197 566 aa4.7□□□□□ -1.66
PRP40YKL012W TLG2Q08144 397 aa4.7□□□□□ -1.66
PRP40YKL012W POM33Q12164 279 aa4.7□□□□□ -1.66
PRP40YKL012W STE7P06784 515 aa4.69□□□□□ -1.66
PRP40YKL012W DEP1P31385 405 aa4.69□□□□□ -1.66
PRP40YKL012W MIG3P39943 394 aa4.69□□□□□ -1.66
PRP40YKL012W COA1P40452 197 aa4.69□□□□□ -1.66
PRP40YKL012W BNA6P43619 295 aa4.69□□□□□ -1.66
PRP40YKL012W YJR054WP47114 497 aa4.69□□□□□ -1.66
PRP40YKL012W TIS11P47977 285 aa4.69□□□□□ -1.66
PRP40YKL012W YLR177WQ06251 628 aa4.69□□□□□ -1.66
PRP40YKL012W RPN8Q08723 338 aaKnown RBP4.69□□□□□ -1.66
PRP40YKL012W SRB8P25648 1427 aa4.69□□□□□ -1.66
PRP40YKL012W CDC50P25656 391 aa4.68□□□□□ -1.66
PRP40YKL012W CWP1P28319 239 aa4.68□□□□□ -1.66
PRP40YKL012W YKL071WP36086 256 aa4.68□□□□□ -1.66
PRP40YKL012W RCK1P38622 512 aa4.68□□□□□ -1.66
PRP40YKL012W MEP2P41948 499 aa4.68□□□□□ -1.66
PRP40YKL012W PET117Q02771 107 aa4.68□□□□□ -1.66
PRP40YKL012W VBA1Q04301 562 aa4.68□□□□□ -1.66
PRP40YKL012W RRG7Q08774 242 aaPredicted RBP4.68□□□□□ -1.66
PRP40YKL012W RRP42Q12277 265 aaPredicted RBP4.68□□□□□ -1.66
PRP40YKL012W MET16P18408 261 aaPredicted RBP4.68□□□□□ -1.66
PRP40YKL012W INO2P26798 304 aa4.68□□□□□ -1.66
PRP40YKL012W UTP18P40362 594 aaPredicted RBP4.68□□□□□ -1.66
PRP40YKL012W YGR015CP53208 328 aa4.68□□□□□ -1.66
PRP40YKL012W VHT1P53241 593 aa4.68□□□□□ -1.66
PRP40YKL012W TPC1P53257 314 aa4.68□□□□□ -1.66
PRP40YKL012W ENT5Q03769 411 aaKnown RBP4.68□□□□□ -1.66
PRP40YKL012W BSC6Q08280 497 aa4.68□□□□□ -1.66
PRP40YKL012W YPR064WQ12492 139 aa4.68□□□□□ -1.66
PRP40YKL012W MHP1P43638 1398 aa4.67□□□□□ -1.66
PRP40YKL012W RAD3P06839 778 aa4.67□□□□□ -1.66
PRP40YKL012W RRT12P25381 491 aa4.67□□□□□ -1.66
PRP40YKL012W ARO4P32449 370 aaKnown RBP4.67□□□□□ -1.66
PRP40YKL012W PFS1P38872 237 aa4.67□□□□□ -1.66
PRP40YKL012W PET8P38921 284 aa4.67□□□□□ -1.66
PRP40YKL012W BFR1P38934 470 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
PRP40YKL012W TIM17P39515 158 aa4.67□□□□□ -1.66
PRP40YKL012W TIM21P53220 239 aa4.67□□□□□ -1.66
PRP40YKL012W CPD1P53314 239 aa4.67□□□□□ -1.66
PRP40YKL012W YLR446WQ06204 433 aa4.67□□□□□ -1.66
PRP40YKL012W PRB1P09232 635 aa4.66□□□□□ -1.66
PRP40YKL012W TFS1P14306 219 aa4.66□□□□□ -1.66
PRP40YKL012W VPS1P21576 704 aaKnown RBP4.66□□□□□ -1.66
PRP40YKL012W CBF5P33322 483 aaKnown RBP RIP-Chip data4.66□□□□□ -1.66not detected
PRP40YKL012W OM14P38325 134 aa4.66□□□□□ -1.66
PRP40YKL012W FMC1P40491 155 aa4.66□□□□□ -1.66
PRP40YKL012W YIA6P40556 373 aa4.66□□□□□ -1.66
PRP40YKL012W CWC21Q03375 135 aaKnown RBP4.66□□□□□ -1.66
PRP40YKL012W SGT2Q12118 346 aaKnown RBP4.66□□□□□ -1.66
PRP40YKL012W PDR5P33302 1511 aaKnown RBP4.66□□□□□ -1.66
PRP40YKL012W ZRC1P20107 442 aa4.65□□□□□ -1.66
PRP40YKL012W DAL82P21705 255 aa4.65□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms