RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A NOP13P53883 403 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
SFT1YKL006C-A SKI8Q02793 397 aaPredicted RBP2.43□□□□□ -2.02
SFT1YKL006C-A MRPS17Q03246 237 aaPredicted RBP2.43□□□□□ -2.02
SFT1YKL006C-A OST6Q03723 332 aa2.43□□□□□ -2.02
SFT1YKL006C-A GTO3Q04806 366 aa2.43□□□□□ -2.02
SFT1YKL006C-A PAM18Q07914 168 aa2.43□□□□□ -2.02
SFT1YKL006C-A YLR012CQ07927 99 aa2.43□□□□□ -2.02
SFT1YKL006C-A DDC1Q08949 612 aa2.43□□□□□ -2.02
SFT1YKL006C-A POM33Q12164 279 aa2.43□□□□□ -2.02
SFT1YKL006C-A MSH5Q12175 901 aa2.43□□□□□ -2.02
SFT1YKL006C-A RPN6Q12377 434 aa2.43□□□□□ -2.02
SFT1YKL006C-A REP1P03871 373 aa2.42□□□□□ -2.02
SFT1YKL006C-A RPL31AP0C2H8 113 aaKnown RBP2.42□□□□□ -2.02
SFT1YKL006C-A FUN26P31381 517 aa2.42□□□□□ -2.02
SFT1YKL006C-A DEP1P31385 405 aa2.42□□□□□ -2.02
SFT1YKL006C-A ASF2P32448 525 aaPredicted RBP2.42□□□□□ -2.02
SFT1YKL006C-A MEI5P32489 222 aa2.42□□□□□ -2.02
SFT1YKL006C-A RCK2P38623 610 aa2.42□□□□□ -2.02
SFT1YKL006C-A YFL012WP43580 148 aa2.42□□□□□ -2.02
SFT1YKL006C-A CIN2P46670 268 aa2.42□□□□□ -2.02
SFT1YKL006C-A PGU1P47180 361 aa2.42□□□□□ -2.02
SFT1YKL006C-A GIM3P53900 129 aa2.42□□□□□ -2.02
SFT1YKL006C-A ENT5Q03769 411 aaKnown RBP2.42□□□□□ -2.02
SFT1YKL006C-A VBA1Q04301 562 aa2.42□□□□□ -2.02
SFT1YKL006C-A ASR1Q06834 288 aa2.42□□□□□ -2.02
SFT1YKL006C-A RDL2Q08742 149 aaKnown RBP2.42□□□□□ -2.02
SFT1YKL006C-A YDL109CQ12103 647 aa2.42□□□□□ -2.02
SFT1YKL006C-A FRE8Q12209 686 aa2.42□□□□□ -2.02
SFT1YKL006C-A RHO1P06780 209 aaKnown RBP2.41□□□□□ -2.02
SFT1YKL006C-A SPS100P13130 326 aa2.41□□□□□ -2.02
SFT1YKL006C-A RPO26P20435 155 aa2.41□□□□□ -2.02
SFT1YKL006C-A DAL82P21705 255 aa2.41□□□□□ -2.02
SFT1YKL006C-A RAD51P25454 400 aa2.41□□□□□ -2.02
SFT1YKL006C-A RPL16AP26784 199 aaKnown RBP2.41□□□□□ -2.02
SFT1YKL006C-A SRB4P32569 687 aa2.41□□□□□ -2.02
SFT1YKL006C-A PDC2P32896 925 aa2.41□□□□□ -2.02
SFT1YKL006C-A MRPL6P32904 214 aa2.41□□□□□ -2.02
SFT1YKL006C-A AIM29P36154 155 aa2.41□□□□□ -2.02
SFT1YKL006C-A YPC1P38298 316 aa2.41□□□□□ -2.02
SFT1YKL006C-A YER184CP39961 794 aa2.41□□□□□ -2.02
SFT1YKL006C-A YIA6P40556 373 aa2.41□□□□□ -2.02
SFT1YKL006C-A YNL320WP42840 284 aa2.41□□□□□ -2.02
SFT1YKL006C-A UBC13P52490 153 aa2.41□□□□□ -2.02
SFT1YKL006C-A ALG11P53954 548 aaKnown RBP2.41□□□□□ -2.02
SFT1YKL006C-A CDC14Q00684 551 aa2.41□□□□□ -2.02
SFT1YKL006C-A YPL077CQ02831 240 aa2.41□□□□□ -2.02
SFT1YKL006C-A TRM82Q03774 444 aa2.41□□□□□ -2.02
SFT1YKL006C-A SNX41Q04053 625 aa2.41□□□□□ -2.02
SFT1YKL006C-A YOS9Q99220 542 aa2.41□□□□□ -2.02
SFT1YKL006C-A IZH4Q99393 312 aa2.41□□□□□ -2.02
SFT1YKL006C-A ILV1P00927 576 aaKnown RBP2.4□□□□□ -2.03
SFT1YKL006C-A RPL23AP0CX41 137 aaKnown RBP2.4□□□□□ -2.03
SFT1YKL006C-A RPL23BP0CX42 137 aaKnown RBP2.4□□□□□ -2.03
SFT1YKL006C-A MRP1P10662 321 aaKnown RBP2.4□□□□□ -2.03
SFT1YKL006C-A RPL16BP26785 198 aaKnown RBP2.4□□□□□ -2.03
SFT1YKL006C-A FMT1P32785 401 aa2.4□□□□□ -2.03
SFT1YKL006C-A MGM101P32787 269 aaKnown RBP2.4□□□□□ -2.03
SFT1YKL006C-A YKL063CP35725 167 aa2.4□□□□□ -2.03
SFT1YKL006C-A MCH2P36032 473 aa2.4□□□□□ -2.03
SFT1YKL006C-A NPT1P39683 429 aaKnown RBP2.4□□□□□ -2.03
SFT1YKL006C-A HEM14P40012 539 aa2.4□□□□□ -2.03
SFT1YKL006C-A DDI1P40087 428 aa2.4□□□□□ -2.03
SFT1YKL006C-A HIT1P46973 164 aa2.4□□□□□ -2.03
SFT1YKL006C-A NBP1P52919 319 aaPredicted RBP2.4□□□□□ -2.03
SFT1YKL006C-A CDH1P53197 566 aa2.4□□□□□ -2.03
SFT1YKL006C-A SWC4P53201 476 aa2.4□□□□□ -2.03
SFT1YKL006C-A CPD1P53314 239 aa2.4□□□□□ -2.03
SFT1YKL006C-A HCH1P53834 153 aa2.4□□□□□ -2.03
SFT1YKL006C-A SUR7P54003 302 aa2.4□□□□□ -2.03
SFT1YKL006C-A DIB1Q06819 143 aaPredicted RBP2.4□□□□□ -2.03
SFT1YKL006C-A YDL114WQ07530 308 aa2.4□□□□□ -2.03
SFT1YKL006C-A CLP1Q08685 445 aaPredicted RBP2.4□□□□□ -2.03
SFT1YKL006C-A YDL199CQ12407 687 aa2.4□□□□□ -2.03
SFT1YKL006C-A HIS1P00498 297 aaKnown RBP2.39□□□□□ -2.03
SFT1YKL006C-A HEM4P06174 275 aa2.39□□□□□ -2.03
SFT1YKL006C-A RPS14AP06367 137 aaKnown RBP2.39□□□□□ -2.03
SFT1YKL006C-A TCP1P12612 559 aaKnown RBP2.39□□□□□ -2.03
SFT1YKL006C-A DAL81P21657 970 aa2.39□□□□□ -2.03
SFT1YKL006C-A MIR1P23641 311 aaKnown RBP2.39□□□□□ -2.03
SFT1YKL006C-A POF1P25576 258 aa2.39□□□□□ -2.03
SFT1YKL006C-A PBN1P25580 416 aa2.39□□□□□ -2.03
SFT1YKL006C-A PMT2P31382 759 aa2.39□□□□□ -2.03
SFT1YKL006C-A MAL32P38158 584 aa2.39□□□□□ -2.03
SFT1YKL006C-A PRS2P38620 318 aaKnown RBP2.39□□□□□ -2.03
SFT1YKL006C-A WSC4P38739 605 aa2.39□□□□□ -2.03
SFT1YKL006C-A TDA11P38854 504 aa2.39□□□□□ -2.03
SFT1YKL006C-A RPS14BP39516 138 aaKnown RBP2.39□□□□□ -2.03
SFT1YKL006C-A SOP4P39543 234 aaPredicted RBP2.39□□□□□ -2.03
SFT1YKL006C-A YER034WP40022 185 aaKnown RBP2.39□□□□□ -2.03
SFT1YKL006C-A VHT1P53241 593 aa2.39□□□□□ -2.03
SFT1YKL006C-A MAL12P53341 584 aa2.39□□□□□ -2.03
SFT1YKL006C-A MRPL50P53724 139 aa2.39□□□□□ -2.03
SFT1YKL006C-A YNL040WP53960 456 aaPredicted RBP2.39□□□□□ -2.03
SFT1YKL006C-A REX2P54964 269 aaKnown RBP2.39□□□□□ -2.03
SFT1YKL006C-A SLT2Q00772 484 aa2.39□□□□□ -2.03
SFT1YKL006C-A BNA7Q04066 261 aa2.39□□□□□ -2.03
SFT1YKL006C-A YHC1Q05900 231 aaKnown RBP2.39□□□□□ -2.03
SFT1YKL006C-A TAF10Q12030 206 aa2.39□□□□□ -2.03
SFT1YKL006C-A UTP23Q12339 254 aaKnown RBP2.39□□□□□ -2.03
SFT1YKL006C-A PRM7Q12459 698 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms