RNA–Protein interactions for RNA: YJL189W

RPL39, Transcript of Ribosomal 60S subunit protein L39, yeast

Gene RPL39, Length 156 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL39	YJL189W	YOR268C	Q08734	132 aa		0.31	□□□□□ -2.36
RPL39	YJL189W	VPH2	P32341	215 aa		0.3	□□□□□ -2.36
RPL39	YJL189W	MEI5	P32489	222 aa		0.3	□□□□□ -2.36
RPL39	YJL189W	YHR045W	P38775	560 aa		0.3	□□□□□ -2.36
RPL39	YJL189W	OST3	P48439	350 aa		0.3	□□□□□ -2.36
RPL39	YJL189W	MND1	P53102	219 aa		0.3	□□□□□ -2.36
RPL39	YJL189W	MLC1	P53141	149 aa		0.3	□□□□□ -2.36
RPL39	YJL189W	YNR068C	P53754	272 aa		0.3	□□□□□ -2.36
RPL39	YJL189W	SPC19	Q03954	165 aa		0.3	□□□□□ -2.36
RPL39	YJL189W	YMR310C	Q04867	317 aa	Predicted RBP	0.3	□□□□□ -2.36
RPL39	YJL189W	ATG5	Q12380	294 aa		0.3	□□□□□ -2.36
RPL39	YJL189W	GAL7	P08431	366 aa		0.29	□□□□□ -2.36
RPL39	YJL189W	THR4	P16120	514 aa	Known RBP	0.29	□□□□□ -2.36
RPL39	YJL189W	IMP1	P28627	190 aa		0.29	□□□□□ -2.36
RPL39	YJL189W	SPL2	P38839	148 aa		0.29	□□□□□ -2.36
RPL39	YJL189W	YDR089W	P38966	869 aa		0.29	□□□□□ -2.36
RPL39	YJL189W	YIL089W	P40500	205 aa		0.29	□□□□□ -2.36
RPL39	YJL189W	YFL064C	P43540	174 aa		0.29	□□□□□ -2.36
RPL39	YJL189W	PRP24	P49960	444 aa	Known RBP	0.29	□□□□□ -2.36
RPL39	YJL189W	PXR1	P53335	271 aa	Predicted RBP	0.29	□□□□□ -2.36
RPL39	YJL189W	UTP6	Q02354	440 aa	Known RBP	0.29	□□□□□ -2.36
RPL39	YJL189W	YOL019W	Q08157	551 aa		0.29	□□□□□ -2.36
RPL39	YJL189W	HMX1	P32339	317 aa		0.28	□□□□□ -2.36
RPL39	YJL189W	CDC13	P32797	924 aa	Known RBP	0.28	□□□□□ -2.36
RPL39	YJL189W	AYR1	P40471	297 aa		0.28	□□□□□ -2.36
RPL39	YJL189W	YJL055W	P47044	245 aa		0.28	□□□□□ -2.36
RPL39	YJL189W	MNE1	P24720	663 aa		0.27	□□□□□ -2.37
RPL39	YJL189W	FAA1	P30624	700 aa	Known RBP	0.27	□□□□□ -2.37
RPL39	YJL189W	DOA4	P32571	926 aa		0.27	□□□□□ -2.37
RPL39	YJL189W	YHR122W	P38829	231 aa		0.27	□□□□□ -2.37
RPL39	YJL189W	SUR2	P38992	349 aa		0.27	□□□□□ -2.37
RPL39	YJL189W	SWT21	P53873	357 aa	Predicted RBP	0.27	□□□□□ -2.37
RPL39	YJL189W	TVP15	Q03860	143 aa		0.27	□□□□□ -2.37
RPL39	YJL189W	YLR012C	Q07927	99 aa		0.27	□□□□□ -2.37
RPL39	YJL189W	PAR32	Q12515	295 aa	Known RBP	0.27	□□□□□ -2.37
RPL39	YJL189W	YLL053C	P0CD98	152 aa		0.26	□□□□□ -2.37
RPL39	YJL189W	UBA1	P22515	1024 aa	Known RBP	0.26	□□□□□ -2.37
RPL39	YJL189W	HXT2	P23585	541 aa		0.26	□□□□□ -2.37
RPL39	YJL189W	MDL1	P33310	695 aa		0.26	□□□□□ -2.37
RPL39	YJL189W	SOP4	P39543	234 aa	Predicted RBP	0.26	□□□□□ -2.37
RPL39	YJL189W	AVT6	P40074	448 aa		0.26	□□□□□ -2.37
RPL39	YJL189W	UTP25	P40498	721 aa	Known RBP	0.26	□□□□□ -2.37
RPL39	YJL189W	MRPL49	P40858	161 aa	Predicted RBP	0.26	□□□□□ -2.37
RPL39	YJL189W	LIF1	P53150	421 aa		0.26	□□□□□ -2.37
RPL39	YJL189W	YNL143C	P53908	130 aa		0.26	□□□□□ -2.37
RPL39	YJL189W	MRS2	Q01926	470 aa		0.26	□□□□□ -2.37
RPL39	YJL189W	NUP49	Q02199	472 aa		0.26	□□□□□ -2.37
RPL39	YJL189W	BOL1	Q3E793	110 aa		0.26	□□□□□ -2.37
RPL39	YJL189W	LAG2	Q92325	660 aa		0.26	□□□□□ -2.37
RPL39	YJL189W	PXA2	P34230	853 aa		0.25	□□□□□ -2.37
RPL39	YJL189W	MRPL3	P36516	390 aa		0.25	□□□□□ -2.37
RPL39	YJL189W	PES4	P39684	611 aa		0.25	□□□□□ -2.37
RPL39	YJL189W	COG3	P40094	801 aa		0.25	□□□□□ -2.37
RPL39	YJL189W	YMR134W	P40207	237 aa		0.25	□□□□□ -2.37
RPL39	YJL189W	RSC1	P53236	928 aa		0.25	□□□□□ -2.37
RPL39	YJL189W	NUP157	P40064	1391 aa	Known RBP	0.24	□□□□□ -2.37
RPL39	YJL189W	YOL162W	P0CF19	215 aa		0.24	□□□□□ -2.37
RPL39	YJL189W	ATG15	P25641	520 aa		0.24	□□□□□ -2.37
RPL39	YJL189W	YSW1	P38280	609 aa		0.24	□□□□□ -2.37
RPL39	YJL189W	DSE2	P38844	325 aa		0.24	□□□□□ -2.37
RPL39	YJL189W	BTT1	P40314	149 aa	Predicted RBP	0.24	□□□□□ -2.37
RPL39	YJL189W	RPL10	P41805	221 aa	Known RBP	0.24	□□□□□ -2.37
RPL39	YJL189W	GON7	P46984	123 aa		0.24	□□□□□ -2.37
RPL39	YJL189W	TAF6	P53040	516 aa		0.24	□□□□□ -2.37
RPL39	YJL189W	YDL144C	Q07589	356 aa		0.24	□□□□□ -2.37
RPL39	YJL189W	SPO24	Q3E752	67 aa		0.24	□□□□□ -2.37
RPL39	YJL189W	CDC7	P06243	507 aa		0.23	□□□□□ -2.37
RPL39	YJL189W	TOM40	P23644	387 aa	Known RBP	0.23	□□□□□ -2.37
RPL39	YJL189W	RBK1	P25332	333 aa		0.23	□□□□□ -2.37
RPL39	YJL189W	ALP1	P38971	573 aa		0.23	□□□□□ -2.37
RPL39	YJL189W	YJL016W	P47072	561 aa		0.23	□□□□□ -2.37
RPL39	YJL189W	YPL039W	Q03080	316 aa		0.23	□□□□□ -2.37
RPL39	YJL189W	TFB5	Q3E7C1	72 aa	Predicted RBP	0.23	□□□□□ -2.37
RPL39	YJL189W	UBR2	Q07963	1872 aa		0.22	□□□□□ -2.37
RPL39	YJL189W	HSP82	P02829	709 aa	Known RBP	0.22	□□□□□ -2.37
RPL39	YJL189W	KRE6	P32486	720 aa		0.22	□□□□□ -2.37
RPL39	YJL189W	VMA8	P32610	256 aa	Known RBP	0.22	□□□□□ -2.37
RPL39	YJL189W	TPO5	P36029	618 aa		0.22	□□□□□ -2.37
RPL39	YJL189W	YKR045C	P36138	183 aa		0.22	□□□□□ -2.37
RPL39	YJL189W	YPC1	P38298	316 aa		0.22	□□□□□ -2.37
RPL39	YJL189W	KRE29	P40026	464 aa		0.22	□□□□□ -2.37
RPL39	YJL189W	AVT7	P40501	490 aa		0.22	□□□□□ -2.37
RPL39	YJL189W	SNX41	Q04053	625 aa		0.22	□□□□□ -2.37
RPL39	YJL189W	YLR446W	Q06204	433 aa		0.22	□□□□□ -2.37
RPL39	YJL189W	YLL007C	Q07799	665 aa		0.22	□□□□□ -2.37
RPL39	YJL189W	YBL112C	Q3E7Y4	105 aa		0.22	□□□□□ -2.37
RPL39	YJL189W	RGS2	Q99188	309 aa		0.22	□□□□□ -2.37
RPL39	YJL189W	RAS2	P01120	322 aa	Known RBP	0.21	□□□□□ -2.38
RPL39	YJL189W	RPL6B	P05739	176 aa	Known RBP	0.21	□□□□□ -2.38
RPL39	YJL189W	STE3	P06783	470 aa		0.21	□□□□□ -2.38
RPL39	YJL189W	SGA1	P08019	549 aa		0.21	□□□□□ -2.38
RPL39	YJL189W	RDS1	P25611	832 aa		0.21	□□□□□ -2.38
RPL39	YJL189W	YHL026C	P38740	315 aa		0.21	□□□□□ -2.38
RPL39	YJL189W	PRP39	P39682	629 aa	Known RBP	0.21	□□□□□ -2.38
RPL39	YJL189W	GLE2	P40066	365 aa		0.21	□□□□□ -2.38
RPL39	YJL189W	YFL040W	P43562	540 aa		0.21	□□□□□ -2.38
RPL39	YJL189W	RPL6A	Q02326	176 aa	Known RBP	0.21	□□□□□ -2.38
RPL39	YJL189W	STE23	Q06010	1027 aa		0.21	□□□□□ -2.38
RPL39	YJL189W	RPL16B	P26785	198 aa	Known RBP	0.2	□□□□□ -2.38
RPL39	YJL189W	GCG1	P32656	232 aa	Known RBP	0.2	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms