RNA–Protein interactions for RNA: YJL104W

PAM16, Transcript of Subunit of the import motor (PAM complex), yeast

Gene PAM16, Length 450 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM16	YJL104W	YKL075C	P36083	450 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	SWC5	P38326	303 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	YHL037C	P38733	133 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	TRR2	P38816	342 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	AIM18	P38884	321 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	CIN4	P39110	191 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	NPT1	P39683	429 aa	Known RBP	0.83	□□□□□ -2.28
PAM16	YJL104W	YER010C	P40011	234 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	AGE2	P40529	298 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	APQ12	P40532	138 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	YFL064C	P43540	174 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	FAR3	P46671	204 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	ALB1	P47019	175 aa	Predicted RBP	0.83	□□□□□ -2.28
PAM16	YJL104W	YJR149W	P47177	404 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	SSN8	P47821	323 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	RPS12	P48589	143 aa	Known RBP	0.83	□□□□□ -2.28
PAM16	YJL104W	UBC13	P52490	153 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	YPL077C	Q02831	240 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	MRP51	Q02950	344 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	ODC1	Q03028	310 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	YPL039W	Q03080	316 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	NGL3	Q03210	505 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	MMT1	Q03218	510 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	RVB1	Q03940	463 aa	Known RBP	0.83	□□□□□ -2.28
PAM16	YJL104W	ERV41	Q04651	352 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	ERB1	Q04660	807 aa	Known RBP	0.83	□□□□□ -2.28
PAM16	YJL104W	BCH1	Q05029	724 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	YPR078C	Q06813	372 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	PRP11	Q07350	266 aa	Predicted RBP	0.83	□□□□□ -2.28
PAM16	YJL104W	RRP40	Q08285	240 aa	Known RBP	0.83	□□□□□ -2.28
PAM16	YJL104W	FMP40	Q08968	688 aa	Predicted RBP	0.83	□□□□□ -2.28
PAM16	YJL104W	YPR202W	Q08993	238 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	RTC5	Q12108	567 aa	Known RBP	0.83	□□□□□ -2.28
PAM16	YJL104W	MED2	Q12124	431 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	USB1	Q12208	290 aa	Known RBP	0.83	□□□□□ -2.28
PAM16	YJL104W	YPR011C	Q12251	326 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	RRP42	Q12277	265 aa	Predicted RBP	0.83	□□□□□ -2.28
PAM16	YJL104W	OCA6	Q12454	224 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	IZH4	Q99393	312 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	QCR6	P00127	147 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	SCEI	P03882	235 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	CDC37	P06101	506 aa	Known RBP	0.82	□□□□□ -2.28
PAM16	YJL104W	STE7	P06784	515 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	RAD10	P06838	210 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	SEC53	P07283	254 aa	Known RBP	0.82	□□□□□ -2.28
PAM16	YJL104W	YAR066W	P0CX18	203 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	YHR214W	P0CX19	203 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	RPL19A	P0CX82	189 aa	Known RBP	0.82	□□□□□ -2.28
PAM16	YJL104W	RPL19B	P0CX83	189 aa	Predicted RBP	0.82	□□□□□ -2.28
PAM16	YJL104W	ARF1	P11076	181 aa	Known RBP	0.82	□□□□□ -2.28
PAM16	YJL104W	RPL3	P14126	387 aa	Known RBP	0.82	□□□□□ -2.28
PAM16	YJL104W	ARO3	P14843	370 aa	Known RBP	0.82	□□□□□ -2.28
PAM16	YJL104W	NSP1	P14907	823 aa	Known RBP	0.82	□□□□□ -2.28
PAM16	YJL104W	RPB4	P20433	221 aa	Predicted RBP	0.82	□□□□□ -2.28
PAM16	YJL104W	DAL80	P26343	269 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	URA7	P28274	579 aa	Known RBP	0.82	□□□□□ -2.28
PAM16	YJL104W	BMH1	P29311	267 aa	Known RBP	0.82	□□□□□ -2.28
PAM16	YJL104W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.82	□□□□□ -2.28	not detected
PAM16	YJL104W	ECM25	P32525	599 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	IES6	P32617	166 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	REC114	P32841	428 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	YME2	P32843	850 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	RIB5	P38145	238 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	0.82	□□□□□ -2.28	not detected
PAM16	YJL104W	ECM8	P38246	354 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	FES1	P38260	290 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	UTP9	P38882	575 aa	Known RBP	0.82	□□□□□ -2.28
PAM16	YJL104W	MIG3	P39943	394 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	MEP1	P40260	492 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	RFC4	P40339	323 aa	Known RBP	0.82	□□□□□ -2.28
PAM16	YJL104W	ALG5	P40350	334 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	UTP25	P40498	721 aa	Known RBP	0.82	□□□□□ -2.28
PAM16	YJL104W	YIL029C	P40538	142 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	YFL051C	P43552	160 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	PHO86	P46956	311 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	YJR012C	P47087	207 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	PGU1	P47180	361 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	CCC1	P47818	322 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	APT1	P49435	187 aa	Known RBP	0.82	□□□□□ -2.28
PAM16	YJL104W	SIP18	P50263	79 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	MDM34	P53083	459 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	ROG1	P53118	685 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	YGR015C	P53208	328 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	YGR111W	P53265	400 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	SYF2	P53277	215 aa	Predicted RBP	0.82	□□□□□ -2.28
PAM16	YJL104W	RSM27	P53305	110 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	MTM1	P53320	366 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	YNR064C	P53750	290 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	YNL140C	P53910	189 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	SED1	Q01589	338 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	CIK1	Q01649	594 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	SKO1	Q02100	647 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	MET14	Q02196	202 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	RPL6A	Q02326	176 aa	Known RBP	0.82	□□□□□ -2.28
PAM16	YJL104W	UTP6	Q02354	440 aa	Known RBP	0.82	□□□□□ -2.28
PAM16	YJL104W	HOT1	Q03213	719 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	NHP10	Q03435	203 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	FMN1	Q03778	218 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	RAD30	Q04049	632 aa		0.82	□□□□□ -2.28
PAM16	YJL104W	MSC3	Q05812	728 aa		0.82	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms