RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C TAF10Q12030 206 aa1.8□□□□□ -2.12
RTT101YJL047C SLM3Q12093 417 aa1.8□□□□□ -2.12
RTT101YJL047C TPT1Q12272 230 aaKnown RBP1.8□□□□□ -2.12
RTT101YJL047C YLR111WQ12528 110 aa1.8□□□□□ -2.12
RTT101YJL047C PET20Q99373 253 aa1.8□□□□□ -2.12
RTT101YJL047C TPI1P00942 248 aaKnown RBP1.79□□□□□ -2.12
RTT101YJL047C PET494P07390 489 aaPredicted RBP1.79□□□□□ -2.12
RTT101YJL047C GCY1P14065 312 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
RTT101YJL047C TFS1P14306 219 aa1.79□□□□□ -2.12
RTT101YJL047C CBS2P14905 389 aa1.79□□□□□ -2.12
RTT101YJL047C EXO70P19658 623 aa1.79□□□□□ -2.12
RTT101YJL047C PHO80P20052 293 aa1.79□□□□□ -2.12
RTT101YJL047C TIP1P27654 210 aaPredicted RBP1.79□□□□□ -2.12
RTT101YJL047C ITR2P30606 609 aa1.79□□□□□ -2.12
RTT101YJL047C SPS18P32572 300 aa1.79□□□□□ -2.12
RTT101YJL047C TOD6P34219 525 aa1.79□□□□□ -2.12
RTT101YJL047C JEN1P36035 616 aa1.79□□□□□ -2.12
RTT101YJL047C SDS24P38314 527 aa1.79□□□□□ -2.12
RTT101YJL047C COG3P40094 801 aa1.79□□□□□ -2.12
RTT101YJL047C SFH5P47008 294 aa1.79□□□□□ -2.12
RTT101YJL047C CCE1Q03702 353 aa1.79□□□□□ -2.12
RTT101YJL047C PEX12Q04370 399 aa1.79□□□□□ -2.12
RTT101YJL047C SWF1Q04629 336 aa1.79□□□□□ -2.12
RTT101YJL047C GLO2Q05584 274 aa1.79□□□□□ -2.12
RTT101YJL047C SFH1Q06168 426 aa1.79□□□□□ -2.12
RTT101YJL047C DXO1Q06349 442 aa1.79□□□□□ -2.12
RTT101YJL047C YEH2Q07950 538 aa1.79□□□□□ -2.12
RTT101YJL047C DDC1Q08949 612 aa1.79□□□□□ -2.12
RTT101YJL047C YPL150WQ12152 901 aa1.79□□□□□ -2.12
RTT101YJL047C YCT1Q12235 531 aa1.79□□□□□ -2.12
RTT101YJL047C RDL1Q12305 139 aaKnown RBP1.79□□□□□ -2.12
RTT101YJL047C LSO2Q3E772 92 aaKnown RBP1.79□□□□□ -2.12
RTT101YJL047C REP1P03871 373 aa1.79□□□□□ -2.12
RTT101YJL047C YAR066WP0CX18 203 aa1.79□□□□□ -2.12
RTT101YJL047C YHR214WP0CX19 203 aa1.79□□□□□ -2.12
RTT101YJL047C CHA1P25379 360 aaKnown RBP1.79□□□□□ -2.12
RTT101YJL047C RPL16BP26785 198 aaKnown RBP1.79□□□□□ -2.12
RTT101YJL047C PUB1P32588 453 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
RTT101YJL047C MCH2P36032 473 aa1.79□□□□□ -2.12
RTT101YJL047C HMT1P38074 348 aa1.79□□□□□ -2.12
RTT101YJL047C ECM13P38195 257 aa1.79□□□□□ -2.12
RTT101YJL047C YBR062CP38239 180 aa1.79□□□□□ -2.12
RTT101YJL047C YBR137WP38276 179 aa1.79□□□□□ -2.12
RTT101YJL047C GRE3P38715 327 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
RTT101YJL047C VRG4P40107 337 aa1.79□□□□□ -2.12
RTT101YJL047C YIL169CP40442 995 aa1.79□□□□□ -2.12
RTT101YJL047C PRM10P42946 383 aa1.79□□□□□ -2.12
RTT101YJL047C CIN2P46670 268 aa1.79□□□□□ -2.12
RTT101YJL047C TRM9P49957 279 aa1.79□□□□□ -2.12
RTT101YJL047C PRP24P49960 444 aaKnown RBP1.79□□□□□ -2.12
RTT101YJL047C YGL235WP53071 178 aa1.79□□□□□ -2.12
RTT101YJL047C MRM2P53123 320 aa1.79□□□□□ -2.12
RTT101YJL047C GOR1P53839 350 aa1.79□□□□□ -2.12
RTT101YJL047C ASI3P53983 676 aa1.79□□□□□ -2.12
RTT101YJL047C RNY1Q02933 434 aaKnown RBP1.79□□□□□ -2.12
RTT101YJL047C YDL114WQ07530 308 aa1.79□□□□□ -2.12
RTT101YJL047C MFG1Q07684 458 aa1.79□□□□□ -2.12
RTT101YJL047C THI20Q08224 551 aa1.79□□□□□ -2.12
RTT101YJL047C YOR114WQ12219 294 aa1.79□□□□□ -2.12
RTT101YJL047C ICT1Q12385 394 aa1.79□□□□□ -2.12
RTT101YJL047C IZH4Q99393 312 aa1.79□□□□□ -2.12
RTT101YJL047C BI2P03873 423 aa1.78□□□□□ -2.12
RTT101YJL047C SEN2P16658 377 aa1.78□□□□□ -2.12
RTT101YJL047C GLN3P18494 730 aa1.78□□□□□ -2.12
RTT101YJL047C PMT2P31382 759 aa1.78□□□□□ -2.12
RTT101YJL047C KAR9P32526 644 aa1.78□□□□□ -2.12
RTT101YJL047C SGE1P33335 543 aa1.78□□□□□ -2.12
RTT101YJL047C YKL075CP36083 450 aa1.78□□□□□ -2.12
RTT101YJL047C GOS1P38736 223 aa1.78□□□□□ -2.12
RTT101YJL047C SEO1P39709 593 aa1.78□□□□□ -2.12
RTT101YJL047C SOK1P40317 901 aa1.78□□□□□ -2.12
RTT101YJL047C RRT5P43607 289 aa1.78□□□□□ -2.12
RTT101YJL047C NUP57P48837 541 aa1.78□□□□□ -2.12
RTT101YJL047C YPS5P53057 165 aa1.78□□□□□ -2.12
RTT101YJL047C YLR152CP54072 576 aa1.78□□□□□ -2.12
RTT101YJL047C YML096WQ04489 525 aa1.78□□□□□ -2.12
RTT101YJL047C IRC10Q08118 586 aa1.78□□□□□ -2.12
RTT101YJL047C RDL2Q08742 149 aaKnown RBP1.78□□□□□ -2.12
RTT101YJL047C YLR112WQ12130 139 aa1.78□□□□□ -2.12
RTT101YJL047C USB1Q12208 290 aaKnown RBP1.78□□□□□ -2.12
RTT101YJL047C SME1Q12330 94 aaPredicted RBP1.78□□□□□ -2.12
RTT101YJL047C UTP23Q12339 254 aaKnown RBP1.78□□□□□ -2.12
RTT101YJL047C RPS3P05750 240 aaKnown RBP1.78□□□□□ -2.12
RTT101YJL047C DSF1P0CX08 502 aa1.78□□□□□ -2.12
RTT101YJL047C YNR073CP0CX09 502 aa1.78□□□□□ -2.12
RTT101YJL047C ZWF1P11412 505 aaKnown RBP1.78□□□□□ -2.12
RTT101YJL047C SLY1P22213 666 aa1.78□□□□□ -2.12
RTT101YJL047C PPH21P23594 369 aa1.78□□□□□ -2.12
RTT101YJL047C YCR022CP25620 114 aa1.78□□□□□ -2.12
RTT101YJL047C CTS1P29029 562 aa1.78□□□□□ -2.12
RTT101YJL047C MUD1P32605 298 aaKnown RBP1.78□□□□□ -2.12
RTT101YJL047C NUF2P33895 451 aa1.78□□□□□ -2.12
RTT101YJL047C SRP102P36057 244 aaPredicted RBP1.78□□□□□ -2.12
RTT101YJL047C SPC34P36131 295 aa1.78□□□□□ -2.12
RTT101YJL047C DER1P38307 211 aa1.78□□□□□ -2.12
RTT101YJL047C YBP1P38315 674 aa1.78□□□□□ -2.12
RTT101YJL047C CUE1P38428 203 aa1.78□□□□□ -2.12
RTT101YJL047C NDT80P38830 627 aa1.78□□□□□ -2.12
RTT101YJL047C PET8P38921 284 aa1.78□□□□□ -2.12
RTT101YJL047C CSM2P40465 213 aa1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms