RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C AMN1P38285 549 aaPredicted RBP8.68□□□□□ -1.02
MET28YIR017C SDP1P40479 209 aa8.68□□□□□ -1.02
MET28YIR017C FMC1P40491 155 aa8.68□□□□□ -1.02
MET28YIR017C VOA1P53262 265 aa8.68□□□□□ -1.02
MET28YIR017C APM1Q00776 475 aaPredicted RBP8.68□□□□□ -1.02
MET28YIR017C NOG1Q02892 647 aaKnown RBP8.68□□□□□ -1.02
MET28YIR017C BNA7Q04066 261 aa8.68□□□□□ -1.02
MET28YIR017C GAS2Q06135 555 aa8.68□□□□□ -1.02
MET28YIR017C MIM1Q08176 113 aa8.68□□□□□ -1.02
MET28YIR017C YDL176WQ12027 708 aa8.68□□□□□ -1.02
MET28YIR017C FLO9P39712 1322 aa8.68□□□□□ -1.02
MET28YIR017C MSW1P04803 379 aa8.67□□□□□ -1.02
MET28YIR017C SPO7P18410 259 aa8.67□□□□□ -1.02
MET28YIR017C STE50P25344 346 aa8.67□□□□□ -1.02
MET28YIR017C PTC6P25646 442 aa8.67□□□□□ -1.02
MET28YIR017C CAM1P29547 415 aaKnown RBP8.67□□□□□ -1.02
MET28YIR017C IRC5P43610 853 aa8.67□□□□□ -1.02
MET28YIR017C BSC5P53755 489 aa8.67□□□□□ -1.02
MET28YIR017C RVB1Q03940 463 aaKnown RBP8.67□□□□□ -1.02
MET28YIR017C YLR173WQ06247 608 aa8.67□□□□□ -1.02
MET28YIR017C YLR352WQ06479 807 aa8.67□□□□□ -1.02
MET28YIR017C AIM6Q07716 390 aa8.67□□□□□ -1.02
MET28YIR017C KIN28P06242 306 aa8.66□□□□□ -1.02
MET28YIR017C FUN19P28003 413 aaPredicted RBP8.66□□□□□ -1.02
MET28YIR017C SDS22P36047 338 aa8.66□□□□□ -1.02
MET28YIR017C DTR1P38125 572 aa8.66□□□□□ -1.02
MET28YIR017C MGE1P38523 228 aa8.66□□□□□ -1.02
MET28YIR017C NVJ1P38881 321 aa8.66□□□□□ -1.02
MET28YIR017C RIX1P38883 763 aaPredicted RBP8.66□□□□□ -1.02
MET28YIR017C KAP120Q02932 1032 aa8.66□□□□□ -1.02
MET28YIR017C MAK3Q03503 176 aa8.66□□□□□ -1.02
MET28YIR017C CTS2Q06350 511 aa8.66□□□□□ -1.02
MET28YIR017C RRP9Q06506 573 aaKnown RBP8.66□□□□□ -1.02
MET28YIR017C IPK1Q06667 281 aa8.66□□□□□ -1.02
MET28YIR017C FMP45Q07651 309 aa8.66□□□□□ -1.02
MET28YIR017C THP3Q12049 470 aaKnown RBP8.66□□□□□ -1.02
MET28YIR017C BAG7Q12128 409 aa8.66□□□□□ -1.02
MET28YIR017C HMS1Q12398 434 aa8.66□□□□□ -1.02
MET28YIR017C YBR056W-AI2HB52 66 aa8.65□□□□□ -1.02
MET28YIR017C CPR2P23285 205 aa8.65□□□□□ -1.02
MET28YIR017C PPA2P28239 310 aa8.65□□□□□ -1.02
MET28YIR017C SOF1P33750 489 aaKnown RBP8.65□□□□□ -1.02
MET28YIR017C SRP102P36057 244 aaPredicted RBP8.65□□□□□ -1.02
MET28YIR017C YIL165CP40446 119 aa8.65□□□□□ -1.02
MET28YIR017C MSY1P48527 492 aa8.65□□□□□ -1.02
MET28YIR017C HSV2P50079 448 aaPredicted RBP8.65□□□□□ -1.02
MET28YIR017C SOK2P53438 785 aaPredicted RBP8.65□□□□□ -1.02
MET28YIR017C GRX3Q03835 250 aa8.65□□□□□ -1.02
MET28YIR017C YOR378WQ08902 515 aa8.65□□□□□ -1.02
MET28YIR017C ACF2Q12168 779 aa8.65□□□□□ -1.02
MET28YIR017C COX17Q12287 69 aa8.65□□□□□ -1.02
MET28YIR017C YHR214C-EQ8TGK0 99 aa8.65□□□□□ -1.02
MET28YIR017C KRR1P25586 316 aaPredicted RBP8.64□□□□□ -1.03
MET28YIR017C RPL5P26321 297 aaKnown RBP8.64□□□□□ -1.03
MET28YIR017C PUB1P32588 453 aaKnown RBP RIP-Chip data8.64□□□□□ -1.03not detected
MET28YIR017C MTC2P34246 357 aa8.64□□□□□ -1.03
MET28YIR017C FMP23P38231 175 aa8.64□□□□□ -1.03
MET28YIR017C GPI16P38875 610 aa8.64□□□□□ -1.03
MET28YIR017C XBP1P40489 647 aa8.64□□□□□ -1.03
MET28YIR017C PFS2P42841 465 aaKnown RBP8.64□□□□□ -1.03
MET28YIR017C DPB11P47027 764 aaPredicted RBP8.64□□□□□ -1.03
MET28YIR017C ADO1P47143 340 aaKnown RBP8.64□□□□□ -1.03
MET28YIR017C RSM24Q03976 319 aa8.64□□□□□ -1.03
MET28YIR017C AGE1Q04412 482 aa8.64□□□□□ -1.03
MET28YIR017C NNT1Q05874 261 aa8.64□□□□□ -1.03
MET28YIR017C YOL114CQ12322 202 aa8.64□□□□□ -1.03
MET28YIR017C OPI3P05375 206 aa8.63□□□□□ -1.03
MET28YIR017C RPS13P05756 151 aaKnown RBP8.63□□□□□ -1.03
MET28YIR017C PRB1P09232 635 aa8.63□□□□□ -1.03
MET28YIR017C RPC34P32910 317 aa8.63□□□□□ -1.03
MET28YIR017C MRPL39P36533 70 aa8.63□□□□□ -1.03
MET28YIR017C UBX6P47049 396 aa8.63□□□□□ -1.03
MET28YIR017C YNR040WP53736 256 aa8.63□□□□□ -1.03
MET28YIR017C MRPL19P53875 158 aa8.63□□□□□ -1.03
MET28YIR017C YDR102CQ03864 110 aa8.63□□□□□ -1.03
MET28YIR017C MDM36Q06820 579 aa8.63□□□□□ -1.03
MET28YIR017C SYC1Q08553 188 aaPredicted RBP8.63□□□□□ -1.03
MET28YIR017C RTC5Q12108 567 aaKnown RBP8.63□□□□□ -1.03
MET28YIR017C PRS5Q12265 496 aaKnown RBP8.63□□□□□ -1.03
MET28YIR017C YDL180WQ12301 547 aa8.63□□□□□ -1.03
MET28YIR017C YPR1Q12458 312 aa8.63□□□□□ -1.03
MET28YIR017C HMG1P12683 1054 aa8.62□□□□□ -1.03
MET28YIR017C GIT1P25346 518 aa8.62□□□□□ -1.03
MET28YIR017C PUT3P25502 979 aaPredicted RBP8.62□□□□□ -1.03
MET28YIR017C AHC2P25649 128 aa8.62□□□□□ -1.03
MET28YIR017C YPK3P38070 525 aa8.62□□□□□ -1.03
MET28YIR017C YBR063CP38083 404 aa8.62□□□□□ -1.03
MET28YIR017C SLZ1P40167 298 aa8.62□□□□□ -1.03
MET28YIR017C PPT1P53043 513 aa8.62□□□□□ -1.03
MET28YIR017C SAY1P53324 424 aa8.62□□□□□ -1.03
MET28YIR017C PAU12P53343 120 aa8.62□□□□□ -1.03
MET28YIR017C GAL83Q04739 417 aa8.62□□□□□ -1.03
MET28YIR017C MRX8Q05473 314 aa8.62□□□□□ -1.03
MET28YIR017C STE18P18852 110 aa8.61□□□□□ -1.03
MET28YIR017C RPA135P22138 1203 aaKnown RBP8.61□□□□□ -1.03
MET28YIR017C RPL24BP24000 155 aaKnown RBP8.61□□□□□ -1.03
MET28YIR017C DPB2P24482 689 aaPredicted RBP8.61□□□□□ -1.03
MET28YIR017C FUN26P31381 517 aa8.61□□□□□ -1.03
MET28YIR017C VPS17P32913 551 aa8.61□□□□□ -1.03
MET28YIR017C THI2P38141 450 aa8.61□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 92.1 ms