RNA–Protein interactions for RNA: YIL138C

TPM2, Transcript of Minor isoform of tropomyosin, yeastyeast

Gene TPM2, Length 486 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM2YIL138C RPN8Q08723 338 aaKnown RBP1.88□□□□□ -2.11
TPM2YIL138C TAF10Q12030 206 aa1.88□□□□□ -2.11
TPM2YIL138C SLF1Q12034 447 aaKnown RBP1.88□□□□□ -2.11
TPM2YIL138C RTC5Q12108 567 aaKnown RBP1.88□□□□□ -2.11
TPM2YIL138C YPR1Q12458 312 aa1.88□□□□□ -2.11
TPM2YIL138C TY1B-NL2Q99337 1749 aaKnown RBP1.88□□□□□ -2.11
TPM2YIL138C REP1P03871 373 aa1.87□□□□□ -2.11
TPM2YIL138C SPS100P13130 326 aa1.87□□□□□ -2.11
TPM2YIL138C ZIP1P31111 875 aa1.87□□□□□ -2.11
TPM2YIL138C FMT1P32785 401 aa1.87□□□□□ -2.11
TPM2YIL138C DTR1P38125 572 aa1.87□□□□□ -2.11
TPM2YIL138C EFM1P38732 585 aa1.87□□□□□ -2.11
TPM2YIL138C UTP25P40498 721 aaKnown RBP1.87□□□□□ -2.11
TPM2YIL138C PFS2P42841 465 aaKnown RBP1.87□□□□□ -2.11
TPM2YIL138C COQ5P49017 307 aa1.87□□□□□ -2.11
TPM2YIL138C PRO2P54885 456 aaKnown RBP1.87□□□□□ -2.11
TPM2YIL138C SED5Q01590 340 aa1.87□□□□□ -2.11
TPM2YIL138C VPS20Q04272 221 aa1.87□□□□□ -2.11
TPM2YIL138C SAM4Q08985 325 aaKnown RBP1.87□□□□□ -2.11
TPM2YIL138C MDY2Q12285 212 aa1.87□□□□□ -2.11
TPM2YIL138C YAL067W-AQ8TGK6 75 aa1.87□□□□□ -2.11
TPM2YIL138C SIR4P11978 1358 aa1.86□□□□□ -2.11
TPM2YIL138C RPO41P13433 1351 aaKnown RBP1.86□□□□□ -2.11
TPM2YIL138C GCD2P12754 651 aaPredicted RBP1.86□□□□□ -2.11
TPM2YIL138C ERD1P16151 362 aa1.86□□□□□ -2.11
TPM2YIL138C PET18P25362 215 aa1.86□□□□□ -2.11
TPM2YIL138C ZRT1P32804 376 aa1.86□□□□□ -2.11
TPM2YIL138C BUD2P33314 1104 aa1.86□□□□□ -2.11
TPM2YIL138C TIP20P33891 701 aa1.86□□□□□ -2.11
TPM2YIL138C SWC5P38326 303 aa1.86□□□□□ -2.11
TPM2YIL138C PES4P39684 611 aa1.86□□□□□ -2.11
TPM2YIL138C IRC4Q03036 179 aa1.86□□□□□ -2.11
TPM2YIL138C MRX8Q05473 314 aa1.86□□□□□ -2.11
TPM2YIL138C MRX9Q07349 420 aaKnown RBP1.86□□□□□ -2.11
TPM2YIL138C YDL144CQ07589 356 aa1.86□□□□□ -2.11
TPM2YIL138C RDL2Q08742 149 aaKnown RBP1.86□□□□□ -2.11
TPM2YIL138C SAL1D6W196 494 aa1.85□□□□□ -2.11
TPM2YIL138C CBP2P03874 630 aaPredicted RBP1.85□□□□□ -2.11
TPM2YIL138C RAD23P32628 398 aaKnown RBP1.85□□□□□ -2.11
TPM2YIL138C CYM1P32898 989 aa1.85□□□□□ -2.11
TPM2YIL138C CBF5P33322 483 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
TPM2YIL138C DBP7P36120 742 aaKnown RBP1.85□□□□□ -2.11
TPM2YIL138C YDR089WP38966 869 aa1.85□□□□□ -2.11
TPM2YIL138C FET3P38993 636 aa1.85□□□□□ -2.11
TPM2YIL138C PMT4P46971 762 aa1.85□□□□□ -2.11
TPM2YIL138C YGR067CP53243 804 aa1.85□□□□□ -2.11
TPM2YIL138C TPC1P53257 314 aa1.85□□□□□ -2.11
TPM2YIL138C YPL080CQ02826 108 aa1.85□□□□□ -2.11
TPM2YIL138C INP1Q03694 420 aa1.85□□□□□ -2.11
TPM2YIL138C UTP15Q04305 513 aaKnown RBP1.85□□□□□ -2.11
TPM2YIL138C FAR10Q06001 478 aa1.85□□□□□ -2.11
TPM2YIL138C PIN3Q06449 215 aa1.85□□□□□ -2.11
TPM2YIL138C DTD1Q07648 150 aaKnown RBP1.85□□□□□ -2.11
TPM2YIL138C YOL085CQ99345 113 aa1.85□□□□□ -2.11
TPM2YIL138C RAD7P06779 565 aa1.84□□□□□ -2.11
TPM2YIL138C CAR2P07991 424 aaKnown RBP1.84□□□□□ -2.11
TPM2YIL138C RPS24AP0CX31 135 aaKnown RBP1.84□□□□□ -2.11
TPM2YIL138C RPS24BP0CX32 135 aaKnown RBP1.84□□□□□ -2.11
TPM2YIL138C MRPL20P22354 195 aaPredicted RBP1.84□□□□□ -2.11
TPM2YIL138C YKL162CP36052 402 aa1.84□□□□□ -2.11
TPM2YIL138C CTM1P38818 585 aa1.84□□□□□ -2.11
TPM2YIL138C DSE1P40077 573 aa1.84□□□□□ -2.11
TPM2YIL138C INA22P40576 216 aa1.84□□□□□ -2.11
TPM2YIL138C MPP10P47083 593 aaKnown RBP1.84□□□□□ -2.11
TPM2YIL138C RIB4P50861 169 aaPredicted RBP1.84□□□□□ -2.11
TPM2YIL138C FMP48P53233 369 aa1.84□□□□□ -2.11
TPM2YIL138C OKP1P53298 406 aa1.84□□□□□ -2.11
TPM2YIL138C YNL050CP53952 270 aa1.84□□□□□ -2.11
TPM2YIL138C INP2Q03824 705 aa1.84□□□□□ -2.11
TPM2YIL138C YMR244WQ04018 355 aa1.84□□□□□ -2.11
TPM2YIL138C SNX41Q04053 625 aa1.84□□□□□ -2.11
TPM2YIL138C YMR111CQ04461 462 aaPredicted RBP1.84□□□□□ -2.11
TPM2YIL138C YLR012CQ07927 99 aa1.84□□□□□ -2.11
TPM2YIL138C YDR018CQ12185 396 aa1.84□□□□□ -2.11
TPM2YIL138C PAA1Q12447 191 aaKnown RBP1.84□□□□□ -2.11
TPM2YIL138C FUS3P16892 353 aaKnown RBP1.83□□□□□ -2.12
TPM2YIL138C SAR1P20606 190 aaKnown RBP1.83□□□□□ -2.12
TPM2YIL138C INO2P26798 304 aa1.83□□□□□ -2.12
TPM2YIL138C IME2P32581 645 aa1.83□□□□□ -2.12
TPM2YIL138C RFT1P38206 574 aaPredicted RBP1.83□□□□□ -2.12
TPM2YIL138C PET8P38921 284 aa1.83□□□□□ -2.12
TPM2YIL138C MNN9P39107 395 aaKnown RBP1.83□□□□□ -2.12
TPM2YIL138C RTR1P40084 226 aaPredicted RBP1.83□□□□□ -2.12
TPM2YIL138C UFE1P41834 346 aa1.83□□□□□ -2.12
TPM2YIL138C SDS23P53172 527 aa1.83□□□□□ -2.12
TPM2YIL138C VOA1P53262 265 aa1.83□□□□□ -2.12
TPM2YIL138C YGR266WP53326 701 aa1.83□□□□□ -2.12
TPM2YIL138C DBP6P53734 629 aaKnown RBP1.83□□□□□ -2.12
TPM2YIL138C PBP4Q07362 185 aaKnown RBP1.83□□□□□ -2.12
TPM2YIL138C UTP23Q12339 254 aaKnown RBP1.83□□□□□ -2.12
TPM2YIL138C PRM4Q12498 284 aa1.83□□□□□ -2.12
TPM2YIL138C LYS2P07702 1392 aa1.83□□□□□ -2.12
TPM2YIL138C SKG6P32900 734 aaPredicted RBP1.82□□□□□ -2.12
TPM2YIL138C YKL187CP34231 750 aa1.82□□□□□ -2.12
TPM2YIL138C ZRT3P34240 503 aa1.82□□□□□ -2.12
TPM2YIL138C RCK1P38622 512 aa1.82□□□□□ -2.12
TPM2YIL138C YHR035WP38769 630 aa1.82□□□□□ -2.12
TPM2YIL138C SOP4P39543 234 aaPredicted RBP1.82□□□□□ -2.12
TPM2YIL138C BDH1P39714 382 aa1.82□□□□□ -2.12
TPM2YIL138C FRT2P39734 528 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms