RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W HRB1P38922 454 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
BCD1YHR040W LYS12P40495 371 aaKnown RBP3.19□□□□□ -1.9
BCD1YHR040W STB1P42845 420 aa3.19□□□□□ -1.9
BCD1YHR040W PRM10P42946 383 aa3.19□□□□□ -1.9
BCD1YHR040W HOC1P47124 396 aa3.19□□□□□ -1.9
BCD1YHR040W YGR149WP48236 432 aa3.19□□□□□ -1.9
BCD1YHR040W RAD17P48581 401 aa3.19□□□□□ -1.9
BCD1YHR040W COQ5P49017 307 aa3.19□□□□□ -1.9
BCD1YHR040W COS10P52924 374 aa3.19□□□□□ -1.9
BCD1YHR040W ARO8P53090 500 aaKnown RBP3.19□□□□□ -1.9
BCD1YHR040W SLI1P53304 468 aa3.19□□□□□ -1.9
BCD1YHR040W YNL181WP53878 407 aa3.19□□□□□ -1.9
BCD1YHR040W TDA7P53882 636 aaPredicted RBP3.19□□□□□ -1.9
BCD1YHR040W YPL113CQ02961 396 aa3.19□□□□□ -1.9
BCD1YHR040W TDA1Q03533 586 aa3.19□□□□□ -1.9
BCD1YHR040W GPI17Q04080 534 aa3.19□□□□□ -1.9
BCD1YHR040W RPC11Q04307 110 aaPredicted RBP3.19□□□□□ -1.9
BCD1YHR040W PEX10Q05568 337 aa3.19□□□□□ -1.9
BCD1YHR040W RRP45Q05636 305 aaKnown RBP3.19□□□□□ -1.9
BCD1YHR040W PDR8Q06149 701 aa3.19□□□□□ -1.9
BCD1YHR040W ATG10Q07879 167 aa3.19□□□□□ -1.9
BCD1YHR040W FDH1Q08911 376 aa3.19□□□□□ -1.9
BCD1YHR040W RKM1Q08961 583 aaPredicted RBP3.19□□□□□ -1.9
BCD1YHR040W YOR114WQ12219 294 aa3.19□□□□□ -1.9
BCD1YHR040W YGK3Q12222 375 aaPredicted RBP3.19□□□□□ -1.9
BCD1YHR040W YDL007C-AQ2V2Q0 85 aa3.19□□□□□ -1.9
BCD1YHR040W LAG2Q92325 660 aa3.19□□□□□ -1.9
BCD1YHR040W YOL163WP0CF20 169 aa3.18□□□□□ -1.9
BCD1YHR040W YAP1P19880 650 aaKnown RBP3.18□□□□□ -1.9
BCD1YHR040W RPB5P20434 215 aa3.18□□□□□ -1.9
BCD1YHR040W BUB3P26449 341 aa3.18□□□□□ -1.9
BCD1YHR040W IDH1P28834 360 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
BCD1YHR040W OAC1P32332 324 aa3.18□□□□□ -1.9
BCD1YHR040W VPS17P32913 551 aa3.18□□□□□ -1.9
BCD1YHR040W YBR144CP34215 104 aa3.18□□□□□ -1.9
BCD1YHR040W SNU114P36048 1008 aaKnown RBP3.18□□□□□ -1.9
BCD1YHR040W YBR139WP38109 508 aa3.18□□□□□ -1.9
BCD1YHR040W MBA1P38300 278 aa3.18□□□□□ -1.9
BCD1YHR040W NTC20P38302 140 aaPredicted RBP3.18□□□□□ -1.9
BCD1YHR040W DED81P38707 554 aaKnown RBP3.18□□□□□ -1.9
BCD1YHR040W YHR035WP38769 630 aa3.18□□□□□ -1.9
BCD1YHR040W SBE22P38814 852 aa3.18□□□□□ -1.9
BCD1YHR040W NVJ1P38881 321 aa3.18□□□□□ -1.9
BCD1YHR040W YEL020CP39994 560 aa3.18□□□□□ -1.9
BCD1YHR040W FMP52P40008 231 aa3.18□□□□□ -1.9
BCD1YHR040W PRE6P40303 254 aaKnown RBP3.18□□□□□ -1.9
BCD1YHR040W PAC11P40960 533 aa3.18□□□□□ -1.9
BCD1YHR040W DPB11P47027 764 aaPredicted RBP3.18□□□□□ -1.9
BCD1YHR040W UBX6P47049 396 aa3.18□□□□□ -1.9
BCD1YHR040W NUP57P48837 541 aa3.18□□□□□ -1.9
BCD1YHR040W VPS73P53142 486 aaKnown RBP3.18□□□□□ -1.9
BCD1YHR040W YGL101WP53144 215 aa3.18□□□□□ -1.9
BCD1YHR040W LSG1P53145 640 aaKnown RBP3.18□□□□□ -1.9
BCD1YHR040W RPN14P53196 417 aa3.18□□□□□ -1.9
BCD1YHR040W BUD17P53727 317 aa3.18□□□□□ -1.9
BCD1YHR040W RHO5P53879 331 aaKnown RBP3.18□□□□□ -1.9
BCD1YHR040W RHO3Q00245 231 aaKnown RBP3.18□□□□□ -1.9
BCD1YHR040W SNZ1Q03148 297 aa3.18□□□□□ -1.9
BCD1YHR040W YMR087WQ04299 284 aa3.18□□□□□ -1.9
BCD1YHR040W PLM2Q04383 521 aa3.18□□□□□ -1.9
BCD1YHR040W YMR310CQ04867 317 aaPredicted RBP3.18□□□□□ -1.9
BCD1YHR040W BOP2Q06150 570 aa3.18□□□□□ -1.9
BCD1YHR040W PHO92Q06390 306 aa3.18□□□□□ -1.9
BCD1YHR040W GPN3Q06543 272 aa3.18□□□□□ -1.9
BCD1YHR040W YFH1Q07540 174 aa3.18□□□□□ -1.9
BCD1YHR040W YDL242WQ07746 117 aa3.18□□□□□ -1.9
BCD1YHR040W CRT10Q08226 957 aa3.18□□□□□ -1.9
BCD1YHR040W TGS1Q12052 315 aa3.18□□□□□ -1.9
BCD1YHR040W DAP1Q12091 152 aa3.18□□□□□ -1.9
BCD1YHR040W SIA1Q12212 622 aa3.18□□□□□ -1.9
BCD1YHR040W INP53Q12271 1107 aa3.18□□□□□ -1.9
BCD1YHR040W PCL9Q12477 304 aa3.18□□□□□ -1.9
BCD1YHR040W SUS1Q6WNK7 96 aa3.18□□□□□ -1.9
BCD1YHR040W QCR7P00128 127 aa3.17□□□□□ -1.9
BCD1YHR040W COX1P00401 534 aa3.17□□□□□ -1.9
BCD1YHR040W AAC1P04710 309 aa3.17□□□□□ -1.9
BCD1YHR040W PDE2P06776 526 aa3.17□□□□□ -1.9
BCD1YHR040W ADE5,7P07244 802 aaKnown RBP3.17□□□□□ -1.9
BCD1YHR040W NFT1P0CE68 1218 aa3.17□□□□□ -1.9
BCD1YHR040W SNF6P18888 332 aa3.17□□□□□ -1.9
BCD1YHR040W MCK1P21965 375 aaKnown RBP3.17□□□□□ -1.9
BCD1YHR040W RPL24BP24000 155 aaKnown RBP3.17□□□□□ -1.9
BCD1YHR040W PTP1P25044 335 aa3.17□□□□□ -1.9
BCD1YHR040W HSP30P25619 332 aa3.17□□□□□ -1.9
BCD1YHR040W PTC6P25646 442 aa3.17□□□□□ -1.9
BCD1YHR040W AHC2P25649 128 aa3.17□□□□□ -1.9
BCD1YHR040W ERG1P32476 496 aaKnown RBP3.17□□□□□ -1.9
BCD1YHR040W GSH1P32477 678 aa3.17□□□□□ -1.9
BCD1YHR040W MKK1P32490 508 aa3.17□□□□□ -1.9
BCD1YHR040W SOF1P33750 489 aaKnown RBP3.17□□□□□ -1.9
BCD1YHR040W YOR062CP36025 268 aa3.17□□□□□ -1.9
BCD1YHR040W ELF1P36053 145 aa3.17□□□□□ -1.9
BCD1YHR040W MRPL4P36517 319 aa3.17□□□□□ -1.9
BCD1YHR040W GPX2P38143 162 aa3.17□□□□□ -1.9
BCD1YHR040W BNA4P38169 460 aa3.17□□□□□ -1.9
BCD1YHR040W RPS20P38701 121 aaKnown RBP3.17□□□□□ -1.9
BCD1YHR040W MLH1P38920 769 aa3.17□□□□□ -1.9
BCD1YHR040W PRP39P39682 629 aaKnown RBP3.17□□□□□ -1.9
BCD1YHR040W YAL037WP39728 267 aa3.17□□□□□ -1.9
BCD1YHR040W SER3P40054 469 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms