RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W SNF12P53628 566 aa5.63□□□□□ -1.51
MSP1YGR028W MRP51Q02950 344 aa5.63□□□□□ -1.51
MSP1YGR028W RNH202Q05635 350 aa5.63□□□□□ -1.51
MSP1YGR028W RAF1Q06891 181 aa5.63□□□□□ -1.51
MSP1YGR028W CRT10Q08226 957 aa5.63□□□□□ -1.51
MSP1YGR028W SKI7Q08491 747 aaPredicted RBP5.63□□□□□ -1.51
MSP1YGR028W OSW1Q08692 278 aa5.63□□□□□ -1.51
MSP1YGR028W HNT3Q08702 217 aa5.63□□□□□ -1.51
MSP1YGR028W MED2Q12124 431 aa5.63□□□□□ -1.51
MSP1YGR028W NCE102Q12207 173 aaRIP-Chip data5.63□□□□□ -1.51not detected
MSP1YGR028W SFM1Q12314 213 aa5.63□□□□□ -1.51
MSP1YGR028W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
MSP1YGR028W MHF2Q3E829 80 aa5.63□□□□□ -1.51
MSP1YGR028W ATP2P00830 511 aaKnown RBP5.62□□□□□ -1.51
MSP1YGR028W YPK2P18961 677 aa5.62□□□□□ -1.51
MSP1YGR028W RPB8P20436 146 aa5.62□□□□□ -1.51
MSP1YGR028W REC107P21651 314 aa5.62□□□□□ -1.51
MSP1YGR028W ITR2P30606 609 aa5.62□□□□□ -1.51
MSP1YGR028W SWH1P35845 1188 aa5.62□□□□□ -1.51
MSP1YGR028W YGP1P38616 354 aaKnown RBP5.62□□□□□ -1.51
MSP1YGR028W ARN2P38724 620 aa5.62□□□□□ -1.51
MSP1YGR028W CIN4P39110 191 aa5.62□□□□□ -1.51
MSP1YGR028W GAT2P40209 560 aa5.62□□□□□ -1.51
MSP1YGR028W GCN20P43535 752 aaKnown RBP5.62□□□□□ -1.51
MSP1YGR028W MRK1P50873 501 aa5.62□□□□□ -1.51
MSP1YGR028W RBG2P53295 368 aaKnown RBP5.62□□□□□ -1.51
MSP1YGR028W SVL3Q03088 825 aaKnown RBP5.62□□□□□ -1.51
MSP1YGR028W NGL2Q03264 515 aaKnown RBP5.62□□□□□ -1.51
MSP1YGR028W ACL4Q03771 387 aa5.62□□□□□ -1.51
MSP1YGR028W PEX12Q04370 399 aa5.62□□□□□ -1.51
MSP1YGR028W ULA1Q12059 462 aa5.62□□□□□ -1.51
MSP1YGR028W MRX4Q12467 430 aa5.62□□□□□ -1.51
MSP1YGR028W ADF1Q2V2Q1 113 aa5.62□□□□□ -1.51
MSP1YGR028W CDC36P06100 191 aaPredicted RBP5.61□□□□□ -1.51
MSP1YGR028W PDA1P16387 420 aaKnown RBP5.61□□□□□ -1.51
MSP1YGR028W PWP1P21304 576 aaKnown RBP5.61□□□□□ -1.51
MSP1YGR028W CMK2P22517 447 aa5.61□□□□□ -1.51
MSP1YGR028W RHB1P25378 209 aa5.61□□□□□ -1.51
MSP1YGR028W YCR100CP25606 316 aa5.61□□□□□ -1.51
MSP1YGR028W TIM12P32830 109 aa5.61□□□□□ -1.51
MSP1YGR028W PPZ2P33329 710 aa5.61□□□□□ -1.51
MSP1YGR028W MRPL39P36533 70 aa5.61□□□□□ -1.51
MSP1YGR028W KRE29P40026 464 aa5.61□□□□□ -1.51
MSP1YGR028W COG3P40094 801 aa5.61□□□□□ -1.51
MSP1YGR028W IDP2P41939 412 aa5.61□□□□□ -1.51
MSP1YGR028W IRC7P43623 340 aa5.61□□□□□ -1.51
MSP1YGR028W YNR062CP53748 327 aa5.61□□□□□ -1.51
MSP1YGR028W KAP120Q02932 1032 aa5.61□□□□□ -1.51
MSP1YGR028W SPC2Q04969 178 aa5.61□□□□□ -1.51
MSP1YGR028W DBP9Q06218 594 aaKnown RBP5.61□□□□□ -1.51
MSP1YGR028W IRC19Q07843 230 aa5.61□□□□□ -1.51
MSP1YGR028W YDL180WQ12301 547 aa5.61□□□□□ -1.51
MSP1YGR028W CDC39P25655 2108 aaKnown RBP5.6□□□□□ -1.51
MSP1YGR028W RHO1P06780 209 aaKnown RBP5.6□□□□□ -1.51
MSP1YGR028W YOL163WP0CF20 169 aa5.6□□□□□ -1.51
MSP1YGR028W IDH1P28834 360 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
MSP1YGR028W SLC1P33333 303 aa5.6□□□□□ -1.51
MSP1YGR028W SKG1P36169 355 aa5.6□□□□□ -1.51
MSP1YGR028W RIB1P38066 345 aa5.6□□□□□ -1.51
MSP1YGR028W PDX3P38075 228 aaKnown RBP5.6□□□□□ -1.51
MSP1YGR028W YHL037CP38733 133 aa5.6□□□□□ -1.51
MSP1YGR028W SWD1P39706 426 aa5.6□□□□□ -1.51
MSP1YGR028W YMR144WP40214 342 aaKnown RBP5.6□□□□□ -1.51
MSP1YGR028W ATF1P40353 525 aa5.6□□□□□ -1.51
MSP1YGR028W CAK1P43568 368 aaPredicted RBP5.6□□□□□ -1.51
MSP1YGR028W IMD4P50094 524 aaKnown RBP5.6□□□□□ -1.51
MSP1YGR028W BRR6P53062 197 aa5.6□□□□□ -1.51
MSP1YGR028W SLD3P53135 668 aa5.6□□□□□ -1.51
MSP1YGR028W PCP1P53259 346 aa5.6□□□□□ -1.51
MSP1YGR028W TIM10P87108 93 aa5.6□□□□□ -1.51
MSP1YGR028W GTR1Q00582 310 aa5.6□□□□□ -1.51
MSP1YGR028W API2Q04413 109 aa5.6□□□□□ -1.51
MSP1YGR028W YPL191CQ08930 360 aa5.6□□□□□ -1.51
MSP1YGR028W RLM1Q12224 676 aa5.6□□□□□ -1.51
MSP1YGR028W PFK27Q12471 397 aaPredicted RBP5.6□□□□□ -1.51
MSP1YGR028W YOR343CQ12484 108 aa5.6□□□□□ -1.51
MSP1YGR028W DET1Q99288 334 aaKnown RBP5.6□□□□□ -1.51
MSP1YGR028W SEC16P48415 2195 aaKnown RBP5.59□□□□□ -1.51
MSP1YGR028W RNA1P11745 407 aaKnown RBP5.59□□□□□ -1.51
MSP1YGR028W SNC1P31109 117 aa5.59□□□□□ -1.51
MSP1YGR028W DPH5P32469 300 aaPredicted RBP5.59□□□□□ -1.51
MSP1YGR028W SOF1P33750 489 aaKnown RBP5.59□□□□□ -1.51
MSP1YGR028W JEN1P36035 616 aa5.59□□□□□ -1.51
MSP1YGR028W SRO77P38163 1010 aa5.59□□□□□ -1.51
MSP1YGR028W RBG1P39729 369 aa5.59□□□□□ -1.51
MSP1YGR028W PAC2P39937 518 aa5.59□□□□□ -1.51
MSP1YGR028W AVT7P40501 490 aa5.59□□□□□ -1.51
MSP1YGR028W NAS2P40555 220 aa5.59□□□□□ -1.51
MSP1YGR028W SPR6Q01684 191 aa5.59□□□□□ -1.51
MSP1YGR028W SCS7Q03529 384 aa5.59□□□□□ -1.51
MSP1YGR028W SPC24Q04477 213 aa5.59□□□□□ -1.51
MSP1YGR028W SYO1Q07395 620 aa5.59□□□□□ -1.51
MSP1YGR028W PSR1Q07800 427 aa5.59□□□□□ -1.51
MSP1YGR028W HRT1Q08273 121 aa5.59□□□□□ -1.51
MSP1YGR028W TMC1Q08422 150 aaPredicted RBP5.59□□□□□ -1.51
MSP1YGR028W YOR097CQ12274 175 aaPredicted RBP5.59□□□□□ -1.51
MSP1YGR028W SET6Q12529 373 aa5.59□□□□□ -1.51
MSP1YGR028W YKL187CP34231 750 aa5.58□□□□□ -1.52
MSP1YGR028W ELF1P36053 145 aa5.58□□□□□ -1.52
MSP1YGR028W CHK1P38147 527 aa5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 44.3 ms