RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W MLH3Q12083 715 aa3.72□□□□□ -1.81
UBP6YFR010W YDR018CQ12185 396 aa3.72□□□□□ -1.81
UBP6YFR010W ARF1P11076 181 aaKnown RBP3.71□□□□□ -1.82
UBP6YFR010W AMD1P15274 810 aaKnown RBP3.71□□□□□ -1.82
UBP6YFR010W IDP1P21954 428 aaKnown RBP3.71□□□□□ -1.82
UBP6YFR010W CDC10P25342 322 aaKnown RBP3.71□□□□□ -1.82
UBP6YFR010W KAR9P32526 644 aa3.71□□□□□ -1.82
UBP6YFR010W ATO2P32907 282 aa3.71□□□□□ -1.82
UBP6YFR010W ECM15P35195 104 aa3.71□□□□□ -1.82
UBP6YFR010W MRPL17P36528 281 aa3.71□□□□□ -1.82
UBP6YFR010W APL3P38065 1025 aa3.71□□□□□ -1.82
UBP6YFR010W WSC4P38739 605 aa3.71□□□□□ -1.82
UBP6YFR010W ANS1P38832 159 aa3.71□□□□□ -1.82
UBP6YFR010W RMD6P39975 231 aa3.71□□□□□ -1.82
UBP6YFR010W SMB1P40018 196 aaKnown RBP3.71□□□□□ -1.82
UBP6YFR010W HPM1P40481 377 aa3.71□□□□□ -1.82
UBP6YFR010W MRPL49P40858 161 aaPredicted RBP3.71□□□□□ -1.82
UBP6YFR010W YFL040WP43562 540 aa3.71□□□□□ -1.82
UBP6YFR010W TOS2P50078 622 aa3.71□□□□□ -1.82
UBP6YFR010W UBC11P52492 156 aa3.71□□□□□ -1.82
UBP6YFR010W ALG13P53178 202 aa3.71□□□□□ -1.82
UBP6YFR010W SNX41Q04053 625 aa3.71□□□□□ -1.82
UBP6YFR010W YMR315WQ04869 349 aaKnown RBP3.71□□□□□ -1.82
UBP6YFR010W NEJ1Q06148 342 aa3.71□□□□□ -1.82
UBP6YFR010W POM33Q12164 279 aa3.71□□□□□ -1.82
UBP6YFR010W AGC1Q12482 902 aa3.71□□□□□ -1.82
UBP6YFR010W YKL033W-AQ86ZR7 236 aa3.71□□□□□ -1.82
UBP6YFR010W ILV1P00927 576 aaKnown RBP3.7□□□□□ -1.82
UBP6YFR010W TUB1P09733 447 aaKnown RBP3.7□□□□□ -1.82
UBP6YFR010W YPK1P12688 680 aaKnown RBP3.7□□□□□ -1.82
UBP6YFR010W CUP2P15315 225 aa3.7□□□□□ -1.82
UBP6YFR010W ARF2P19146 181 aaKnown RBP3.7□□□□□ -1.82
UBP6YFR010W MBR1P23493 339 aa3.7□□□□□ -1.82
UBP6YFR010W BUD23P25627 275 aaPredicted RBP3.7□□□□□ -1.82
UBP6YFR010W TOA2P32774 122 aa3.7□□□□□ -1.82
UBP6YFR010W NTF2P33331 125 aaKnown RBP3.7□□□□□ -1.82
UBP6YFR010W SKN1P33336 771 aa3.7□□□□□ -1.82
UBP6YFR010W HIS7P33734 552 aaKnown RBP3.7□□□□□ -1.82
UBP6YFR010W MSN2P33748 704 aa3.7□□□□□ -1.82
UBP6YFR010W IST2P38250 946 aa3.7□□□□□ -1.82
UBP6YFR010W GRE3P38715 327 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
UBP6YFR010W MET30P39014 640 aa3.7□□□□□ -1.82
UBP6YFR010W YAL037WP39728 267 aa3.7□□□□□ -1.82
UBP6YFR010W VPS52P39904 641 aa3.7□□□□□ -1.82
UBP6YFR010W ISC1P40015 477 aaKnown RBP3.7□□□□□ -1.82
UBP6YFR010W SYG1P40528 902 aa3.7□□□□□ -1.82
UBP6YFR010W YJL016WP47072 561 aa3.7□□□□□ -1.82
UBP6YFR010W BRR6P53062 197 aa3.7□□□□□ -1.82
UBP6YFR010W CPD1P53314 239 aa3.7□□□□□ -1.82
UBP6YFR010W AAT1Q01802 451 aa3.7□□□□□ -1.82
UBP6YFR010W RUB1Q03919 77 aa3.7□□□□□ -1.82
UBP6YFR010W YML053CQ04978 212 aa3.7□□□□□ -1.82
UBP6YFR010W GRX8Q05926 109 aa3.7□□□□□ -1.82
UBP6YFR010W MHR1Q06630 226 aa3.7□□□□□ -1.82
UBP6YFR010W MRX9Q07349 420 aaKnown RBP3.7□□□□□ -1.82
UBP6YFR010W YLR050CQ12155 161 aaKnown RBP3.7□□□□□ -1.82
UBP6YFR010W LCB4Q12246 624 aa3.7□□□□□ -1.82
UBP6YFR010W ATG34Q12292 412 aa3.7□□□□□ -1.82
UBP6YFR010W TPK3P05986 398 aa3.7□□□□□ -1.82
UBP6YFR010W SPT3P06844 337 aa3.7□□□□□ -1.82
UBP6YFR010W DCC1P25559 380 aa3.7□□□□□ -1.82
UBP6YFR010W PMT2P31382 759 aa3.7□□□□□ -1.82
UBP6YFR010W ELF1P36053 145 aa3.7□□□□□ -1.82
UBP6YFR010W HEK2P38199 381 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
UBP6YFR010W PCL5P38794 229 aa3.7□□□□□ -1.82
UBP6YFR010W YER186CP40101 306 aa3.7□□□□□ -1.82
UBP6YFR010W CSM2P40465 213 aa3.7□□□□□ -1.82
UBP6YFR010W GUF1P46943 645 aa3.7□□□□□ -1.82
UBP6YFR010W NUP57P48837 541 aa3.7□□□□□ -1.82
UBP6YFR010W USE1P53146 245 aa3.7□□□□□ -1.82
UBP6YFR010W PEX31P53203 462 aa3.7□□□□□ -1.82
UBP6YFR010W YNL095CP53932 642 aa3.7□□□□□ -1.82
UBP6YFR010W AIM34Q03673 198 aa3.7□□□□□ -1.82
UBP6YFR010W CCE1Q03702 353 aa3.7□□□□□ -1.82
UBP6YFR010W YML096WQ04489 525 aa3.7□□□□□ -1.82
UBP6YFR010W FRQ1Q06389 190 aa3.7□□□□□ -1.82
UBP6YFR010W NOC4Q06512 552 aaPredicted RBP3.7□□□□□ -1.82
UBP6YFR010W YOR283WQ12040 230 aaKnown RBP3.7□□□□□ -1.82
UBP6YFR010W YCT1Q12235 531 aa3.7□□□□□ -1.82
UBP6YFR010W RGT2Q12300 763 aa3.7□□□□□ -1.82
UBP6YFR010W RDI1Q12434 202 aa3.7□□□□□ -1.82
UBP6YFR010W YOR338WQ99326 363 aa3.7□□□□□ -1.82
UBP6YFR010W YOR1P53049 1477 aa3.69□□□□□ -1.82
UBP6YFR010W TPI1P00942 248 aaKnown RBP3.69□□□□□ -1.82
UBP6YFR010W GRX2P17695 143 aaKnown RBP3.69□□□□□ -1.82
UBP6YFR010W TYR1P20049 452 aa3.69□□□□□ -1.82
UBP6YFR010W POF1P25576 258 aa3.69□□□□□ -1.82
UBP6YFR010W HOM6P31116 359 aaKnown RBP3.69□□□□□ -1.82
UBP6YFR010W SPS18P32572 300 aa3.69□□□□□ -1.82
UBP6YFR010W ZRT1P32804 376 aa3.69□□□□□ -1.82
UBP6YFR010W RAD5P32849 1169 aaPredicted RBP3.69□□□□□ -1.82
UBP6YFR010W JEN1P36035 616 aa3.69□□□□□ -1.82
UBP6YFR010W YBR241CP38142 488 aa3.69□□□□□ -1.82
UBP6YFR010W YPT10P38146 199 aa3.69□□□□□ -1.82
UBP6YFR010W FMP23P38231 175 aa3.69□□□□□ -1.82
UBP6YFR010W YER076CP40049 302 aa3.69□□□□□ -1.82
UBP6YFR010W IRC18P47056 224 aa3.69□□□□□ -1.82
UBP6YFR010W YIF1P53845 314 aaKnown RBP3.69□□□□□ -1.82
UBP6YFR010W ARL3Q02804 198 aa3.69□□□□□ -1.82
UBP6YFR010W HER2Q03557 464 aa3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms