RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W CDD1Q06549 142 aa5.31□□□□□ -1.56
LCP5YER127W GIS3Q12418 502 aa5.31□□□□□ -1.56
LCP5YER127W RAD1P06777 1100 aa5.3□□□□□ -1.56
LCP5YER127W PRB1P09232 635 aa5.3□□□□□ -1.56
LCP5YER127W GAL3P13045 520 aa5.3□□□□□ -1.56
LCP5YER127W OM45P16547 393 aa5.3□□□□□ -1.56
LCP5YER127W DEP1P31385 405 aa5.3□□□□□ -1.56
LCP5YER127W SUR1P33300 382 aa5.3□□□□□ -1.56
LCP5YER127W UTH1P36135 365 aa5.3□□□□□ -1.56
LCP5YER127W OSW5P40219 148 aa5.3□□□□□ -1.56
LCP5YER127W IGD1P43598 195 aa5.3□□□□□ -1.56
LCP5YER127W TIM8P57744 87 aa5.3□□□□□ -1.56
LCP5YER127W PRP38Q00723 242 aaPredicted RBP5.3□□□□□ -1.56
LCP5YER127W MGR3Q04472 501 aa5.3□□□□□ -1.56
LCP5YER127W RTC5Q12108 567 aaKnown RBP5.3□□□□□ -1.56
LCP5YER127W LAA1P39526 2014 aa5.3□□□□□ -1.56
LCP5YER127W FMP27Q06179 2628 aa5.29□□□□□ -1.56
LCP5YER127W RPL40AP0CH08 128 aaKnown RBP5.29□□□□□ -1.56
LCP5YER127W RPL40BP0CH09 128 aaKnown RBP5.29□□□□□ -1.56
LCP5YER127W CMK2P22517 447 aa5.29□□□□□ -1.56
LCP5YER127W LDS1P31379 325 aa5.29□□□□□ -1.56
LCP5YER127W PRO2P54885 456 aaKnown RBP5.29□□□□□ -1.56
LCP5YER127W ENT5Q03769 411 aaKnown RBP5.29□□□□□ -1.56
LCP5YER127W YPQ1Q12010 308 aa5.29□□□□□ -1.56
LCP5YER127W ATP16Q12165 160 aa5.29□□□□□ -1.56
LCP5YER127W YDR262WQ12331 272 aa5.29□□□□□ -1.56
LCP5YER127W APC2Q12440 853 aa5.29□□□□□ -1.56
LCP5YER127W STE7P06784 515 aa5.28□□□□□ -1.56
LCP5YER127W YKT6P36015 200 aaKnown RBP5.28□□□□□ -1.56
LCP5YER127W SOL2P37262 315 aa5.28□□□□□ -1.56
LCP5YER127W DSE1P40077 573 aa5.28□□□□□ -1.56
LCP5YER127W ABZ2Q03266 374 aa5.28□□□□□ -1.56
LCP5YER127W MZM1Q03429 123 aaPredicted RBP5.28□□□□□ -1.56
LCP5YER127W BUR2Q05949 395 aa5.28□□□□□ -1.56
LCP5YER127W YLR177WQ06251 628 aa5.28□□□□□ -1.56
LCP5YER127W ABP140Q08641 628 aaKnown RBP5.28□□□□□ -1.56
LCP5YER127W SFM1Q12314 213 aa5.28□□□□□ -1.56
LCP5YER127W COS9P36034 407 aa5.27□□□□□ -1.57
LCP5YER127W GPI18P38211 433 aa5.27□□□□□ -1.57
LCP5YER127W YNL320WP42840 284 aa5.27□□□□□ -1.57
LCP5YER127W NAS6P50086 228 aa5.27□□□□□ -1.57
LCP5YER127W VAC7P53950 1165 aa5.27□□□□□ -1.57
LCP5YER127W TRM82Q03774 444 aa5.27□□□□□ -1.57
LCP5YER127W MSB2P32334 1306 aa5.26□□□□□ -1.57
LCP5YER127W FPR1P20081 114 aaKnown RBP5.26□□□□□ -1.57
LCP5YER127W MIR1P23641 311 aaKnown RBP5.26□□□□□ -1.57
LCP5YER127W PMT2P31382 759 aa5.26□□□□□ -1.57
LCP5YER127W PEX32P38292 413 aa5.26□□□□□ -1.57
LCP5YER127W AVT2P39981 480 aa5.26□□□□□ -1.57
LCP5YER127W NUP84P52891 726 aa5.26□□□□□ -1.57
LCP5YER127W FRE8Q12209 686 aa5.26□□□□□ -1.57
LCP5YER127W VPS63O13549 108 aa5.25□□□□□ -1.57
LCP5YER127W CDC37P06101 506 aaKnown RBP5.25□□□□□ -1.57
LCP5YER127W RPL18AP0CX49 186 aaKnown RBP5.25□□□□□ -1.57
LCP5YER127W RPL18BP0CX50 186 aaKnown RBP5.25□□□□□ -1.57
LCP5YER127W SGE1P33335 543 aa5.25□□□□□ -1.57
LCP5YER127W YBR241CP38142 488 aa5.25□□□□□ -1.57
LCP5YER127W END3P39013 349 aa5.25□□□□□ -1.57
LCP5YER127W AIM20P40451 204 aa5.25□□□□□ -1.57
LCP5YER127W YCH1P42937 148 aa5.25□□□□□ -1.57
LCP5YER127W AIM23P47015 356 aa5.25□□□□□ -1.57
LCP5YER127W SLT2Q00772 484 aa5.25□□□□□ -1.57
LCP5YER127W YDR115WQ04598 105 aa5.25□□□□□ -1.57
LCP5YER127W STE23Q06010 1027 aa5.25□□□□□ -1.57
LCP5YER127W CLP1Q08685 445 aaPredicted RBP5.25□□□□□ -1.57
LCP5YER127W MDY2Q12285 212 aa5.25□□□□□ -1.57
LCP5YER127W FOL3Q12676 427 aaPredicted RBP5.25□□□□□ -1.57
LCP5YER127W JIP3O13555 125 aa5.24□□□□□ -1.57
LCP5YER127W HSP26P15992 214 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57not detected
LCP5YER127W RRT12P25381 491 aa5.24□□□□□ -1.57
LCP5YER127W VMA5P31412 392 aaKnown RBP5.24□□□□□ -1.57
LCP5YER127W YDR089WP38966 869 aa5.24□□□□□ -1.57
LCP5YER127W UFE1P41834 346 aa5.24□□□□□ -1.57
LCP5YER127W MND1P53102 219 aa5.24□□□□□ -1.57
LCP5YER127W LSG1P53145 640 aaKnown RBP5.24□□□□□ -1.57
LCP5YER127W CDH1P53197 566 aa5.24□□□□□ -1.57
LCP5YER127W MRPS16Q02608 121 aa5.24□□□□□ -1.57
LCP5YER127W DDP1Q99321 188 aaKnown RBP5.24□□□□□ -1.57
LCP5YER127W UNG1P12887 359 aa5.23□□□□□ -1.57
LCP5YER127W RCK2P38623 610 aa5.23□□□□□ -1.57
LCP5YER127W MMS21P38632 267 aa5.23□□□□□ -1.57
LCP5YER127W FHL1P39521 936 aa5.23□□□□□ -1.57
LCP5YER127W SSO2P39926 295 aa5.23□□□□□ -1.57
LCP5YER127W HYR1P40581 163 aaKnown RBP5.23□□□□□ -1.57
LCP5YER127W CPR7P47103 393 aa5.23□□□□□ -1.57
LCP5YER127W HOP2P53187 214 aa5.23□□□□□ -1.57
LCP5YER127W YLR297WQ05899 129 aa5.23□□□□□ -1.57
LCP5YER127W RPL21BQ12672 160 aaKnown RBP5.23□□□□□ -1.57
LCP5YER127W TEL1P38110 2787 aa5.22□□□□□ -1.57
LCP5YER127W CDC42P19073 191 aa5.22□□□□□ -1.57
LCP5YER127W ERG9P29704 444 aa5.22□□□□□ -1.57
LCP5YER127W ECM13P38195 257 aa5.22□□□□□ -1.57
LCP5YER127W BMT2P38278 337 aa5.22□□□□□ -1.57
LCP5YER127W MOB2P43563 287 aa5.22□□□□□ -1.57
LCP5YER127W FLC3P53121 802 aa5.22□□□□□ -1.57
LCP5YER127W TSA2Q04120 196 aa5.22□□□□□ -1.57
LCP5YER127W TAF9Q05027 157 aa5.22□□□□□ -1.57
LCP5YER127W DDC1Q08949 612 aa5.22□□□□□ -1.57
LCP5YER127W CBP2P03874 630 aaPredicted RBP5.21□□□□□ -1.58
LCP5YER127W YPS1P32329 569 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 78.1 ms