RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C PRM4Q12498 284 aa-0.62□□□□□ -2.51
SPG3YDR504C REP1P03871 373 aa-0.63□□□□□ -2.51
SPG3YDR504C PUT1P09368 476 aa-0.63□□□□□ -2.51
SPG3YDR504C MSK1P32048 576 aa-0.63□□□□□ -2.51
SPG3YDR504C SUR2P38992 349 aa-0.63□□□□□ -2.51
SPG3YDR504C SEC13Q04491 297 aaKnown RBP-0.63□□□□□ -2.51
SPG3YDR504C DCI1Q08558 271 aa-0.63□□□□□ -2.51
SPG3YDR504C CPA1P07258 411 aaKnown RBP-0.64□□□□□ -2.51
SPG3YDR504C YIL012WP40551 113 aa-0.64□□□□□ -2.51
SPG3YDR504C ZIM17P42844 174 aa-0.64□□□□□ -2.51
SPG3YDR504C DTD1Q07648 150 aaKnown RBP-0.64□□□□□ -2.51
SPG3YDR504C ARF2P19146 181 aaKnown RBP-0.66□□□□□ -2.52
SPG3YDR504C TCD1P38756 429 aa-0.66□□□□□ -2.52
SPG3YDR504C YFL064CP43540 174 aa-0.66□□□□□ -2.52
SPG3YDR504C TPN1P53099 579 aa-0.66□□□□□ -2.52
SPG3YDR504C AAH1P53909 347 aa-0.66□□□□□ -2.52
SPG3YDR504C YLR287CQ05881 355 aa-0.66□□□□□ -2.52
SPG3YDR504C VIK1Q12045 647 aa-0.66□□□□□ -2.52
SPG3YDR504C RIO1Q12196 484 aaKnown RBP-0.66□□□□□ -2.52
SPG3YDR504C FSH3Q99369 266 aa-0.66□□□□□ -2.52
SPG3YDR504C YCR025CP25352 136 aa-0.67□□□□□ -2.52
SPG3YDR504C SCM4P32564 187 aa-0.67□□□□□ -2.52
SPG3YDR504C YBR219CP38317 127 aa-0.67□□□□□ -2.52
SPG3YDR504C TIF34P40217 347 aaKnown RBP-0.67□□□□□ -2.52
SPG3YDR504C CSI2Q08054 341 aa-0.67□□□□□ -2.52
SPG3YDR504C YPL278CQ08990 100 aa-0.67□□□□□ -2.52
SPG3YDR504C SCM3Q12334 223 aa-0.67□□□□□ -2.52
SPG3YDR504C ATG5Q12380 294 aa-0.67□□□□□ -2.52
SPG3YDR504C UTR1P21373 530 aa-0.68□□□□□ -2.52
SPG3YDR504C HXT2P23585 541 aa-0.68□□□□□ -2.52
SPG3YDR504C ERG9P29704 444 aa-0.68□□□□□ -2.52
SPG3YDR504C MRPL6P32904 214 aa-0.68□□□□□ -2.52
SPG3YDR504C GPX1P36014 167 aa-0.68□□□□□ -2.52
SPG3YDR504C HCH1P53834 153 aa-0.68□□□□□ -2.52
SPG3YDR504C NAT4Q04751 285 aa-0.68□□□□□ -2.52
SPG3YDR504C GLE1Q12315 538 aa-0.68□□□□□ -2.52
SPG3YDR504C RAD1P06777 1100 aa-0.69□□□□□ -2.52
SPG3YDR504C CKI1P20485 582 aa-0.69□□□□□ -2.52
SPG3YDR504C AVT6P40074 448 aa-0.69□□□□□ -2.52
SPG3YDR504C SNL1P40548 159 aa-0.69□□□□□ -2.52
SPG3YDR504C AIM45Q12480 344 aaKnown RBP-0.69□□□□□ -2.52
SPG3YDR504C NUP157P40064 1391 aaKnown RBP-0.7□□□□□ -2.52
SPG3YDR504C TOM40P23644 387 aaKnown RBP-0.7□□□□□ -2.52
SPG3YDR504C LTV1P34078 463 aa-0.7□□□□□ -2.52
SPG3YDR504C UPS2P35200 230 aa-0.7□□□□□ -2.52
SPG3YDR504C GON7P46984 123 aa-0.7□□□□□ -2.52
SPG3YDR504C YDL144CQ07589 356 aa-0.7□□□□□ -2.52
SPG3YDR504C PEX27Q08580 376 aa-0.7□□□□□ -2.52
SPG3YDR504C SRN2Q99176 213 aa-0.7□□□□□ -2.52
SPG3YDR504C MDH2P22133 377 aa-0.71□□□□□ -2.52
SPG3YDR504C MXR2P25566 168 aa-0.71□□□□□ -2.52
SPG3YDR504C PSO2P30620 661 aa-0.71□□□□□ -2.52
SPG3YDR504C GCG1P32656 232 aaKnown RBP-0.71□□□□□ -2.52
SPG3YDR504C IML3P38265 245 aa-0.71□□□□□ -2.52
SPG3YDR504C RDL2Q08742 149 aaKnown RBP-0.71□□□□□ -2.52
SPG3YDR504C SFG1Q12507 346 aa-0.71□□□□□ -2.52
SPG3YDR504C GRR1P24814 1151 aa-0.72□□□□□ -2.52
SPG3YDR504C RPL16BP26785 198 aaKnown RBP-0.72□□□□□ -2.52
SPG3YDR504C PRP24P49960 444 aaKnown RBP-0.72□□□□□ -2.52
SPG3YDR504C COG7P53195 279 aa-0.72□□□□□ -2.52
SPG3YDR504C NOT5Q12514 560 aaPredicted RBP-0.72□□□□□ -2.52
SPG3YDR504C FBA1P14540 359 aaKnown RBP-0.73□□□□□ -2.53
SPG3YDR504C YBR062CP38239 180 aa-0.73□□□□□ -2.53
SPG3YDR504C MLH1P38920 769 aa-0.73□□□□□ -2.53
SPG3YDR504C YHB1P39676 399 aaKnown RBP-0.73□□□□□ -2.53
SPG3YDR504C RPL13BP40212 199 aaKnown RBP-0.73□□□□□ -2.53
SPG3YDR504C GYL1Q04322 720 aa-0.73□□□□□ -2.53
SPG3YDR504C RRG1Q12167 365 aaPredicted RBP-0.73□□□□□ -2.53
SPG3YDR504C RPL13AQ12690 199 aaPredicted RBP-0.73□□□□□ -2.53
SPG3YDR504C ISD11Q6Q560 94 aa-0.73□□□□□ -2.53
SPG3YDR504C TPO5P36029 618 aa-0.74□□□□□ -2.53
SPG3YDR504C BMT5P40493 336 aa-0.74□□□□□ -2.53
SPG3YDR504C SNX4P47057 423 aa-0.74□□□□□ -2.53
SPG3YDR504C YMR114CQ04471 368 aaKnown RBP-0.74□□□□□ -2.53
SPG3YDR504C DSF1P0CX08 502 aa-0.75□□□□□ -2.53
SPG3YDR504C YNR073CP0CX09 502 aa-0.75□□□□□ -2.53
SPG3YDR504C SCL1P21243 252 aaKnown RBP-0.75□□□□□ -2.53
SPG3YDR504C IMP1P28627 190 aa-0.75□□□□□ -2.53
SPG3YDR504C MRPL3P36516 390 aa-0.75□□□□□ -2.53
SPG3YDR504C VTC1P40046 129 aaRIP-Chip data-0.75□□□□□ -2.53not detected
SPG3YDR504C SWT21P53873 357 aaPredicted RBP-0.75□□□□□ -2.53
SPG3YDR504C YLR162WQ06235 118 aa-0.75□□□□□ -2.53
SPG3YDR504C YLL007CQ07799 665 aa-0.75□□□□□ -2.53
SPG3YDR504C DCC1P25559 380 aa-0.76□□□□□ -2.53
SPG3YDR504C YMR007WQ03675 126 aa-0.76□□□□□ -2.53
SPG3YDR504C GPM3Q12326 303 aa-0.76□□□□□ -2.53
SPG3YDR504C POX1P13711 748 aa-0.77□□□□□ -2.53
SPG3YDR504C AVT2P39981 480 aa-0.77□□□□□ -2.53
SPG3YDR504C PEX12Q04370 399 aa-0.77□□□□□ -2.53
SPG3YDR504C OSM1P21375 501 aaKnown RBP-0.78□□□□□ -2.53
SPG3YDR504C YNL143CP53908 130 aa-0.78□□□□□ -2.53
SPG3YDR504C PRM15Q03262 622 aa-0.78□□□□□ -2.53
SPG3YDR504C YEL009C-AA0A023PZF2 135 aa-0.79□□□□□ -2.54
SPG3YDR504C NSP1P14907 823 aaKnown RBP-0.79□□□□□ -2.54
SPG3YDR504C ERD1P16151 362 aa-0.79□□□□□ -2.54
SPG3YDR504C FUR1P18562 216 aaKnown RBP-0.79□□□□□ -2.54
SPG3YDR504C YBL028CP38202 106 aa-0.79□□□□□ -2.54
SPG3YDR504C SPT8P38915 602 aa-0.79□□□□□ -2.54
SPG3YDR504C PRM10P42946 383 aa-0.79□□□□□ -2.54
SPG3YDR504C RMT2Q03305 412 aa-0.79□□□□□ -2.54
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms