RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeastyeast

Gene RPB7, Length 516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB7YDR404C DCC1P25559 380 aa3.81□□□□□ -1.8
RPB7YDR404C ERG9P29704 444 aa3.81□□□□□ -1.8
RPB7YDR404C DEG1P31115 442 aaKnown RBP3.81□□□□□ -1.8
RPB7YDR404C FUN26P31381 517 aa3.81□□□□□ -1.8
RPB7YDR404C HXT1P32465 570 aa3.81□□□□□ -1.8
RPB7YDR404C YKL070WP36087 169 aa3.81□□□□□ -1.8
RPB7YDR404C AVT2P39981 480 aa3.81□□□□□ -1.8
RPB7YDR404C PAN6P40459 309 aa3.81□□□□□ -1.8
RPB7YDR404C APC4Q04601 652 aa3.81□□□□□ -1.8
RPB7YDR404C RIF2Q06208 395 aa3.81□□□□□ -1.8
RPB7YDR404C UBA3Q99344 299 aa3.81□□□□□ -1.8
RPB7YDR404C STE2D6VTK4 431 aa3.8□□□□□ -1.8
RPB7YDR404C ASP3-2P0CX77 362 aa3.8□□□□□ -1.8
RPB7YDR404C ASP3-3P0CX78 362 aa3.8□□□□□ -1.8
RPB7YDR404C ASP3-4P0CX79 362 aa3.8□□□□□ -1.8
RPB7YDR404C ASP3-1P0CZ17 362 aa3.8□□□□□ -1.8
RPB7YDR404C MEK1P24719 497 aaPredicted RBP3.8□□□□□ -1.8
RPB7YDR404C RPL16AP26784 199 aaKnown RBP3.8□□□□□ -1.8
RPB7YDR404C NAM9P27929 486 aa3.8□□□□□ -1.8
RPB7YDR404C CYM1P32898 989 aa3.8□□□□□ -1.8
RPB7YDR404C TKL2P33315 681 aa3.8□□□□□ -1.8
RPB7YDR404C PTI1P39927 425 aaPredicted RBP3.8□□□□□ -1.8
RPB7YDR404C HEM14P40012 539 aa3.8□□□□□ -1.8
RPB7YDR404C INA22P40576 216 aa3.8□□□□□ -1.8
RPB7YDR404C GTO1P48239 356 aa3.8□□□□□ -1.8
RPB7YDR404C LSG1P53145 640 aaKnown RBP3.8□□□□□ -1.8
RPB7YDR404C REX2P54964 269 aaKnown RBP3.8□□□□□ -1.8
RPB7YDR404C GPM2Q12008 311 aa3.8□□□□□ -1.8
RPB7YDR404C RPS18AP0CX55 146 aaKnown RBP3.79□□□□□ -1.8
RPB7YDR404C RPS18BP0CX56 146 aaPredicted RBP3.79□□□□□ -1.8
RPB7YDR404C PET123P17558 318 aa3.79□□□□□ -1.8
RPB7YDR404C RPB5P20434 215 aa3.79□□□□□ -1.8
RPB7YDR404C CPR3P25719 182 aa3.79□□□□□ -1.8
RPB7YDR404C ARO2P28777 376 aaKnown RBP3.79□□□□□ -1.8
RPB7YDR404C ACB1P31787 87 aa3.79□□□□□ -1.8
RPB7YDR404C RPC25P35718 212 aa3.79□□□□□ -1.8
RPB7YDR404C YKR015CP36111 568 aa3.79□□□□□ -1.8
RPB7YDR404C SIP3P38717 1229 aa3.79□□□□□ -1.8
RPB7YDR404C SMF2P38778 549 aa3.79□□□□□ -1.8
RPB7YDR404C DSE1P40077 573 aa3.79□□□□□ -1.8
RPB7YDR404C EGT2P42835 1041 aa3.79□□□□□ -1.8
RPB7YDR404C MND1P53102 219 aa3.79□□□□□ -1.8
RPB7YDR404C MFG1Q07684 458 aa3.79□□□□□ -1.8
RPB7YDR404C FDH1Q08911 376 aa3.79□□□□□ -1.8
RPB7YDR404C SAM4Q08985 325 aaKnown RBP3.79□□□□□ -1.8
RPB7YDR404C TAF10Q12030 206 aa3.79□□□□□ -1.8
RPB7YDR404C YDL109CQ12103 647 aa3.79□□□□□ -1.8
RPB7YDR404C HEM4P06174 275 aa3.78□□□□□ -1.8
RPB7YDR404C RPL23AP0CX41 137 aaKnown RBP3.78□□□□□ -1.8
RPB7YDR404C RPL23BP0CX42 137 aaKnown RBP3.78□□□□□ -1.8
RPB7YDR404C DAL82P21705 255 aa3.78□□□□□ -1.8
RPB7YDR404C RBK1P25332 333 aa3.78□□□□□ -1.8
RPB7YDR404C ANR2P36090 516 aaPredicted RBP3.78□□□□□ -1.8
RPB7YDR404C PEX18P38855 283 aa3.78□□□□□ -1.8
RPB7YDR404C YFR057WP43625 151 aa3.78□□□□□ -1.8
RPB7YDR404C COQ5P49017 307 aa3.78□□□□□ -1.8
RPB7YDR404C BNS1P50084 137 aa3.78□□□□□ -1.8
RPB7YDR404C CLD1P53264 445 aa3.78□□□□□ -1.8
RPB7YDR404C SHY1P53266 389 aa3.78□□□□□ -1.8
RPB7YDR404C CRH1P53301 507 aa3.78□□□□□ -1.8
RPB7YDR404C YMR010WQ03687 405 aa3.78□□□□□ -1.8
RPB7YDR404C TRM82Q03774 444 aa3.78□□□□□ -1.8
RPB7YDR404C FUS2Q05670 677 aa3.78□□□□□ -1.8
RPB7YDR404C YHC1Q05900 231 aaKnown RBP3.78□□□□□ -1.8
RPB7YDR404C SLF1Q12034 447 aaKnown RBP3.78□□□□□ -1.8
RPB7YDR404C IZH2Q12442 317 aa3.78□□□□□ -1.8
RPB7YDR404C SEC16P48415 2195 aaKnown RBP3.78□□□□□ -1.81
RPB7YDR404C RPL5P26321 297 aaKnown RBP3.77□□□□□ -1.81
RPB7YDR404C ECT1P33412 323 aa3.77□□□□□ -1.81
RPB7YDR404C BMH2P34730 273 aaKnown RBP3.77□□□□□ -1.81
RPB7YDR404C ATG12P38316 186 aa3.77□□□□□ -1.81
RPB7YDR404C YNL208WP40159 199 aaKnown RBP3.77□□□□□ -1.81
RPB7YDR404C CIS3P47001 227 aa3.77□□□□□ -1.81
RPB7YDR404C BIR1P47134 954 aa3.77□□□□□ -1.81
RPB7YDR404C MKC7P53379 596 aa3.77□□□□□ -1.81
RPB7YDR404C YNL260CP53846 198 aa3.77□□□□□ -1.81
RPB7YDR404C SWS2P53937 143 aa3.77□□□□□ -1.81
RPB7YDR404C KAP95Q06142 861 aaKnown RBP3.77□□□□□ -1.81
RPB7YDR404C IRC25Q07951 179 aa3.77□□□□□ -1.81
RPB7YDR404C LDB17Q12342 491 aa3.77□□□□□ -1.81
RPB7YDR404C JID1Q12350 301 aa3.77□□□□□ -1.81
RPB7YDR404C RPN6Q12377 434 aa3.77□□□□□ -1.81
RPB7YDR404C NAG1Q8TGN9 163 aa3.77□□□□□ -1.81
RPB7YDR404C IPP1P00817 287 aaKnown RBP3.76□□□□□ -1.81
RPB7YDR404C PHO2P07269 559 aa3.76□□□□□ -1.81
RPB7YDR404C SSA3P09435 649 aaKnown RBP3.76□□□□□ -1.81
RPB7YDR404C FRS2P15625 503 aaKnown RBP3.76□□□□□ -1.81
RPB7YDR404C GPI12P23797 304 aa3.76□□□□□ -1.81
RPB7YDR404C ITR2P30606 609 aa3.76□□□□□ -1.81
RPB7YDR404C DTR1P38125 572 aa3.76□□□□□ -1.81
RPB7YDR404C RCK2P38623 610 aa3.76□□□□□ -1.81
RPB7YDR404C FHL1P39521 936 aa3.76□□□□□ -1.81
RPB7YDR404C SER33P40510 469 aa3.76□□□□□ -1.81
RPB7YDR404C ATG18P43601 500 aa3.76□□□□□ -1.81
RPB7YDR404C NOP13P53883 403 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
RPB7YDR404C CMS1Q07897 291 aaKnown RBP3.76□□□□□ -1.81
RPB7YDR404C FRE8Q12209 686 aa3.76□□□□□ -1.81
RPB7YDR404C MCT1Q12283 360 aa3.76□□□□□ -1.81
RPB7YDR404C FMP16Q12497 93 aa3.76□□□□□ -1.81
RPB7YDR404C SAL1D6W196 494 aa3.75□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms