RNA–Protein interactions for RNA: YDR351W

SBE2, Transcript of Protein required for bud growth, yeast

Gene SBE2, Length 2,595 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SBE2	YDR351W	MTC4	P38335	694 aa	Known RBP	4.09	□□□□□ -1.75
SBE2	YDR351W	CIN4	P39110	191 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	YER076C	P40049	302 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	YFL040W	P43562	540 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	NUP57	P48837	541 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	IMD3	P50095	523 aa	Known RBP	4.09	□□□□□ -1.75
SBE2	YDR351W	FHN1	P53279	174 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	MRPL22	P53881	309 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	SIZ1	Q04195	904 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	NAT4	Q04751	285 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	ARC18	Q05933	178 aa	Known RBP	4.09	□□□□□ -1.75
SBE2	YDR351W	RAX2	Q12465	1220 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	GAL10	P04397	699 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	HCM1	P25364	564 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	SKN1	P33336	771 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	NNK1	P36003	928 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	TRM7	P38238	310 aa	Known RBP	4.08	□□□□□ -1.76
SBE2	YDR351W	CUE1	P38428	203 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	NVJ1	P38881	321 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	RRG9	P40156	214 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	GLC8	P41818	229 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	BRR6	P53062	197 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	POP6	P53218	158 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	TMN2	Q04562	672 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	ECI1	Q05871	280 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	ERP3	Q12403	225 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	SLO1	Q3E784	85 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	RIB3	Q99258	208 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	YOR1	P53049	1477 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	YCR023C	P25351	611 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	THI80	P35202	319 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	PHD1	P36093	366 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	SWD2	P36104	329 aa	Predicted RBP	4.08	□□□□□ -1.76
SBE2	YDR351W	YBR137W	P38276	179 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	YBR220C	P38318	560 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	MAM33	P40513	266 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	UBC11	P52492	156 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	COX18	P53239	316 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	SWP1	Q02795	286 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	SDH7	Q04401	133 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	PBP4	Q07362	185 aa	Known RBP	4.08	□□□□□ -1.76
SBE2	YDR351W	YOL159C	Q08300	171 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	PSF1	Q12488	208 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	YKL033W-A	Q86ZR7	236 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	YGL041W-A	P0C5N3	154 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	HOM6	P31116	359 aa	Known RBP	4.08	□□□□□ -1.76
SBE2	YDR351W	HES1	P35843	434 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	TDA11	P38854	504 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	MET30	P39014	640 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	SHO1	P40073	367 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	PTR3	P43606	678 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	OST3	P48439	350 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	TPN1	P53099	579 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	YDR209C	Q03480	137 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	TEN1	Q07921	160 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	YPQ1	Q12010	308 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	NCE102	Q12207	173 aa	RIP-Chip data	4.08	□□□□□ -1.76	not detected
SBE2	YDR351W	PST2	Q12335	198 aa	Known RBP	4.08	□□□□□ -1.76
SBE2	YDR351W	YOP1	Q12402	180 aa		4.08	□□□□□ -1.76
SBE2	YDR351W	AI3	P03877	415 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	OPI3	P05375	206 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	PHO80	P20052	293 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	MRPS28	P21771	286 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	OCH1	P31755	480 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	ACB1	P31787	87 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	ARO7	P32178	256 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	HYM1	P32464	399 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	SPS18	P32572	300 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	RPL32	P38061	130 aa	Known RBP	4.07	□□□□□ -1.76
SBE2	YDR351W	PHM8	P40025	321 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	PDS1	P40316	373 aa	Predicted RBP	4.07	□□□□□ -1.76
SBE2	YDR351W	FAR7	P43592	221 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	BIR1	P47134	954 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	SOK2	P53438	785 aa	Predicted RBP	4.07	□□□□□ -1.76
SBE2	YDR351W	ACT1	P60010	375 aa	Known RBP	4.07	□□□□□ -1.76
SBE2	YDR351W	NAM8	Q00539	523 aa	Known RBP	4.07	□□□□□ -1.76
SBE2	YDR351W	SLU7	Q02775	382 aa	Known RBP	4.07	□□□□□ -1.76
SBE2	YDR351W	YPL077C	Q02831	240 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	NHP10	Q03435	203 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	ATG34	Q12292	412 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	Q0010	Q9ZZX9	128 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	TYR1	P20049	452 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	EPT1	P22140	391 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	YEF1	P32622	495 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	CBP4	P37267	147 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	GET2	P40056	285 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	YIL067C	P40514	678 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	SAS2	P40963	338 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	YCH1	P42937	148 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	USE1	P53146	245 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	YDR249C	Q03787	373 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	YMR166C	Q03829	368 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	YDR391C	Q04170	232 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	PRP11	Q07350	266 aa	Predicted RBP	4.07	□□□□□ -1.76
SBE2	YDR351W	SRL2	Q12020	392 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	YCT1	Q12235	531 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	LCB4	Q12246	624 aa		4.07	□□□□□ -1.76
SBE2	YDR351W	SNU23	Q12368	194 aa	Predicted RBP	4.07	□□□□□ -1.76
SBE2	YDR351W	HRP1	Q99383	534 aa	Known RBP	4.07	□□□□□ -1.76
SBE2	YDR351W	TPK3	P05986	398 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms