RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W RPL10P41805 221 aaKnown RBP1.2□□□□□ -2.22
MSN5YDR335W GUF1P46943 645 aa1.2□□□□□ -2.22
MSN5YDR335W ORC5P50874 479 aa1.2□□□□□ -2.22
MSN5YDR335W YIP1P53039 248 aa1.2□□□□□ -2.22
MSN5YDR335W SOL4P53315 255 aa1.2□□□□□ -2.22
MSN5YDR335W NRM1P53718 249 aa1.2□□□□□ -2.22
MSN5YDR335W GOR1P53839 350 aa1.2□□□□□ -2.22
MSN5YDR335W PRP38Q00723 242 aaPredicted RBP1.2□□□□□ -2.22
MSN5YDR335W YML122CQ03207 126 aa1.2□□□□□ -2.22
MSN5YDR335W INM2Q05533 292 aa1.2□□□□□ -2.22
MSN5YDR335W YPL272CQ08984 517 aa1.2□□□□□ -2.22
MSN5YDR335W TPT1Q12272 230 aaKnown RBP1.2□□□□□ -2.22
MSN5YDR335W YBL111CQ3E7Y5 667 aa1.2□□□□□ -2.22
MSN5YDR335W BRR1Q99177 341 aaPredicted RBP1.2□□□□□ -2.22
MSN5YDR335W DUR1,2P32528 1835 aaKnown RBP1.19□□□□□ -2.22
MSN5YDR335W LYS2P07702 1392 aa1.19□□□□□ -2.22
MSN5YDR335W NAM2P11325 894 aa1.19□□□□□ -2.22
MSN5YDR335W GLN3P18494 730 aa1.19□□□□□ -2.22
MSN5YDR335W RRT12P25381 491 aa1.19□□□□□ -2.22
MSN5YDR335W YCR100CP25606 316 aa1.19□□□□□ -2.22
MSN5YDR335W MKK1P32490 508 aa1.19□□□□□ -2.22
MSN5YDR335W MRPS5P33759 307 aa1.19□□□□□ -2.22
MSN5YDR335W ECM15P35195 104 aa1.19□□□□□ -2.22
MSN5YDR335W PHD1P36093 366 aa1.19□□□□□ -2.22
MSN5YDR335W YBR241CP38142 488 aa1.19□□□□□ -2.22
MSN5YDR335W CUE1P38428 203 aa1.19□□□□□ -2.22
MSN5YDR335W GRE3P38715 327 aaKnown RBP RIP-Chip data1.19□□□□□ -2.22not detected
MSN5YDR335W CIN2P46670 268 aa1.19□□□□□ -2.22
MSN5YDR335W NCA3P46955 337 aa1.19□□□□□ -2.22
MSN5YDR335W ARP10Q04549 284 aa1.19□□□□□ -2.22
MSN5YDR335W CDC123Q05791 360 aa1.19□□□□□ -2.22
MSN5YDR335W NDL1Q06568 189 aa1.19□□□□□ -2.22
MSN5YDR335W GAT3Q07928 141 aa1.19□□□□□ -2.22
MSN5YDR335W APC9Q12107 265 aa1.19□□□□□ -2.22
MSN5YDR335W YLR126CQ12288 251 aa1.19□□□□□ -2.22
MSN5YDR335W SNU23Q12368 194 aaPredicted RBP1.19□□□□□ -2.22
MSN5YDR335W YPL119C-AQ3E751 87 aa1.19□□□□□ -2.22
MSN5YDR335W SPT3P06844 337 aa1.19□□□□□ -2.22
MSN5YDR335W AGA1P32323 725 aa1.19□□□□□ -2.22
MSN5YDR335W CAF4P36130 643 aa1.19□□□□□ -2.22
MSN5YDR335W MRX3P38172 270 aa1.19□□□□□ -2.22
MSN5YDR335W RFT1P38206 574 aaPredicted RBP1.19□□□□□ -2.22
MSN5YDR335W YPC1P38298 316 aa1.19□□□□□ -2.22
MSN5YDR335W SDS24P38314 527 aa1.19□□□□□ -2.22
MSN5YDR335W ERV46P39727 415 aa1.19□□□□□ -2.22
MSN5YDR335W VAB2P40003 282 aa1.19□□□□□ -2.22
MSN5YDR335W DSN1P40568 576 aa1.19□□□□□ -2.22
MSN5YDR335W YGL204CP53089 101 aa1.19□□□□□ -2.22
MSN5YDR335W COG7P53195 279 aa1.19□□□□□ -2.22
MSN5YDR335W LST7P53237 242 aa1.19□□□□□ -2.22
MSN5YDR335W SNX41Q04053 625 aa1.19□□□□□ -2.22
MSN5YDR335W YEH2Q07950 538 aa1.19□□□□□ -2.22
MSN5YDR335W SNX3Q08826 162 aaKnown RBP1.19□□□□□ -2.22
MSN5YDR335W RIO1Q12196 484 aaKnown RBP1.19□□□□□ -2.22
MSN5YDR335W YLR108CQ12259 485 aa1.19□□□□□ -2.22
MSN5YDR335W WTM1Q12363 437 aaKnown RBP1.19□□□□□ -2.22
MSN5YDR335W AIM45Q12480 344 aaKnown RBP1.19□□□□□ -2.22
MSN5YDR335W SEC22P22214 214 aa1.19□□□□□ -2.22
MSN5YDR335W URE2P23202 354 aaKnown RBP1.19□□□□□ -2.22
MSN5YDR335W RPS5P26783 225 aaKnown RBP1.19□□□□□ -2.22
MSN5YDR335W QRI5P32344 111 aa1.19□□□□□ -2.22
MSN5YDR335W CSG2P35206 410 aa1.19□□□□□ -2.22
MSN5YDR335W SRP102P36057 244 aaPredicted RBP1.19□□□□□ -2.22
MSN5YDR335W ANR2P36090 516 aaPredicted RBP1.19□□□□□ -2.22
MSN5YDR335W FLO10P36170 1169 aa1.19□□□□□ -2.22
MSN5YDR335W RRP3P38712 501 aaKnown RBP1.19□□□□□ -2.22
MSN5YDR335W PEX22P39718 180 aa1.19□□□□□ -2.22
MSN5YDR335W VPS52P39904 641 aa1.19□□□□□ -2.22
MSN5YDR335W JLP2P40206 208 aa1.19□□□□□ -2.22
MSN5YDR335W SLM1P40485 686 aa1.19□□□□□ -2.22
MSN5YDR335W YJR149WP47177 404 aa1.19□□□□□ -2.22
MSN5YDR335W NIF3P53081 288 aa1.19□□□□□ -2.22
MSN5YDR335W CDH1P53197 566 aa1.19□□□□□ -2.22
MSN5YDR335W SNO1Q03144 224 aa1.19□□□□□ -2.22
MSN5YDR335W SNT309Q06091 175 aaPredicted RBP1.19□□□□□ -2.22
MSN5YDR335W YLR112WQ12130 139 aa1.19□□□□□ -2.22
MSN5YDR335W YOP1Q12402 180 aa1.19□□□□□ -2.22
MSN5YDR335W HTZ1Q12692 134 aaKnown RBP1.19□□□□□ -2.22
MSN5YDR335W DET1Q99288 334 aaKnown RBP1.19□□□□□ -2.22
MSN5YDR335W IGO2Q9P305 131 aa1.19□□□□□ -2.22
MSN5YDR335W PET494P07390 489 aaPredicted RBP1.18□□□□□ -2.22
MSN5YDR335W AQY1P0CD91 305 aa1.18□□□□□ -2.22
MSN5YDR335W CHA1P25379 360 aaKnown RBP1.18□□□□□ -2.22
MSN5YDR335W MUD1P32605 298 aaKnown RBP1.18□□□□□ -2.22
MSN5YDR335W SUR2P38992 349 aa1.18□□□□□ -2.22
MSN5YDR335W YIR016WP40572 265 aa1.18□□□□□ -2.22
MSN5YDR335W GLG2P47011 380 aa1.18□□□□□ -2.22
MSN5YDR335W HAM1P47119 197 aaKnown RBP1.18□□□□□ -2.22
MSN5YDR335W YDL186WP48568 277 aa1.18□□□□□ -2.22
MSN5YDR335W TRM9P49957 279 aa1.18□□□□□ -2.22
MSN5YDR335W TOS2P50078 622 aa1.18□□□□□ -2.22
MSN5YDR335W IMD3P50095 523 aaKnown RBP1.18□□□□□ -2.22
MSN5YDR335W YPS5P53057 165 aa1.18□□□□□ -2.22
MSN5YDR335W CPR8P53728 308 aa1.18□□□□□ -2.22
MSN5YDR335W GPI15P53961 229 aa1.18□□□□□ -2.22
MSN5YDR335W SKI8Q02793 397 aaPredicted RBP1.18□□□□□ -2.22
MSN5YDR335W SRL4Q03085 281 aa1.18□□□□□ -2.22
MSN5YDR335W YML096WQ04489 525 aa1.18□□□□□ -2.22
MSN5YDR335W SEC13Q04491 297 aaKnown RBP1.18□□□□□ -2.22
MSN5YDR335W NDE2Q07500 545 aa1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms